RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 FSTL1Q12841 308 aa19.8■□□□□ 0.76
ERCC3-206ENST00000462306 ITPRIPQ8IWB1 547 aa19.8■□□□□ 0.76
ERCC3-206ENST00000462306 VGLL2Q8N8G2 317 aa19.8■□□□□ 0.76
ERCC3-206ENST00000462306 SMC1BQ8NDV3 1235 aa19.8■□□□□ 0.76
ERCC3-206ENST00000462306 ZBTB12Q9Y330 459 aaPredicted RBP19.8■□□□□ 0.76
ERCC3-206ENST00000462306 EYA2O00167 538 aa19.79■□□□□ 0.76
ERCC3-206ENST00000462306 UBE4AQ14139 1066 aa19.79■□□□□ 0.76
ERCC3-206ENST00000462306 ATG9AQ7Z3C6 839 aa19.79■□□□□ 0.76
ERCC3-206ENST00000462306 PNMA8AQ86V59 439 aaPredicted RBP19.79■□□□□ 0.76
ERCC3-206ENST00000462306 DPF2Q92785 391 aa19.79■□□□□ 0.76
ERCC3-206ENST00000462306 ADAMTSL1Q8N6G6 1762 aa19.78■□□□□ 0.76
ERCC3-206ENST00000462306 METTL24Q5JXM2 366 aa19.78■□□□□ 0.76
ERCC3-206ENST00000462306 COPRSQ9NQ92 184 aa19.78■□□□□ 0.76
ERCC3-206ENST00000462306 FBXO3Q9UK99 471 aa19.78■□□□□ 0.76
ERCC3-206ENST00000462306 PSME4Q14997 1843 aa19.78■□□□□ 0.76
ERCC3-206ENST00000462306 SHTN1A0MZ66 631 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 USP17L3A6NCW0 530 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 USP17L4A6NCW7 530 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 SRGAP3O43295 1099 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 CIAO1O76071 339 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 PDE8BO95263 885 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 MS4A1P11836 297 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 RPS12P25398 132 aaKnown RBP19.77■□□□□ 0.76
ERCC3-206ENST00000462306 EAPPQ56P03 285 aaPredicted RBP19.77■□□□□ 0.76
ERCC3-206ENST00000462306 CHADLQ6NUI6 762 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 USP17L1Q7RTZ2 530 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 LDHDQ86WU2 507 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 CD209Q9NNX6 404 aa19.77■□□□□ 0.76
ERCC3-206ENST00000462306 CNOT7Q9UIV1 285 aaKnown RBP19.77■□□□□ 0.76
ERCC3-206ENST00000462306 PA2G4Q9UQ80 394 aaKnown RBP19.77■□□□□ 0.76
ERCC3-206ENST00000462306 ZNF609O15014 1411 aa19.76■□□□□ 0.75
ERCC3-206ENST00000462306 RSBN1LQ6PCB5 846 aaPredicted RBP19.76■□□□□ 0.75
ERCC3-206ENST00000462306 USP50Q70EL3 339 aaPredicted RBP19.76■□□□□ 0.75
ERCC3-206ENST00000462306 SIL1Q9H173 461 aa19.76■□□□□ 0.75
ERCC3-206ENST00000462306 ADARB2Q9NS39 739 aaKnown RBP19.76■□□□□ 0.75
ERCC3-206ENST00000462306 ZNF646O15015 1829 aaPredicted RBP19.75■□□□□ 0.75
ERCC3-206ENST00000462306 HSPA6P17066 643 aa19.75■□□□□ 0.75
ERCC3-206ENST00000462306 DACT2Q5SW24 774 aa19.75■□□□□ 0.75
ERCC3-206ENST00000462306 ZNF804AQ7Z570 1209 aa19.75■□□□□ 0.75
ERCC3-206ENST00000462306 MICALL2Q8IY33 904 aa19.75■□□□□ 0.75
ERCC3-206ENST00000462306 GMLQ99445 158 aa19.75■□□□□ 0.75
ERCC3-206ENST00000462306 PNMA6EA0A0J9YXQ4 647 aa19.74■□□□□ 0.75
ERCC3-206ENST00000462306 IL1R1P14778 569 aa19.74■□□□□ 0.75
ERCC3-206ENST00000462306 FGFR2P21802 821 aa19.74■□□□□ 0.75
ERCC3-206ENST00000462306 STRIP1Q5VSL9 837 aa19.74■□□□□ 0.75
ERCC3-206ENST00000462306 AGBL3Q8NEM8 1001 aa19.74■□□□□ 0.75
ERCC3-206ENST00000462306 FAM84BQ96KN1 310 aaPredicted RBP19.74■□□□□ 0.75
ERCC3-206ENST00000462306 C1orf115Q9H7X2 142 aa19.74■□□□□ 0.75
ERCC3-206ENST00000462306 H7C1D1 291 aa19.73■□□□□ 0.75
ERCC3-206ENST00000462306 IL15P40933 162 aaPredicted RBP19.73■□□□□ 0.75
ERCC3-206ENST00000462306 GYG1P46976 350 aa19.73■□□□□ 0.75
ERCC3-206ENST00000462306 HIRAP54198 1017 aaPredicted RBP19.73■□□□□ 0.75
ERCC3-206ENST00000462306 MVPQ14764 893 aaKnown RBP19.73■□□□□ 0.75
ERCC3-206ENST00000462306 CLEC11AQ9Y240 323 aa19.73■□□□□ 0.75
ERCC3-206ENST00000462306 GTF2IP78347 998 aa19.72■□□□□ 0.75
ERCC3-206ENST00000462306 ATP8B2P98198 1209 aa19.72■□□□□ 0.75
ERCC3-206ENST00000462306 PUM3Q15397 648 aaKnown RBP19.72■□□□□ 0.75
ERCC3-206ENST00000462306 C20orf194Q5TEA3 1177 aa19.72■□□□□ 0.75
ERCC3-206ENST00000462306 TTLL5Q6EMB2 1281 aa19.72■□□□□ 0.75
ERCC3-206ENST00000462306 TRPM4Q8TD43 1214 aa19.72■□□□□ 0.75
ERCC3-206ENST00000462306 MXD3Q9BW11 206 aa19.72■□□□□ 0.75
ERCC3-206ENST00000462306 COG6Q9Y2V7 657 aa19.72■□□□□ 0.75
ERCC3-206ENST00000462306 HIBADHP31937 336 aaKnown RBP19.71■□□□□ 0.75
ERCC3-206ENST00000462306 ZNF280AP59817 542 aaPredicted RBP19.71■□□□□ 0.75
ERCC3-206ENST00000462306 POLA2Q14181 598 aa19.71■□□□□ 0.75
ERCC3-206ENST00000462306 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
ERCC3-206ENST00000462306 SAMD7Q7Z3H4 446 aa19.71■□□□□ 0.75
ERCC3-206ENST00000462306 FBXO33Q7Z6M2 555 aa19.71■□□□□ 0.75
ERCC3-206ENST00000462306 TDRD7Q8NHU6 1098 aaKnown RBP19.71■□□□□ 0.75
ERCC3-206ENST00000462306 CEP126Q9P2H0 1117 aa19.71■□□□□ 0.75
ERCC3-206ENST00000462306 ITGBL1O95965 494 aaPredicted RBP19.7■□□□□ 0.74
ERCC3-206ENST00000462306 EGFRP00533 1210 aa19.7■□□□□ 0.74
ERCC3-206ENST00000462306 MAP1SQ66K74 1059 aaPredicted RBP19.7■□□□□ 0.74
ERCC3-206ENST00000462306 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.7■□□□□ 0.74
ERCC3-206ENST00000462306 SSH3Q8TE77 659 aa19.7■□□□□ 0.74
ERCC3-206ENST00000462306 FBXW7Q969H0 707 aa19.7■□□□□ 0.74
ERCC3-206ENST00000462306 PGAP2Q9UHJ9 254 aa19.7■□□□□ 0.74
ERCC3-206ENST00000462306 DDX19BQ9UMR2 479 aa19.7■□□□□ 0.74
ERCC3-206ENST00000462306 SASH1O94885 1247 aa19.69■□□□□ 0.74
ERCC3-206ENST00000462306 USP17L8P0C7I0 530 aa19.69■□□□□ 0.74
ERCC3-206ENST00000462306 TBC1D10BQ4KMP7 808 aaPredicted RBP19.69■□□□□ 0.74
ERCC3-206ENST00000462306 LPIN2Q92539 896 aa19.69■□□□□ 0.74
ERCC3-206ENST00000462306 MYO3BQ8WXR4 1341 aa19.69■□□□□ 0.74
ERCC3-206ENST00000462306 IFIT1P09914 478 aaKnown RBP19.68■□□□□ 0.74
ERCC3-206ENST00000462306 CNTROBQ8N137 903 aa19.68■□□□□ 0.74
ERCC3-206ENST00000462306 CERS5Q8N5B7 392 aa19.68■□□□□ 0.74
ERCC3-206ENST00000462306 ZC3H15Q8WU90 426 aaKnown RBP19.68■□□□□ 0.74
ERCC3-206ENST00000462306 ZBTB40Q9NUA8 1239 aa19.68■□□□□ 0.74
ERCC3-206ENST00000462306 PASKQ96RG2 1323 aa19.68■□□□□ 0.74
ERCC3-206ENST00000462306 SLC5A1P13866 664 aa19.67■□□□□ 0.74
ERCC3-206ENST00000462306 BCAMP50895 628 aa19.67■□□□□ 0.74
ERCC3-206ENST00000462306 ATP2B3Q16720 1220 aa19.67■□□□□ 0.74
ERCC3-206ENST00000462306 CAVIN4Q5BKX8 364 aa19.67■□□□□ 0.74
ERCC3-206ENST00000462306 RBM26Q5T8P6 1007 aaKnown RBP19.67■□□□□ 0.74
ERCC3-206ENST00000462306 CEP85Q6P2H3 762 aa19.67■□□□□ 0.74
ERCC3-206ENST00000462306 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.67■□□□□ 0.74
ERCC3-206ENST00000462306 FAM205AQ6ZU69 1335 aa19.67■□□□□ 0.74
ERCC3-206ENST00000462306 APLP1P51693 650 aa19.66■□□□□ 0.74
ERCC3-206ENST00000462306 FKBP1AP62942 108 aaKnown RBP19.66■□□□□ 0.74
ERCC3-206ENST00000462306 TFCP2Q12800 502 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms