RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 EPS15P42566 896 aa22.09■■□□□ 1.13
VPS52-214ENST00000463486 UBE4AQ14139 1066 aa22.09■■□□□ 1.13
VPS52-214ENST00000463486 COA1Q9GZY4 146 aa22.09■■□□□ 1.13
VPS52-214ENST00000463486 FBXO3Q9UK99 471 aa22.09■■□□□ 1.13
VPS52-214ENST00000463486 SRGAP3O43295 1099 aa22.08■■□□□ 1.13
VPS52-214ENST00000463486 CIAO1O76071 339 aa22.08■■□□□ 1.13
VPS52-214ENST00000463486 PDE8BO95263 885 aa22.08■■□□□ 1.13
VPS52-214ENST00000463486 MVPQ14764 893 aaKnown RBP22.08■■□□□ 1.13
VPS52-214ENST00000463486 GPRC5DQ9NZD1 345 aa22.08■■□□□ 1.13
VPS52-214ENST00000463486 ZBTB12Q9Y330 459 aaPredicted RBP22.08■■□□□ 1.13
VPS52-214ENST00000463486 FGFR2P21802 821 aa22.07■■□□□ 1.12
VPS52-214ENST00000463486 EPHX2P34913 555 aa22.07■■□□□ 1.12
VPS52-214ENST00000463486 KCNJ4P48050 445 aa22.07■■□□□ 1.12
VPS52-214ENST00000463486 PDE3AQ14432 1141 aa22.07■■□□□ 1.12
VPS52-214ENST00000463486 METTL24Q5JXM2 366 aa22.07■■□□□ 1.12
VPS52-214ENST00000463486 GMLQ99445 158 aa22.07■■□□□ 1.12
VPS52-214ENST00000463486 C1orf115Q9H7X2 142 aa22.07■■□□□ 1.12
VPS52-214ENST00000463486 COG6Q9Y2V7 657 aa22.07■■□□□ 1.12
VPS52-214ENST00000463486 ZNF646O15015 1829 aaPredicted RBP22.07■■□□□ 1.12
VPS52-214ENST00000463486 SHTN1A0MZ66 631 aa22.06■■□□□ 1.12
VPS52-214ENST00000463486 ATP8B2P98198 1209 aa22.06■■□□□ 1.12
VPS52-214ENST00000463486 POLA2Q14181 598 aa22.06■■□□□ 1.12
VPS52-214ENST00000463486 DPF2Q92785 391 aa22.06■■□□□ 1.12
VPS52-214ENST00000463486 SIL1Q9H173 461 aa22.06■■□□□ 1.12
VPS52-214ENST00000463486 CD209Q9NNX6 404 aa22.06■■□□□ 1.12
VPS52-214ENST00000463486 PSME4Q14997 1843 aa22.06■■□□□ 1.12
VPS52-214ENST00000463486 ZNF609O15014 1411 aa22.06■■□□□ 1.12
VPS52-214ENST00000463486 ADAMTSL1Q8N6G6 1762 aa22.05■■□□□ 1.12
VPS52-214ENST00000463486 IL1R1P14778 569 aa22.05■■□□□ 1.12
VPS52-214ENST00000463486 DACT2Q5SW24 774 aa22.05■■□□□ 1.12
VPS52-214ENST00000463486 SSH3Q8TE77 659 aa22.05■■□□□ 1.12
VPS52-214ENST00000463486 FAM84BQ96KN1 310 aaPredicted RBP22.05■■□□□ 1.12
VPS52-214ENST00000463486 ZBTB40Q9NUA8 1239 aa22.05■■□□□ 1.12
VPS52-214ENST00000463486 G3V3G9 751 aa22.04■■□□□ 1.12
VPS52-214ENST00000463486 DCAF8Q5TAQ9 597 aa22.04■■□□□ 1.12
VPS52-214ENST00000463486 C16orf71Q8IYS4 520 aaPredicted RBP22.04■■□□□ 1.12
VPS52-214ENST00000463486 USP17L3A6NCW0 530 aa22.03■■□□□ 1.12
VPS52-214ENST00000463486 USP17L4A6NCW7 530 aa22.03■■□□□ 1.12
VPS52-214ENST00000463486 RPS12P25398 132 aaKnown RBP22.03■■□□□ 1.12
VPS52-214ENST00000463486 IL15P40933 162 aaPredicted RBP22.03■■□□□ 1.12
VPS52-214ENST00000463486 RSBN1LQ6PCB5 846 aaPredicted RBP22.03■■□□□ 1.12
VPS52-214ENST00000463486 USP17L1Q7RTZ2 530 aa22.03■■□□□ 1.12
VPS52-214ENST00000463486 FBXO33Q7Z6M2 555 aa22.03■■□□□ 1.12
VPS52-214ENST00000463486 CNOT7Q9UIV1 285 aaKnown RBP22.03■■□□□ 1.12
VPS52-214ENST00000463486 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.03■■□□□ 1.12
VPS52-214ENST00000463486 LMOD1P29536 600 aaPredicted RBP22.02■■□□□ 1.12
VPS52-214ENST00000463486 GYG1P46976 350 aa22.02■■□□□ 1.12
VPS52-214ENST00000463486 HIRAP54198 1017 aaPredicted RBP22.02■■□□□ 1.12
VPS52-214ENST00000463486 FSTL1Q12841 308 aa22.02■■□□□ 1.12
VPS52-214ENST00000463486 STRIP1Q5VSL9 837 aa22.02■■□□□ 1.12
VPS52-214ENST00000463486 PNMA8AQ86V59 439 aaPredicted RBP22.02■■□□□ 1.12
VPS52-214ENST00000463486 MXD3Q9BW11 206 aa22.02■■□□□ 1.12
VPS52-214ENST00000463486 ADARB2Q9NS39 739 aaKnown RBP22.02■■□□□ 1.12
VPS52-214ENST00000463486 DDX19BQ9UMR2 479 aa22.02■■□□□ 1.12
VPS52-214ENST00000463486 PUM3Q15397 648 aaKnown RBP22.01■■□□□ 1.11
VPS52-214ENST00000463486 CEP85Q6P2H3 762 aa22.01■■□□□ 1.11
VPS52-214ENST00000463486 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.01■■□□□ 1.11
VPS52-214ENST00000463486 SMC1BQ8NDV3 1235 aa22.01■■□□□ 1.11
VPS52-214ENST00000463486 AGBL3Q8NEM8 1001 aa22.01■■□□□ 1.11
VPS52-214ENST00000463486 TDRD7Q8NHU6 1098 aaKnown RBP22.01■■□□□ 1.11
VPS52-214ENST00000463486 EGFRP00533 1210 aa22■■□□□ 1.11
VPS52-214ENST00000463486 CHADLQ6NUI6 762 aa22■■□□□ 1.11
VPS52-214ENST00000463486 USP50Q70EL3 339 aaPredicted RBP22■■□□□ 1.11
VPS52-214ENST00000463486 ZNF804AQ7Z570 1209 aa22■■□□□ 1.11
VPS52-214ENST00000463486 LDHDQ86WU2 507 aa22■■□□□ 1.11
VPS52-214ENST00000463486 MICALL2Q8IY33 904 aa22■■□□□ 1.11
VPS52-214ENST00000463486 CEP350Q5VT06 3117 aa22■■□□□ 1.11
VPS52-214ENST00000463486 HIBADHP31937 336 aaKnown RBP21.99■■□□□ 1.11
VPS52-214ENST00000463486 ZNF280AP59817 542 aaPredicted RBP21.99■■□□□ 1.11
VPS52-214ENST00000463486 GTF2IP78347 998 aa21.99■■□□□ 1.11
VPS52-214ENST00000463486 EAPPQ56P03 285 aaPredicted RBP21.99■■□□□ 1.11
VPS52-214ENST00000463486 TTLL5Q6EMB2 1281 aa21.99■■□□□ 1.11
VPS52-214ENST00000463486 CERS5Q8N5B7 392 aa21.99■■□□□ 1.11
VPS52-214ENST00000463486 TRPM4Q8TD43 1214 aa21.99■■□□□ 1.11
VPS52-214ENST00000463486 LPIN2Q92539 896 aa21.99■■□□□ 1.11
VPS52-214ENST00000463486 CEP126Q9P2H0 1117 aa21.99■■□□□ 1.11
VPS52-214ENST00000463486 SASH1O94885 1247 aa21.98■■□□□ 1.11
VPS52-214ENST00000463486 RRP1P56182 461 aaKnown RBP21.98■■□□□ 1.11
VPS52-214ENST00000463486 SIRT2Q8IXJ6 389 aa21.98■■□□□ 1.11
VPS52-214ENST00000463486 PGAP2Q9UHJ9 254 aa21.98■■□□□ 1.11
VPS52-214ENST00000463486 NOP58Q9Y2X3 529 aaKnown RBP21.98■■□□□ 1.11
VPS52-214ENST00000463486 ITGBL1O95965 494 aaPredicted RBP21.97■■□□□ 1.11
VPS52-214ENST00000463486 BCAMP50895 628 aa21.97■■□□□ 1.11
VPS52-214ENST00000463486 TFCP2Q12800 502 aa21.97■■□□□ 1.11
VPS52-214ENST00000463486 SAMD7Q7Z3H4 446 aa21.97■■□□□ 1.11
VPS52-214ENST00000463486 FAM205AQ6ZU69 1335 aa21.97■■□□□ 1.11
VPS52-214ENST00000463486 H7C1D1 291 aa21.96■■□□□ 1.11
VPS52-214ENST00000463486 ATP2B3Q16720 1220 aa21.96■■□□□ 1.11
VPS52-214ENST00000463486 IFIT1P09914 478 aaKnown RBP21.95■■□□□ 1.1
VPS52-214ENST00000463486 USP17L8P0C7I0 530 aa21.95■■□□□ 1.1
VPS52-214ENST00000463486 SLC5A1P13866 664 aa21.94■■□□□ 1.1
VPS52-214ENST00000463486 HSPA6P17066 643 aa21.94■■□□□ 1.1
VPS52-214ENST00000463486 TIMM10P62072 90 aa21.94■■□□□ 1.1
VPS52-214ENST00000463486 FKBP1AP62942 108 aaKnown RBP21.94■■□□□ 1.1
VPS52-214ENST00000463486 TBC1D10BQ4KMP7 808 aaPredicted RBP21.94■■□□□ 1.1
VPS52-214ENST00000463486 MAP1SQ66K74 1059 aaPredicted RBP21.94■■□□□ 1.1
VPS52-214ENST00000463486 ADORA1P30542 326 aa21.93■■□□□ 1.1
VPS52-214ENST00000463486 G3BP1Q13283 466 aaKnown RBP eCLIP21.93■■□□□ 1.1
VPS52-214ENST00000463486 CAVIN4Q5BKX8 364 aa21.93■■□□□ 1.1
VPS52-214ENST00000463486 RPAP2Q8IXW5 612 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms