RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ECE1P42892 770 aa23.99■■□□□ 1.43
VARS-220ENST00000461874 KRT26Q7Z3Y9 468 aa23.99■■□□□ 1.43
VARS-220ENST00000461874 DCPSQ96C86 337 aaKnown RBP23.99■■□□□ 1.43
VARS-220ENST00000461874 ZNF408Q9H9D4 720 aa23.99■■□□□ 1.43
VARS-220ENST00000461874 SPEF2Q9C093 1822 aa23.98■■□□□ 1.43
VARS-220ENST00000461874 FOXN1O15353 648 aa23.98■■□□□ 1.43
VARS-220ENST00000461874 USP17L8P0C7I0 530 aa23.98■■□□□ 1.43
VARS-220ENST00000461874 KLRK1P26718 216 aa23.98■■□□□ 1.43
VARS-220ENST00000461874 DLK2Q6UY11 383 aa23.98■■□□□ 1.43
VARS-220ENST00000461874 PAXIP1Q6ZW49 1069 aaPredicted RBP23.98■■□□□ 1.43
VARS-220ENST00000461874 SSH1Q8WYL5 1049 aa23.98■■□□□ 1.43
VARS-220ENST00000461874 CDCA7LQ96GN5 454 aa23.98■■□□□ 1.43
VARS-220ENST00000461874 KCNJ4P48050 445 aa23.97■■□□□ 1.43
VARS-220ENST00000461874 CCDC57Q2TAC2 916 aa23.97■■□□□ 1.43
VARS-220ENST00000461874 DACT2Q5SW24 774 aa23.97■■□□□ 1.43
VARS-220ENST00000461874 CYP4F22Q6NT55 531 aa23.97■■□□□ 1.43
VARS-220ENST00000461874 AIDAQ96BJ3 306 aa23.97■■□□□ 1.43
VARS-220ENST00000461874 PTPRCP08575 1304 aa23.96■■□□□ 1.43
VARS-220ENST00000461874 STRIP1Q5VSL9 837 aa23.96■■□□□ 1.43
VARS-220ENST00000461874 TRMT2AQ8IZ69 625 aaKnown RBP23.96■■□□□ 1.43
VARS-220ENST00000461874 HHIPL1Q96JK4 782 aa23.96■■□□□ 1.43
VARS-220ENST00000461874 UTYO14607 1347 aa23.95■■□□□ 1.42
VARS-220ENST00000461874 ASTN2O75129 1339 aaPredicted RBP23.95■■□□□ 1.42
VARS-220ENST00000461874 ADM5C9JUS6 153 aa23.95■■□□□ 1.42
VARS-220ENST00000461874 TAF5LO75529 589 aa23.95■■□□□ 1.42
VARS-220ENST00000461874 MAP2K1Q02750 393 aaPredicted RBP23.95■■□□□ 1.42
VARS-220ENST00000461874 SCARF1Q14162 830 aa23.95■■□□□ 1.42
VARS-220ENST00000461874 HELBQ8NG08 1087 aaPredicted RBP23.95■■□□□ 1.42
VARS-220ENST00000461874 KAZALD1Q96I82 304 aa23.95■■□□□ 1.42
VARS-220ENST00000461874 ZNF594Q96JF6 807 aaPredicted RBP23.95■■□□□ 1.42
VARS-220ENST00000461874 MXD3Q9BW11 206 aa23.95■■□□□ 1.42
VARS-220ENST00000461874 MYOZ2Q9NPC6 264 aa23.95■■□□□ 1.42
VARS-220ENST00000461874 GGA3Q9NZ52 723 aa23.95■■□□□ 1.42
VARS-220ENST00000461874 PSME4Q14997 1843 aa23.94■■□□□ 1.42
VARS-220ENST00000461874 SNAP23O00161 211 aa23.94■■□□□ 1.42
VARS-220ENST00000461874 NBPF7P0C2Y1 421 aaPredicted RBP23.94■■□□□ 1.42
VARS-220ENST00000461874 GRM1Q13255 1194 aa23.94■■□□□ 1.42
VARS-220ENST00000461874 FBXW7Q969H0 707 aa23.94■■□□□ 1.42
VARS-220ENST00000461874 SUCLG2Q96I99 432 aa23.94■■□□□ 1.42
VARS-220ENST00000461874 MYO3BQ8WXR4 1341 aa23.93■■□□□ 1.42
VARS-220ENST00000461874 IRS2Q9Y4H2 1338 aa23.93■■□□□ 1.42
VARS-220ENST00000461874 CTCFP49711 727 aaPredicted RBP23.93■■□□□ 1.42
VARS-220ENST00000461874 ALDH1L2Q3SY69 923 aa23.93■■□□□ 1.42
VARS-220ENST00000461874 TAF7LQ5H9L4 462 aa23.93■■□□□ 1.42
VARS-220ENST00000461874 TTLL5Q6EMB2 1281 aa23.93■■□□□ 1.42
VARS-220ENST00000461874 LDHAL6AQ6ZMR3 332 aa23.93■■□□□ 1.42
VARS-220ENST00000461874 C15orf52Q6ZUT6 534 aaKnown RBP23.93■■□□□ 1.42
VARS-220ENST00000461874 SULF1Q8IWU6 871 aa23.93■■□□□ 1.42
VARS-220ENST00000461874 TNS4Q8IZW8 715 aa23.92■■□□□ 1.42
VARS-220ENST00000461874 CD209Q9NNX6 404 aa23.92■■□□□ 1.42
VARS-220ENST00000461874 MAP2K2P36507 400 aa23.91■■□□□ 1.42
VARS-220ENST00000461874 ANGEL2Q5VTE6 544 aaKnown RBP23.91■■□□□ 1.42
VARS-220ENST00000461874 OGFOD1Q8N543 542 aa23.91■■□□□ 1.42
VARS-220ENST00000461874 CNNM1Q9NRU3 951 aa23.91■■□□□ 1.42
VARS-220ENST00000461874 MMP14P50281 582 aa23.9■■□□□ 1.42
VARS-220ENST00000461874 HUNKP57058 714 aa23.9■■□□□ 1.42
VARS-220ENST00000461874 GTF2IP78347 998 aa23.9■■□□□ 1.42
VARS-220ENST00000461874 GBA2Q9HCG7 927 aaPredicted RBP23.9■■□□□ 1.42
VARS-220ENST00000461874 PRDM10Q9NQV6 1147 aa23.9■■□□□ 1.42
VARS-220ENST00000461874 POLR2AP24928 1970 aaKnown RBP23.9■■□□□ 1.42
VARS-220ENST00000461874 AOC2O75106 756 aa23.89■■□□□ 1.41
VARS-220ENST00000461874 PITPNM2Q9BZ72 1349 aa23.88■■□□□ 1.41
VARS-220ENST00000461874 PLIN1O60240 522 aa23.88■■□□□ 1.41
VARS-220ENST00000461874 CT47B1P0C2W7 299 aaPredicted RBP23.88■■□□□ 1.41
VARS-220ENST00000461874 NBPF9Q3BBW0 867 aa23.88■■□□□ 1.41
VARS-220ENST00000461874 RABL6Q3YEC7 729 aaPredicted RBP23.88■■□□□ 1.41
VARS-220ENST00000461874 C2orf69Q8N8R5 385 aa23.88■■□□□ 1.41
VARS-220ENST00000461874 CDCA5Q96FF9 252 aa23.88■■□□□ 1.41
VARS-220ENST00000461874 BICC1Q9H694 974 aaKnown RBP23.88■■□□□ 1.41
VARS-220ENST00000461874 SMC4Q9NTJ3 1288 aa23.88■■□□□ 1.41
VARS-220ENST00000461874 ZNF804AQ7Z570 1209 aa23.87■■□□□ 1.41
VARS-220ENST00000461874 USP44Q9H0E7 712 aa23.87■■□□□ 1.41
VARS-220ENST00000461874 THSD7BQ9C0I4 1608 aa23.87■■□□□ 1.41
VARS-220ENST00000461874 HSPA8P11142 646 aaKnown RBP23.86■■□□□ 1.41
VARS-220ENST00000461874 IL1R1P14778 569 aa23.86■■□□□ 1.41
VARS-220ENST00000461874 LBX1P52954 281 aa23.86■■□□□ 1.41
VARS-220ENST00000461874 KIAA0825Q8IV33 1275 aa23.86■■□□□ 1.41
VARS-220ENST00000461874 ANKRD44Q8N8A2 993 aa23.86■■□□□ 1.41
VARS-220ENST00000461874 PUS3Q9BZE2 481 aaKnown RBP23.86■■□□□ 1.41
VARS-220ENST00000461874 WNT10BO00744 389 aa23.85■■□□□ 1.41
VARS-220ENST00000461874 BEGAINQ9BUH8 593 aa23.85■■□□□ 1.41
VARS-220ENST00000461874 RIPOR2Q9Y4F9 1068 aa23.85■■□□□ 1.41
VARS-220ENST00000461874 ZNF646O15015 1829 aaPredicted RBP23.84■■□□□ 1.41
VARS-220ENST00000461874 UBE4AQ14139 1066 aa23.84■■□□□ 1.41
VARS-220ENST00000461874 RGMBQ6NW40 437 aa23.84■■□□□ 1.41
VARS-220ENST00000461874 HDAC9Q9UKV0 1011 aa23.84■■□□□ 1.41
VARS-220ENST00000461874 NOGQ13253 232 aa23.83■■□□□ 1.41
VARS-220ENST00000461874 CERS5Q8N5B7 392 aa23.83■■□□□ 1.41
VARS-220ENST00000461874 SCAF8Q9UPN6 1271 aaKnown RBP23.83■■□□□ 1.41
VARS-220ENST00000461874 SASH1O94885 1247 aa23.82■■□□□ 1.4
VARS-220ENST00000461874 BRPF1P55201 1214 aaPredicted RBP23.82■■□□□ 1.4
VARS-220ENST00000461874 ZBED3Q96IU2 234 aaPredicted RBP23.82■■□□□ 1.4
VARS-220ENST00000461874 MROH5Q6ZUA9 1318 aa23.82■■□□□ 1.4
VARS-220ENST00000461874 A0A1B0GUL6 1792 aa23.81■■□□□ 1.4
VARS-220ENST00000461874 FAM155AB1AL88 458 aaPredicted RBP23.81■■□□□ 1.4
VARS-220ENST00000461874 FKBP1AP62942 108 aaKnown RBP23.81■■□□□ 1.4
VARS-220ENST00000461874 ZIC5Q96T25 663 aa23.81■■□□□ 1.4
VARS-220ENST00000461874 NOB1Q9ULX3 412 aaKnown RBP23.81■■□□□ 1.4
VARS-220ENST00000461874 FKBP1BP68106 108 aa23.8■■□□□ 1.4
VARS-220ENST00000461874 LRRC24Q50LG9 513 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms