RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 CCDC85AQ96PX6 553 aaPredicted RBP18.65■□□□□ 0.58
TMEM39A-203ENST00000461654 ITGA6P23229 1130 aa18.64■□□□□ 0.57
TMEM39A-203ENST00000461654 SCNN1DP51172 638 aa18.64■□□□□ 0.57
TMEM39A-203ENST00000461654 HTRA3P83110 453 aa18.64■□□□□ 0.57
TMEM39A-203ENST00000461654 CXCL9Q07325 125 aa18.64■□□□□ 0.57
TMEM39A-203ENST00000461654 KLRG1Q96E93 195 aa18.64■□□□□ 0.57
TMEM39A-203ENST00000461654 GREM2Q9H772 168 aa18.64■□□□□ 0.57
TMEM39A-203ENST00000461654 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
TMEM39A-203ENST00000461654 GJA3Q9Y6H8 435 aa18.64■□□□□ 0.57
TMEM39A-203ENST00000461654 EYA2O00167 538 aa18.63■□□□□ 0.57
TMEM39A-203ENST00000461654 CIAO1O76071 339 aa18.63■□□□□ 0.57
TMEM39A-203ENST00000461654 IL15P40933 162 aaPredicted RBP18.63■□□□□ 0.57
TMEM39A-203ENST00000461654 IL1RAPL2Q9NP60 686 aa18.63■□□□□ 0.57
TMEM39A-203ENST00000461654 SEC31BQ9NQW1 1179 aa18.63■□□□□ 0.57
TMEM39A-203ENST00000461654 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
TMEM39A-203ENST00000461654 DUOX1Q9NRD9 1551 aa18.63■□□□□ 0.57
TMEM39A-203ENST00000461654 TAF1P21675 1872 aa18.63■□□□□ 0.57
TMEM39A-203ENST00000461654 ITGBL1O95965 494 aaPredicted RBP18.62■□□□□ 0.57
TMEM39A-203ENST00000461654 LMOD1P29536 600 aaPredicted RBP18.62■□□□□ 0.57
TMEM39A-203ENST00000461654 GPSM2P81274 684 aa18.62■□□□□ 0.57
TMEM39A-203ENST00000461654 WASHC4Q2M389 1173 aa18.62■□□□□ 0.57
TMEM39A-203ENST00000461654 JMYQ8N9B5 988 aa18.62■□□□□ 0.57
TMEM39A-203ENST00000461654 PASKQ96RG2 1323 aa18.62■□□□□ 0.57
TMEM39A-203ENST00000461654 RTL9Q8NET4 1388 aa18.62■□□□□ 0.57
TMEM39A-203ENST00000461654 ADAMTSL1Q8N6G6 1762 aa18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 COL4A1P02462 1669 aa18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 IFIT2P09913 472 aaKnown RBP18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 TNIP1Q15025 636 aa18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 EAPPQ56P03 285 aaPredicted RBP18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 GPATCH3Q96I76 525 aa18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 ZNF594Q96JF6 807 aaPredicted RBP18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 CDC5LQ99459 802 aaKnown RBP18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 CNNM1Q9NRU3 951 aa18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 POLLQ9UGP5 575 aa18.61■□□□□ 0.57
TMEM39A-203ENST00000461654 SASH1O94885 1247 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 IGHMBP2P38935 993 aaKnown RBP18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 EPS15P42566 896 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 CIAPIN1Q6FI81 312 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 LDHAL6AQ6ZMR3 332 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 USP50Q70EL3 339 aaPredicted RBP18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 TBC1D16Q8TBP0 767 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 EYA3Q99504 573 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 MPHOSPH8Q99549 860 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 CREBZFQ9NS37 354 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 GPRC5DQ9NZD1 345 aa18.6■□□□□ 0.57
TMEM39A-203ENST00000461654 MX1P20591 662 aa18.59■□□□□ 0.57
TMEM39A-203ENST00000461654 ANKRD18AQ8IVF6 992 aa18.59■□□□□ 0.57
TMEM39A-203ENST00000461654 CEP126Q9P2H0 1117 aa18.59■□□□□ 0.57
TMEM39A-203ENST00000461654 CLEC11AQ9Y240 323 aa18.59■□□□□ 0.57
TMEM39A-203ENST00000461654 LTBP1Q14766 1721 aa18.58■□□□□ 0.57
TMEM39A-203ENST00000461654 YDJCA8MPS7 323 aa18.58■□□□□ 0.56
TMEM39A-203ENST00000461654 C6orf229H3BNL8 230 aa18.58■□□□□ 0.56
TMEM39A-203ENST00000461654 TFCP2Q12800 502 aa18.58■□□□□ 0.56
TMEM39A-203ENST00000461654 AACSQ86V21 672 aa18.58■□□□□ 0.56
TMEM39A-203ENST00000461654 CNTROBQ8N137 903 aa18.58■□□□□ 0.56
TMEM39A-203ENST00000461654 ADARB2Q9NS39 739 aaKnown RBP18.58■□□□□ 0.56
TMEM39A-203ENST00000461654 MYH3P11055 1940 aa18.57■□□□□ 0.56
TMEM39A-203ENST00000461654 LRRC24Q50LG9 513 aa18.57■□□□□ 0.56
TMEM39A-203ENST00000461654 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
TMEM39A-203ENST00000461654 ZC3H12CQ9C0D7 883 aaKnown RBP18.57■□□□□ 0.56
TMEM39A-203ENST00000461654 GPR108Q9NPR9 543 aa18.57■□□□□ 0.56
TMEM39A-203ENST00000461654 AKAP2Q9Y2D5 859 aa18.57■□□□□ 0.56
TMEM39A-203ENST00000461654 AOX1Q06278 1338 aa18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 RAD17O75943 681 aa18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 GMPSP49915 693 aaPredicted RBP18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 PDE1AP54750 535 aa18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 TNNI3KQ59H18 835 aa18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 BMP2KLQ5H9B9 411 aa18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 METTL24Q5JXM2 366 aa18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 OTUD7AQ8TE49 926 aaPredicted RBP18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 PUS3Q9BZE2 481 aaKnown RBP18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 OSBPL3Q9H4L5 887 aa18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 BSDC1Q9NW68 430 aaPredicted RBP18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 STAP2Q9UGK3 403 aa18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 FPGT-TNNI3KV9GXZ4 949 aa18.56■□□□□ 0.56
TMEM39A-203ENST00000461654 MROH5Q6ZUA9 1318 aa18.55■□□□□ 0.56
TMEM39A-203ENST00000461654 RIMBP2O15034 1052 aa18.55■□□□□ 0.56
TMEM39A-203ENST00000461654 ERC2O15083 957 aa18.55■□□□□ 0.56
TMEM39A-203ENST00000461654 MAP1SQ66K74 1059 aaPredicted RBP18.55■□□□□ 0.56
TMEM39A-203ENST00000461654 DPF2Q92785 391 aa18.55■□□□□ 0.56
TMEM39A-203ENST00000461654 ANKIB1Q9P2G1 1089 aa18.55■□□□□ 0.56
TMEM39A-203ENST00000461654 GGA1Q9UJY5 639 aa18.55■□□□□ 0.56
TMEM39A-203ENST00000461654 XDHP47989 1333 aa18.54■□□□□ 0.56
TMEM39A-203ENST00000461654 TTC41PQ6P2S7 1318 aa18.54■□□□□ 0.56
TMEM39A-203ENST00000461654 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
TMEM39A-203ENST00000461654 EAF2Q96CJ1 260 aaPredicted RBP18.54■□□□□ 0.56
TMEM39A-203ENST00000461654 DBNDD1Q9H9R9 158 aa18.54■□□□□ 0.56
TMEM39A-203ENST00000461654 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
TMEM39A-203ENST00000461654 PGAP2Q9UHJ9 254 aa18.54■□□□□ 0.56
TMEM39A-203ENST00000461654 RIPOR2Q9Y4F9 1068 aa18.54■□□□□ 0.56
TMEM39A-203ENST00000461654 SALL3Q9BXA9 1300 aa18.53■□□□□ 0.56
TMEM39A-203ENST00000461654 TMEM88BA6NKF7 163 aa18.53■□□□□ 0.56
TMEM39A-203ENST00000461654 ECE2O60344 883 aa18.53■□□□□ 0.56
TMEM39A-203ENST00000461654 UFL1O94874 794 aa18.53■□□□□ 0.56
TMEM39A-203ENST00000461654 ATP2B4P23634 1241 aa18.53■□□□□ 0.56
TMEM39A-203ENST00000461654 ZC3H15Q8WU90 426 aaKnown RBP18.53■□□□□ 0.56
TMEM39A-203ENST00000461654 NEUROD6Q96NK8 337 aa18.53■□□□□ 0.56
TMEM39A-203ENST00000461654 MINPP1Q9UNW1 487 aa18.53■□□□□ 0.56
TMEM39A-203ENST00000461654 RPS12P25398 132 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms