RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 VGLL2Q8N8G2 317 aa24.99■■□□□ 1.59
SNAPC3-204ENST00000461041 RBM46Q8TBY0 533 aaKnown RBP24.99■■□□□ 1.59
SNAPC3-204ENST00000461041 SIL1Q9H173 461 aa24.99■■□□□ 1.59
SNAPC3-204ENST00000461041 COPRSQ9NQ92 184 aa24.99■■□□□ 1.59
SNAPC3-204ENST00000461041 FBXO3Q9UK99 471 aa24.99■■□□□ 1.59
SNAPC3-204ENST00000461041 PA2G4Q9UQ80 394 aaKnown RBP24.99■■□□□ 1.59
SNAPC3-204ENST00000461041 EPHX2P34913 555 aa24.98■■□□□ 1.59
SNAPC3-204ENST00000461041 MVPQ14764 893 aaKnown RBP24.98■■□□□ 1.59
SNAPC3-204ENST00000461041 ATG9AQ7Z3C6 839 aa24.98■■□□□ 1.59
SNAPC3-204ENST00000461041 C1orf115Q9H7X2 142 aa24.98■■□□□ 1.59
SNAPC3-204ENST00000461041 COG6Q9Y2V7 657 aa24.98■■□□□ 1.59
SNAPC3-204ENST00000461041 CIAO1O76071 339 aa24.97■■□□□ 1.59
SNAPC3-204ENST00000461041 PDE8BO95263 885 aa24.97■■□□□ 1.59
SNAPC3-204ENST00000461041 EPS15P42566 896 aa24.97■■□□□ 1.59
SNAPC3-204ENST00000461041 GPRC5DQ9NZD1 345 aa24.97■■□□□ 1.59
SNAPC3-204ENST00000461041 ZBTB12Q9Y330 459 aaPredicted RBP24.97■■□□□ 1.59
SNAPC3-204ENST00000461041 PSME4Q14997 1843 aa24.96■■□□□ 1.59
SNAPC3-204ENST00000461041 PNMA6EA0A0J9YXQ4 647 aa24.96■■□□□ 1.59
SNAPC3-204ENST00000461041 PDE3AQ14432 1141 aa24.96■■□□□ 1.59
SNAPC3-204ENST00000461041 C20orf194Q5TEA3 1177 aa24.96■■□□□ 1.59
SNAPC3-204ENST00000461041 VIL1P09327 827 aaKnown RBP24.95■■□□□ 1.58
SNAPC3-204ENST00000461041 ZNF804AQ7Z570 1209 aa24.95■■□□□ 1.58
SNAPC3-204ENST00000461041 CD209Q9NNX6 404 aa24.95■■□□□ 1.58
SNAPC3-204ENST00000461041 DDX19BQ9UMR2 479 aa24.95■■□□□ 1.58
SNAPC3-204ENST00000461041 USP17L3A6NCW0 530 aa24.94■■□□□ 1.58
SNAPC3-204ENST00000461041 USP17L4A6NCW7 530 aa24.94■■□□□ 1.58
SNAPC3-204ENST00000461041 POTEIP0CG38 1075 aa24.94■■□□□ 1.58
SNAPC3-204ENST00000461041 POTEJP0CG39 1038 aa24.94■■□□□ 1.58
SNAPC3-204ENST00000461041 RPS12P25398 132 aaKnown RBP24.94■■□□□ 1.58
SNAPC3-204ENST00000461041 USP17L1Q7RTZ2 530 aa24.94■■□□□ 1.58
SNAPC3-204ENST00000461041 DPF2Q92785 391 aa24.94■■□□□ 1.58
SNAPC3-204ENST00000461041 IL15P40933 162 aaPredicted RBP24.93■■□□□ 1.58
SNAPC3-204ENST00000461041 ATP8B2P98198 1209 aa24.93■■□□□ 1.58
SNAPC3-204ENST00000461041 EAPPQ56P03 285 aaPredicted RBP24.93■■□□□ 1.58
SNAPC3-204ENST00000461041 PNMA8AQ86V59 439 aaPredicted RBP24.93■■□□□ 1.58
SNAPC3-204ENST00000461041 SMC1BQ8NDV3 1235 aa24.93■■□□□ 1.58
SNAPC3-204ENST00000461041 FSTL1Q12841 308 aa24.92■■□□□ 1.58
SNAPC3-204ENST00000461041 PUM3Q15397 648 aaKnown RBP24.92■■□□□ 1.58
SNAPC3-204ENST00000461041 RSBN1LQ6PCB5 846 aaPredicted RBP24.92■■□□□ 1.58
SNAPC3-204ENST00000461041 CEP126Q9P2H0 1117 aa24.92■■□□□ 1.58
SNAPC3-204ENST00000461041 CNOT7Q9UIV1 285 aaKnown RBP24.92■■□□□ 1.58
SNAPC3-204ENST00000461041 ZNF646O15015 1829 aaPredicted RBP24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 FGFR2P21802 821 aa24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 GYG1P46976 350 aa24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 POLA2Q14181 598 aa24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 LDHDQ86WU2 507 aa24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 MICALL2Q8IY33 904 aa24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 SSH3Q8TE77 659 aa24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 FBXW7Q969H0 707 aa24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 FAM84BQ96KN1 310 aaPredicted RBP24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 ADARB2Q9NS39 739 aaKnown RBP24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 ZNF609O15014 1411 aa24.91■■□□□ 1.58
SNAPC3-204ENST00000461041 ADAMTSL1Q8N6G6 1762 aa24.9■■□□□ 1.58
SNAPC3-204ENST00000461041 SHTN1A0MZ66 631 aa24.9■■□□□ 1.58
SNAPC3-204ENST00000461041 IL1R1P14778 569 aa24.9■■□□□ 1.58
SNAPC3-204ENST00000461041 DACT2Q5SW24 774 aa24.9■■□□□ 1.58
SNAPC3-204ENST00000461041 STRIP1Q5VSL9 837 aa24.9■■□□□ 1.58
SNAPC3-204ENST00000461041 USP50Q70EL3 339 aaPredicted RBP24.9■■□□□ 1.58
SNAPC3-204ENST00000461041 H7C1D1 291 aa24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 IFIT1P09914 478 aaKnown RBP24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 HIBADHP31937 336 aaKnown RBP24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 RRP1P56182 461 aaKnown RBP24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 GTF2IP78347 998 aa24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 TTLL5Q6EMB2 1281 aa24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 CHADLQ6NUI6 762 aa24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 CEP85Q6P2H3 762 aa24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 AGBL3Q8NEM8 1001 aa24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 GMLQ99445 158 aa24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 CHMP4BQ9H444 224 aaKnown RBP24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 ZBTB40Q9NUA8 1239 aa24.89■■□□□ 1.58
SNAPC3-204ENST00000461041 FBXO33Q7Z6M2 555 aa24.88■■□□□ 1.57
SNAPC3-204ENST00000461041 LPIN2Q92539 896 aa24.88■■□□□ 1.57
SNAPC3-204ENST00000461041 MXD3Q9BW11 206 aa24.88■■□□□ 1.57
SNAPC3-204ENST00000461041 CLEC11AQ9Y240 323 aa24.88■■□□□ 1.57
SNAPC3-204ENST00000461041 SLC5A1P13866 664 aa24.87■■□□□ 1.57
SNAPC3-204ENST00000461041 ATP2B3Q16720 1220 aa24.87■■□□□ 1.57
SNAPC3-204ENST00000461041 CAVIN4Q5BKX8 364 aa24.87■■□□□ 1.57
SNAPC3-204ENST00000461041 TDRD7Q8NHU6 1098 aaKnown RBP24.87■■□□□ 1.57
SNAPC3-204ENST00000461041 G3BP1Q13283 466 aaKnown RBP eCLIP24.86■■□□□ 1.57
SNAPC3-204ENST00000461041 VPS37DQ86XT2 251 aa24.86■■□□□ 1.57
SNAPC3-204ENST00000461041 MYO3BQ8WXR4 1341 aa24.86■■□□□ 1.57
SNAPC3-204ENST00000461041 TFCP2Q12800 502 aa24.85■■□□□ 1.57
SNAPC3-204ENST00000461041 TRPM4Q8TD43 1214 aa24.85■■□□□ 1.57
SNAPC3-204ENST00000461041 SASH1O94885 1247 aa24.84■■□□□ 1.57
SNAPC3-204ENST00000461041 BCAMP50895 628 aa24.84■■□□□ 1.57
SNAPC3-204ENST00000461041 HIRAP54198 1017 aaPredicted RBP24.84■■□□□ 1.57
SNAPC3-204ENST00000461041 SAMD7Q7Z3H4 446 aa24.84■■□□□ 1.57
SNAPC3-204ENST00000461041 USP17L8P0C7I0 530 aa24.83■■□□□ 1.57
SNAPC3-204ENST00000461041 ZNF280AP59817 542 aaPredicted RBP24.83■■□□□ 1.57
SNAPC3-204ENST00000461041 TBC1D10BQ4KMP7 808 aaPredicted RBP24.83■■□□□ 1.57
SNAPC3-204ENST00000461041 JAG2Q9Y219 1238 aa24.83■■□□□ 1.57
SNAPC3-204ENST00000461041 SURF6O75683 361 aaKnown RBP24.82■■□□□ 1.56
SNAPC3-204ENST00000461041 EGFRP00533 1210 aa24.82■■□□□ 1.56
SNAPC3-204ENST00000461041 HSPA6P17066 643 aa24.82■■□□□ 1.56
SNAPC3-204ENST00000461041 MAP1SQ66K74 1059 aaPredicted RBP24.82■■□□□ 1.56
SNAPC3-204ENST00000461041 RPAP2Q8IXW5 612 aaPredicted RBP24.82■■□□□ 1.56
SNAPC3-204ENST00000461041 IQSEC3Q9UPP2 1182 aaPredicted RBP24.82■■□□□ 1.56
SNAPC3-204ENST00000461041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.82■■□□□ 1.56
SNAPC3-204ENST00000461041 FAM205AQ6ZU69 1335 aa24.82■■□□□ 1.56
SNAPC3-204ENST00000461041 RBM26Q5T8P6 1007 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms