RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SNW1Q13573 536 aaKnown RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 STK38Q15208 465 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 SF3A1Q15459 793 aaKnown RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC144BQ3MJ40 725 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 ESCO1Q5FWF5 840 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC129Q6ZRS4 1044 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 NYAP1Q6ZVC0 841 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 DDX46Q7L014 1031 aaKnown RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 BRAPQ7Z569 592 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 FILIP1Q7Z7B0 1213 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 ARHGEF25Q86VW2 580 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 CREBRFQ8IUR6 639 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC144CPQ8IYA2 1237 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 TTC5Q8N0Z6 440 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 CCAR2Q8N163 923 aaKnown RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 KRT222Q8N1A0 295 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 KBTBD3Q8NAB2 608 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 RAPGEF4Q8WZA2 1011 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF274Q96GC6 653 aaPredicted RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 BPIFA3Q9BQP9 254 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 SDF4Q9BRK5 362 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 OSBPL5Q9H0X9 879 aaPredicted RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 GOLPH3LQ9H4A5 285 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 SLC52A2Q9HAB3 445 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 GPR108Q9NPR9 543 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 RTEL1Q9NZ71 1219 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 CTNNA3Q9UI47 895 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 DBNLQ9UJU6 430 aaKnown RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 DDX41Q9UJV9 622 aaKnown RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 PALLDQ8WX93 1383 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 A0A087WZG4 1122 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC66A2RUB6 948 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 PRAMEF22A3QJZ6 481 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 PSDA5PKW4 1024 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 GOLGA8BA8MQT2 603 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 GOLIM4O00461 696 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 RNF113AO15541 343 aaKnown RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 MYO1BO43795 1136 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 CYP21A2P08686 494 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 SNRPA1P09661 255 aaKnown RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 SFPQP23246 707 aaKnown RBP eCLIP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 ADD1P35611 737 aaKnown RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 IL15P40933 162 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 RFX5P48382 616 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 FAM193AP78312 1265 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 CCZ1BP86790 482 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 CCZ1P86791 482 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 PTPN12Q05209 780 aaKnown RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 COL9A3Q14050 684 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 PDIA6Q15084 440 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 RABL6Q3YEC7 729 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 EPHA10Q5JZY3 1008 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 ZMYM1Q5SVZ6 1142 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF790Q6PG37 636 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 ANKRD13DQ6ZTN6 518 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 STOX1Q6ZVD7 989 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 COPS6Q7L5N1 327 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 UBE3BQ7Z3V4 1068 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 DHX40Q8IX18 779 aaKnown RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 FMR1NBQ8N0W7 255 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 JMYQ8N9B5 988 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 ENGASEQ8NFI3 743 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 KLHDC4Q8TBB5 520 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 EDC3Q96F86 508 aaKnown RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 C8orf76Q96K31 380 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 FMNL2Q96PY5 1086 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 USP28Q96RU2 1077 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 DBNDD2Q9BQY9 259 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 TRAIPQ9BWF2 469 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 LRRC2Q9BYS8 371 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 ARGLU1Q9NWB6 273 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 PAG1Q9NWQ8 432 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF215Q9UL58 517 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 USP16Q9Y5T5 823 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 MORC2Q9Y6X9 1032 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-204ENST00000462604 SALL1Q9NSC2 1324 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 PLEKHG2Q9H7P9 1386 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 SLIT3O75094 1523 aa4.09□□□□□ -1.75
COL8A1-204ENST00000462604 E7EWF7 191 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 CPLX1O14810 134 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 IKBKBO14920 756 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 SPTLC2O15270 562 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 PRC1O43663 620 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 MAST3O60307 1309 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 ZMYND10O75800 440 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 CDKL5O76039 1030 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 CTDNEP1O95476 244 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 ZFYP08048 801 aaPredicted RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 SLC3A2P08195 630 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 TPM1P09493 284 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 IFIT1P09914 478 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 PHKG2P15735 406 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 PDIA3P30101 505 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 NLRP12P59046 1061 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 CCT2P78371 535 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 EXOSC10Q01780 885 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 GUCY1B3Q02153 619 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 MKRN3Q13064 507 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 SLC39A6Q13433 755 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms