RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 PDE4DIPQ5VU43 2346 aa26.16■■□□□ 1.78
CD58-204ENST00000464088 RAD17O75943 681 aa26.16■■□□□ 1.78
CD58-204ENST00000464088 PANK1Q8TE04 598 aa26.16■■□□□ 1.78
CD58-204ENST00000464088 CELF1Q92879 486 aaKnown RBP26.16■■□□□ 1.78
CD58-204ENST00000464088 GREM2Q9H772 168 aa26.16■■□□□ 1.78
CD58-204ENST00000464088 LRRC37AA6NMS7 1700 aa26.14■■□□□ 1.78
CD58-204ENST00000464088 YDJCA8MPS7 323 aa26.14■■□□□ 1.78
CD58-204ENST00000464088 MS4A1P11836 297 aa26.14■■□□□ 1.78
CD58-204ENST00000464088 HUNKP57058 714 aa26.14■■□□□ 1.78
CD58-204ENST00000464088 RABL6Q3YEC7 729 aaPredicted RBP26.14■■□□□ 1.78
CD58-204ENST00000464088 SAGE1Q9NXZ1 904 aa26.14■■□□□ 1.78
CD58-204ENST00000464088 DUOX1Q9NRD9 1551 aa26.14■■□□□ 1.78
CD58-204ENST00000464088 POLR2AP24928 1970 aaKnown RBP26.14■■□□□ 1.77
CD58-204ENST00000464088 FAM155AB1AL88 458 aaPredicted RBP26.13■■□□□ 1.77
CD58-204ENST00000464088 H7C1D1 291 aa26.13■■□□□ 1.77
CD58-204ENST00000464088 UBTFL1P0CB47 393 aaPredicted RBP26.13■■□□□ 1.77
CD58-204ENST00000464088 LMBR1LQ6UX01 489 aa26.13■■□□□ 1.77
CD58-204ENST00000464088 USP48Q86UV5 1035 aa26.13■■□□□ 1.77
CD58-204ENST00000464088 ANKRD44Q8N8A2 993 aa26.13■■□□□ 1.77
CD58-204ENST00000464088 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.13■■□□□ 1.77
CD58-204ENST00000464088 DPF2Q92785 391 aa26.13■■□□□ 1.77
CD58-204ENST00000464088 BICC1Q9H694 974 aaKnown RBP26.13■■□□□ 1.77
CD58-204ENST00000464088 SHTN1A0MZ66 631 aa26.12■■□□□ 1.77
CD58-204ENST00000464088 GNAI3P08754 354 aa26.11■■□□□ 1.77
CD58-204ENST00000464088 RPS8P62241 208 aaKnown RBP26.11■■□□□ 1.77
CD58-204ENST00000464088 PDE3AQ14432 1141 aa26.11■■□□□ 1.77
CD58-204ENST00000464088 ITPRIPQ8IWB1 547 aa26.11■■□□□ 1.77
CD58-204ENST00000464088 MICALL2Q8IY33 904 aa26.11■■□□□ 1.77
CD58-204ENST00000464088 SPEF2Q9C093 1822 aa26.11■■□□□ 1.77
CD58-204ENST00000464088 ITGA6P23229 1130 aa26.1■■□□□ 1.77
CD58-204ENST00000464088 C20orf194Q5TEA3 1177 aa26.1■■□□□ 1.77
CD58-204ENST00000464088 RGMBQ6NW40 437 aa26.1■■□□□ 1.77
CD58-204ENST00000464088 TMC4Q7Z404 712 aa26.1■■□□□ 1.77
CD58-204ENST00000464088 AKAP11Q9UKA4 1901 aa26.1■■□□□ 1.77
CD58-204ENST00000464088 ZBTB7BO15156 539 aaPredicted RBP26.09■■□□□ 1.77
CD58-204ENST00000464088 RRP1P56182 461 aaKnown RBP26.09■■□□□ 1.77
CD58-204ENST00000464088 CDC5LQ99459 802 aaKnown RBP26.09■■□□□ 1.77
CD58-204ENST00000464088 MVPQ14764 893 aaKnown RBP26.08■■□□□ 1.77
CD58-204ENST00000464088 DLK2Q6UY11 383 aa26.08■■□□□ 1.77
CD58-204ENST00000464088 CCDC102AQ96A19 550 aa26.08■■□□□ 1.77
CD58-204ENST00000464088 HDAC5Q9UQL6 1122 aa26.08■■□□□ 1.77
CD58-204ENST00000464088 LRRFIP2Q9Y608 721 aaKnown RBP26.08■■□□□ 1.77
CD58-204ENST00000464088 SAMD7Q7Z3H4 446 aa26.07■■□□□ 1.76
CD58-204ENST00000464088 ANKRD18AQ8IVF6 992 aa26.07■■□□□ 1.76
CD58-204ENST00000464088 GBA2Q9HCG7 927 aaPredicted RBP26.07■■□□□ 1.76
CD58-204ENST00000464088 ANKRD18BA2A2Z9 1011 aa26.06■■□□□ 1.76
CD58-204ENST00000464088 IFIT5Q13325 482 aaKnown RBP26.06■■□□□ 1.76
CD58-204ENST00000464088 KRT26Q7Z3Y9 468 aa26.06■■□□□ 1.76
CD58-204ENST00000464088 C2orf69Q8N8R5 385 aa26.06■■□□□ 1.76
CD58-204ENST00000464088 COG6Q9Y2V7 657 aa26.06■■□□□ 1.76
CD58-204ENST00000464088 ZBTB12Q9Y330 459 aaPredicted RBP26.06■■□□□ 1.76
CD58-204ENST00000464088 CHMP3Q9Y3E7 222 aa26.06■■□□□ 1.76
CD58-204ENST00000464088 PSMD14O00487 310 aa26.05■■□□□ 1.76
CD58-204ENST00000464088 KIF23Q02241 960 aaPredicted RBP26.05■■□□□ 1.76
CD58-204ENST00000464088 RPS12P25398 132 aaKnown RBP26.04■■□□□ 1.76
CD58-204ENST00000464088 CCDC57Q2TAC2 916 aa26.04■■□□□ 1.76
CD58-204ENST00000464088 BSDC1Q9NW68 430 aaPredicted RBP26.04■■□□□ 1.76
CD58-204ENST00000464088 RNF186Q9NXI6 227 aa26.04■■□□□ 1.76
CD58-204ENST00000464088 EGFRP00533 1210 aa26.03■■□□□ 1.76
CD58-204ENST00000464088 GNAI2P04899 355 aa26.03■■□□□ 1.76
CD58-204ENST00000464088 WASHC4Q2M389 1173 aa26.03■■□□□ 1.76
CD58-204ENST00000464088 IGHMBP2P38935 993 aaKnown RBP26.02■■□□□ 1.76
CD58-204ENST00000464088 RFX5P48382 616 aaPredicted RBP26.02■■□□□ 1.76
CD58-204ENST00000464088 ZNF157P51786 506 aaPredicted RBP26.02■■□□□ 1.76
CD58-204ENST00000464088 TBC1D10BQ4KMP7 808 aaPredicted RBP26.02■■□□□ 1.76
CD58-204ENST00000464088 DCPSQ96C86 337 aaKnown RBP26.02■■□□□ 1.76
CD58-204ENST00000464088 DDX19BQ9UMR2 479 aa26.02■■□□□ 1.76
CD58-204ENST00000464088 A0A1B0GUL6 1792 aa26.01■■□□□ 1.75
CD58-204ENST00000464088 TRPA1O75762 1119 aa26.01■■□□□ 1.75
CD58-204ENST00000464088 SOX10P56693 466 aa26.01■■□□□ 1.75
CD58-204ENST00000464088 MTX1Q13505 466 aa26.01■■□□□ 1.75
CD58-204ENST00000464088 ZNF594Q96JF6 807 aaPredicted RBP26.01■■□□□ 1.75
CD58-204ENST00000464088 ADM5C9JUS6 153 aa26■■□□□ 1.75
CD58-204ENST00000464088 SLC10A3P09131 477 aa26■■□□□ 1.75
CD58-204ENST00000464088 GPSM2P81274 684 aa26■■□□□ 1.75
CD58-204ENST00000464088 DBNDD1Q9H9R9 158 aa26■■□□□ 1.75
CD58-204ENST00000464088 CSRNP1Q96S65 589 aa25.99■■□□□ 1.75
CD58-204ENST00000464088 MPHOSPH8Q99549 860 aa25.99■■□□□ 1.75
CD58-204ENST00000464088 MINPP1Q9UNW1 487 aa25.99■■□□□ 1.75
CD58-204ENST00000464088 REM2Q8IYK8 340 aaPredicted RBP25.98■■□□□ 1.75
CD58-204ENST00000464088 C1orf115Q9H7X2 142 aa25.98■■□□□ 1.75
CD58-204ENST00000464088 ZBTB40Q9NUA8 1239 aa25.98■■□□□ 1.75
CD58-204ENST00000464088 PODXL2Q9NZ53 605 aa25.98■■□□□ 1.75
CD58-204ENST00000464088 POLLQ9UGP5 575 aa25.98■■□□□ 1.75
CD58-204ENST00000464088 NSFL1CQ9UNZ2 370 aaKnown RBP25.98■■□□□ 1.75
CD58-204ENST00000464088 CTU1Q7Z7A3 348 aaKnown RBP25.97■■□□□ 1.75
CD58-204ENST00000464088 SCN9AQ15858 1988 aa25.96■■□□□ 1.75
CD58-204ENST00000464088 PTPN12Q05209 780 aaKnown RBP25.96■■□□□ 1.75
CD58-204ENST00000464088 TAF7LQ5H9L4 462 aa25.96■■□□□ 1.75
CD58-204ENST00000464088 PRPF38BQ5VTL8 546 aaKnown RBP25.96■■□□□ 1.75
CD58-204ENST00000464088 KLHDC4Q8TBB5 520 aa25.96■■□□□ 1.75
CD58-204ENST00000464088 KCNQ5Q9NR82 932 aa25.96■■□□□ 1.75
CD58-204ENST00000464088 SUPT16HQ9Y5B9 1047 aaKnown RBP25.96■■□□□ 1.75
CD58-204ENST00000464088 ECE2O60344 883 aa25.95■■□□□ 1.74
CD58-204ENST00000464088 RBM26Q5T8P6 1007 aaKnown RBP25.95■■□□□ 1.74
CD58-204ENST00000464088 LDHAL6AQ6ZMR3 332 aa25.95■■□□□ 1.74
CD58-204ENST00000464088 PUS3Q9BZE2 481 aaKnown RBP25.95■■□□□ 1.74
CD58-204ENST00000464088 XDHP47989 1333 aa25.94■■□□□ 1.74
CD58-204ENST00000464088 PNMA6EA0A0J9YXQ4 647 aa25.94■■□□□ 1.74
CD58-204ENST00000464088 RIMBP2O15034 1052 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms