RNA–Protein interactions for RNA: ENST00000463285.5

CTPS1-203, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 739 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-203ENST00000463285 CCDC146Q8IYE0 955 aa11.42□□□□□ -0.58
CTPS1-203ENST00000463285 AGBL3Q8NEM8 1001 aa11.42□□□□□ -0.58
CTPS1-203ENST00000463285 ZNF296Q8WUU4 475 aaPredicted RBP11.42□□□□□ -0.58
CTPS1-203ENST00000463285 CCDC85AQ96PX6 553 aaPredicted RBP11.42□□□□□ -0.58
CTPS1-203ENST00000463285 MYOZ2Q9NPC6 264 aa11.42□□□□□ -0.58
CTPS1-203ENST00000463285 PODXL2Q9NZ53 605 aa11.42□□□□□ -0.58
CTPS1-203ENST00000463285 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
CTPS1-203ENST00000463285 USP17L8P0C7I0 530 aa11.41□□□□□ -0.58
CTPS1-203ENST00000463285 MKRN3Q13064 507 aaKnown RBP11.41□□□□□ -0.58
CTPS1-203ENST00000463285 PKN2Q16513 984 aaKnown RBP11.41□□□□□ -0.58
CTPS1-203ENST00000463285 PRAMEF18Q5VWM3 479 aa11.41□□□□□ -0.58
CTPS1-203ENST00000463285 RIC3Q7Z5B4 369 aa11.41□□□□□ -0.58
CTPS1-203ENST00000463285 HYPKQ9NX55 129 aa11.41□□□□□ -0.58
CTPS1-203ENST00000463285 HOXB7P09629 217 aa11.4□□□□□ -0.58
CTPS1-203ENST00000463285 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
CTPS1-203ENST00000463285 CCDC152Q4G0S7 254 aa11.4□□□□□ -0.58
CTPS1-203ENST00000463285 ZBTB38Q8NAP3 1195 aaPredicted RBP11.4□□□□□ -0.58
CTPS1-203ENST00000463285 JARID2Q92833 1246 aaPredicted RBP11.4□□□□□ -0.58
CTPS1-203ENST00000463285 PITPNM2Q9BZ72 1349 aa11.39□□□□□ -0.59
CTPS1-203ENST00000463285 USP17L3A6NCW0 530 aa11.39□□□□□ -0.59
CTPS1-203ENST00000463285 USP17L4A6NCW7 530 aa11.39□□□□□ -0.59
CTPS1-203ENST00000463285 GPR25O00155 361 aa11.39□□□□□ -0.59
CTPS1-203ENST00000463285 ZNF609O15014 1411 aa11.39□□□□□ -0.59
CTPS1-203ENST00000463285 HSP90B1P14625 803 aaKnown RBP11.39□□□□□ -0.59
CTPS1-203ENST00000463285 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
CTPS1-203ENST00000463285 DUSP27Q5VZP5 1158 aa11.39□□□□□ -0.59
CTPS1-203ENST00000463285 USP17L1Q7RTZ2 530 aa11.39□□□□□ -0.59
CTPS1-203ENST00000463285 FBXW7Q969H0 707 aa11.39□□□□□ -0.59
CTPS1-203ENST00000463285 MYD88Q99836 296 aa11.39□□□□□ -0.59
CTPS1-203ENST00000463285 XDHP47989 1333 aa11.38□□□□□ -0.59
CTPS1-203ENST00000463285 NF2P35240 595 aa11.38□□□□□ -0.59
CTPS1-203ENST00000463285 NBPF9Q3BBW0 867 aa11.38□□□□□ -0.59
CTPS1-203ENST00000463285 LHX8Q68G74 356 aa11.38□□□□□ -0.59
CTPS1-203ENST00000463285 FBXO46Q6PJ61 603 aaPredicted RBP11.38□□□□□ -0.59
CTPS1-203ENST00000463285 ANKRD18AQ8IVF6 992 aa11.38□□□□□ -0.59
CTPS1-203ENST00000463285 GMLQ99445 158 aa11.38□□□□□ -0.59
CTPS1-203ENST00000463285 MXD3Q9BW11 206 aa11.38□□□□□ -0.59
CTPS1-203ENST00000463285 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
CTPS1-203ENST00000463285 PSME4Q14997 1843 aa11.37□□□□□ -0.59
CTPS1-203ENST00000463285 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-203ENST00000463285 PDE8AO60658 829 aa11.37□□□□□ -0.59
CTPS1-203ENST00000463285 ATP2B4P23634 1241 aa11.37□□□□□ -0.59
CTPS1-203ENST00000463285 TM4SF4P48230 202 aa11.37□□□□□ -0.59
CTPS1-203ENST00000463285 SREBF2Q12772 1141 aa11.37□□□□□ -0.59
CTPS1-203ENST00000463285 PRKG1Q13976 671 aa11.37□□□□□ -0.59
CTPS1-203ENST00000463285 PODNQ7Z5L7 613 aa11.37□□□□□ -0.59
CTPS1-203ENST00000463285 PHAXQ9H814 394 aaKnown RBP11.37□□□□□ -0.59
CTPS1-203ENST00000463285 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-203ENST00000463285 FKTNO75072 461 aa11.36□□□□□ -0.59
CTPS1-203ENST00000463285 SASH1O94885 1247 aa11.36□□□□□ -0.59
CTPS1-203ENST00000463285 PCCAP05165 728 aaPredicted RBP11.36□□□□□ -0.59
CTPS1-203ENST00000463285 OGFOD1Q8N543 542 aa11.36□□□□□ -0.59
CTPS1-203ENST00000463285 RUNDC1Q96C34 613 aa11.36□□□□□ -0.59
CTPS1-203ENST00000463285 CWC25Q9NXE8 425 aaPredicted RBP11.36□□□□□ -0.59
CTPS1-203ENST00000463285 WTIPA6NIX2 430 aaPredicted RBP11.35□□□□□ -0.59
CTPS1-203ENST00000463285 ELL2O00472 640 aaPredicted RBP11.35□□□□□ -0.59
CTPS1-203ENST00000463285 WNT10BO00744 389 aa11.35□□□□□ -0.59
CTPS1-203ENST00000463285 PTPN12Q05209 780 aaKnown RBP11.35□□□□□ -0.59
CTPS1-203ENST00000463285 WDR43Q15061 677 aaKnown RBP eCLIP11.35□□□□□ -0.59
CTPS1-203ENST00000463285 RALBP1Q15311 655 aa11.35□□□□□ -0.59
CTPS1-203ENST00000463285 DACT2Q5SW24 774 aa11.35□□□□□ -0.59
CTPS1-203ENST00000463285 ARMC9Q7Z3E5 817 aa11.35□□□□□ -0.59
CTPS1-203ENST00000463285 CCDC191Q8NCU4 936 aa11.35□□□□□ -0.59
CTPS1-203ENST00000463285 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
CTPS1-203ENST00000463285 CDC5LQ99459 802 aaKnown RBP11.35□□□□□ -0.59
CTPS1-203ENST00000463285 R3HDMLQ9H3Y0 253 aa11.35□□□□□ -0.59
CTPS1-203ENST00000463285 MBIPQ9NS73 344 aa11.35□□□□□ -0.59
CTPS1-203ENST00000463285 MED23Q9ULK4 1368 aa11.35□□□□□ -0.59
CTPS1-203ENST00000463285 NOM1Q5C9Z4 860 aaKnown RBP11.34□□□□□ -0.59
CTPS1-203ENST00000463285 GCC1Q96CN9 775 aa11.34□□□□□ -0.59
CTPS1-203ENST00000463285 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
CTPS1-203ENST00000463285 MYO3BQ8WXR4 1341 aa11.34□□□□□ -0.59
CTPS1-203ENST00000463285 CCT4P50991 539 aaKnown RBP11.33□□□□□ -0.6
CTPS1-203ENST00000463285 CTSWP56202 376 aa11.33□□□□□ -0.6
CTPS1-203ENST00000463285 DCBLD2Q96PD2 775 aa11.33□□□□□ -0.6
CTPS1-203ENST00000463285 ANGEL1Q9UNK9 670 aaKnown RBP11.33□□□□□ -0.6
CTPS1-203ENST00000463285 MINPP1Q9UNW1 487 aa11.33□□□□□ -0.6
CTPS1-203ENST00000463285 FZD1Q9UP38 647 aa11.33□□□□□ -0.6
CTPS1-203ENST00000463285 TRIM17Q9Y577 477 aa11.33□□□□□ -0.6
CTPS1-203ENST00000463285 DDX58O95786 925 aaKnown RBP11.32□□□□□ -0.6
CTPS1-203ENST00000463285 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
CTPS1-203ENST00000463285 STRIP1Q5VSL9 837 aa11.32□□□□□ -0.6
CTPS1-203ENST00000463285 SPRYD7Q5W111 196 aa11.32□□□□□ -0.6
CTPS1-203ENST00000463285 APOBEC3FQ8IUX4 373 aaKnown RBP11.32□□□□□ -0.6
CTPS1-203ENST00000463285 KIAA0825Q8IV33 1275 aa11.32□□□□□ -0.6
CTPS1-203ENST00000463285 METTL22Q9BUU2 404 aaPredicted RBP11.32□□□□□ -0.6
CTPS1-203ENST00000463285 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
CTPS1-203ENST00000463285 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
CTPS1-203ENST00000463285 GREM2Q9H772 168 aa11.32□□□□□ -0.6
CTPS1-203ENST00000463285 SPEF2Q9C093 1822 aa11.32□□□□□ -0.6
CTPS1-203ENST00000463285 DDX10Q13206 875 aaKnown RBP11.31□□□□□ -0.6
CTPS1-203ENST00000463285 TTLL11Q8NHH1 800 aa11.31□□□□□ -0.6
CTPS1-203ENST00000463285 BSDC1Q9NW68 430 aaPredicted RBP11.31□□□□□ -0.6
CTPS1-203ENST00000463285 MAP3K2Q9Y2U5 619 aa11.31□□□□□ -0.6
CTPS1-203ENST00000463285 MYBBP1AQ9BQG0 1328 aaKnown RBP11.31□□□□□ -0.6
CTPS1-203ENST00000463285 ZNF646O15015 1829 aaPredicted RBP11.3□□□□□ -0.6
CTPS1-203ENST00000463285 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
CTPS1-203ENST00000463285 MANSC4A6NHS7 340 aaPredicted RBP11.3□□□□□ -0.6
CTPS1-203ENST00000463285 IGHMBP2P38935 993 aaKnown RBP11.3□□□□□ -0.6
CTPS1-203ENST00000463285 GTF2IP78347 998 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms