RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 PDE8BO95263 885 aa25.68■■□□□ 1.7
RPUSD3-210ENST00000460909 ATP8B2P98198 1209 aa25.68■■□□□ 1.7
RPUSD3-210ENST00000460909 PODNQ7Z5L7 613 aa25.68■■□□□ 1.7
RPUSD3-210ENST00000460909 ZBTB40Q9NUA8 1239 aa25.68■■□□□ 1.7
RPUSD3-210ENST00000460909 SCNN1DP51172 638 aa25.67■■□□□ 1.7
RPUSD3-210ENST00000460909 RRP1P56182 461 aaKnown RBP25.67■■□□□ 1.7
RPUSD3-210ENST00000460909 POLA2Q14181 598 aa25.67■■□□□ 1.7
RPUSD3-210ENST00000460909 TNIP1Q15025 636 aa25.67■■□□□ 1.7
RPUSD3-210ENST00000460909 SSH3Q8TE77 659 aa25.67■■□□□ 1.7
RPUSD3-210ENST00000460909 COA1Q9GZY4 146 aa25.67■■□□□ 1.7
RPUSD3-210ENST00000460909 ZNF646O15015 1829 aaPredicted RBP25.67■■□□□ 1.7
RPUSD3-210ENST00000460909 G3V3G9 751 aa25.66■■□□□ 1.7
RPUSD3-210ENST00000460909 PSMD14O00487 310 aa25.66■■□□□ 1.7
RPUSD3-210ENST00000460909 DCAF8Q5TAQ9 597 aa25.66■■□□□ 1.7
RPUSD3-210ENST00000460909 IL15P40933 162 aaPredicted RBP25.65■■□□□ 1.7
RPUSD3-210ENST00000460909 IQCA1LA6NCM1 817 aa25.64■■□□□ 1.7
RPUSD3-210ENST00000460909 VIL1P09327 827 aaKnown RBP25.64■■□□□ 1.7
RPUSD3-210ENST00000460909 FGFR2P21802 821 aa25.64■■□□□ 1.7
RPUSD3-210ENST00000460909 GMPSP49915 693 aaPredicted RBP25.64■■□□□ 1.7
RPUSD3-210ENST00000460909 CEP85Q6P2H3 762 aa25.64■■□□□ 1.7
RPUSD3-210ENST00000460909 TAF1DQ9H5J8 278 aaPredicted RBP25.64■■□□□ 1.7
RPUSD3-210ENST00000460909 HACL1Q9UJ83 578 aa25.64■■□□□ 1.7
RPUSD3-210ENST00000460909 TOMM70O94826 608 aa25.63■■□□□ 1.69
RPUSD3-210ENST00000460909 CD209Q9NNX6 404 aa25.63■■□□□ 1.69
RPUSD3-210ENST00000460909 EPS15P42566 896 aa25.62■■□□□ 1.69
RPUSD3-210ENST00000460909 FAM84BQ96KN1 310 aaPredicted RBP25.62■■□□□ 1.69
RPUSD3-210ENST00000460909 GPRC5DQ9NZD1 345 aa25.62■■□□□ 1.69
RPUSD3-210ENST00000460909 ZBTB12Q9Y330 459 aaPredicted RBP25.62■■□□□ 1.69
RPUSD3-210ENST00000460909 IL1R1P14778 569 aa25.61■■□□□ 1.69
RPUSD3-210ENST00000460909 PUM3Q15397 648 aaKnown RBP25.61■■□□□ 1.69
RPUSD3-210ENST00000460909 CHMP4BQ9H444 224 aaKnown RBP25.61■■□□□ 1.69
RPUSD3-210ENST00000460909 CEP126Q9P2H0 1117 aa25.61■■□□□ 1.69
RPUSD3-210ENST00000460909 ZNF609O15014 1411 aa25.61■■□□□ 1.69
RPUSD3-210ENST00000460909 USP17L3A6NCW0 530 aa25.6■■□□□ 1.69
RPUSD3-210ENST00000460909 USP17L4A6NCW7 530 aa25.6■■□□□ 1.69
RPUSD3-210ENST00000460909 EPHX2P34913 555 aa25.6■■□□□ 1.69
RPUSD3-210ENST00000460909 USP17L1Q7RTZ2 530 aa25.6■■□□□ 1.69
RPUSD3-210ENST00000460909 ZNF804AQ7Z570 1209 aa25.6■■□□□ 1.69
RPUSD3-210ENST00000460909 FBXO33Q7Z6M2 555 aa25.6■■□□□ 1.69
RPUSD3-210ENST00000460909 DPF2Q92785 391 aa25.6■■□□□ 1.69
RPUSD3-210ENST00000460909 RPS12P25398 132 aaKnown RBP25.59■■□□□ 1.69
RPUSD3-210ENST00000460909 GYG1P46976 350 aa25.59■■□□□ 1.69
RPUSD3-210ENST00000460909 DACT2Q5SW24 774 aa25.59■■□□□ 1.69
RPUSD3-210ENST00000460909 RBM46Q8TBY0 533 aaKnown RBP25.59■■□□□ 1.69
RPUSD3-210ENST00000460909 GMLQ99445 158 aa25.59■■□□□ 1.69
RPUSD3-210ENST00000460909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.59■■□□□ 1.69
RPUSD3-210ENST00000460909 ADAMTSL1Q8N6G6 1762 aa25.59■■□□□ 1.69
RPUSD3-210ENST00000460909 POTEIP0CG38 1075 aa25.58■■□□□ 1.69
RPUSD3-210ENST00000460909 POTEJP0CG39 1038 aa25.58■■□□□ 1.69
RPUSD3-210ENST00000460909 LMOD1P29536 600 aaPredicted RBP25.58■■□□□ 1.69
RPUSD3-210ENST00000460909 HIBADHP31937 336 aaKnown RBP25.58■■□□□ 1.69
RPUSD3-210ENST00000460909 STRIP1Q5VSL9 837 aa25.58■■□□□ 1.69
RPUSD3-210ENST00000460909 RSBN1LQ6PCB5 846 aaPredicted RBP25.58■■□□□ 1.69
RPUSD3-210ENST00000460909 C16orf71Q8IYS4 520 aaPredicted RBP25.58■■□□□ 1.69
RPUSD3-210ENST00000460909 LPIN2Q92539 896 aa25.58■■□□□ 1.69
RPUSD3-210ENST00000460909 SHTN1A0MZ66 631 aa25.57■■□□□ 1.68
RPUSD3-210ENST00000460909 C1QTNF8P60827 252 aa25.57■■□□□ 1.68
RPUSD3-210ENST00000460909 SIRT2Q8IXJ6 389 aa25.57■■□□□ 1.68
RPUSD3-210ENST00000460909 RPAP2Q8IXW5 612 aaPredicted RBP25.57■■□□□ 1.68
RPUSD3-210ENST00000460909 TDRD7Q8NHU6 1098 aaKnown RBP25.57■■□□□ 1.68
RPUSD3-210ENST00000460909 NOP58Q9Y2X3 529 aaKnown RBP25.57■■□□□ 1.68
RPUSD3-210ENST00000460909 SASH1O94885 1247 aa25.56■■□□□ 1.68
RPUSD3-210ENST00000460909 IFIT1P09914 478 aaKnown RBP25.56■■□□□ 1.68
RPUSD3-210ENST00000460909 TFCP2Q12800 502 aa25.56■■□□□ 1.68
RPUSD3-210ENST00000460909 ATP2B3Q16720 1220 aa25.56■■□□□ 1.68
RPUSD3-210ENST00000460909 TTLL5Q6EMB2 1281 aa25.56■■□□□ 1.68
RPUSD3-210ENST00000460909 CNOT7Q9UIV1 285 aaKnown RBP25.56■■□□□ 1.68
RPUSD3-210ENST00000460909 SLC5A1P13866 664 aa25.55■■□□□ 1.68
RPUSD3-210ENST00000460909 GTF2IP78347 998 aa25.55■■□□□ 1.68
RPUSD3-210ENST00000460909 G3BP1Q13283 466 aaKnown RBP eCLIP25.55■■□□□ 1.68
RPUSD3-210ENST00000460909 PNMA8AQ86V59 439 aaPredicted RBP25.55■■□□□ 1.68
RPUSD3-210ENST00000460909 AGBL3Q8NEM8 1001 aa25.55■■□□□ 1.68
RPUSD3-210ENST00000460909 MXD3Q9BW11 206 aa25.55■■□□□ 1.68
RPUSD3-210ENST00000460909 ADARB2Q9NS39 739 aaKnown RBP25.55■■□□□ 1.68
RPUSD3-210ENST00000460909 ARAP2Q8WZ64 1704 aa25.54■■□□□ 1.68
RPUSD3-210ENST00000460909 SURF6O75683 361 aaKnown RBP25.54■■□□□ 1.68
RPUSD3-210ENST00000460909 BCAMP50895 628 aa25.54■■□□□ 1.68
RPUSD3-210ENST00000460909 MICALL2Q8IY33 904 aa25.54■■□□□ 1.68
RPUSD3-210ENST00000460909 CAVIN4Q5BKX8 364 aa25.53■■□□□ 1.68
RPUSD3-210ENST00000460909 USP50Q70EL3 339 aaPredicted RBP25.53■■□□□ 1.68
RPUSD3-210ENST00000460909 TIMM10P62072 90 aa25.52■■□□□ 1.68
RPUSD3-210ENST00000460909 EAPPQ56P03 285 aaPredicted RBP25.52■■□□□ 1.68
RPUSD3-210ENST00000460909 LDHDQ86WU2 507 aa25.52■■□□□ 1.68
RPUSD3-210ENST00000460909 FAM205AQ6ZU69 1335 aa25.52■■□□□ 1.68
RPUSD3-210ENST00000460909 H7C1D1 291 aa25.51■■□□□ 1.67
RPUSD3-210ENST00000460909 ZNF280AP59817 542 aaPredicted RBP25.51■■□□□ 1.67
RPUSD3-210ENST00000460909 FSTL1Q12841 308 aa25.51■■□□□ 1.67
RPUSD3-210ENST00000460909 CERS5Q8N5B7 392 aa25.51■■□□□ 1.67
RPUSD3-210ENST00000460909 FBXW7Q969H0 707 aa25.51■■□□□ 1.67
RPUSD3-210ENST00000460909 AKAP2Q9Y2D5 859 aa25.51■■□□□ 1.67
RPUSD3-210ENST00000460909 MYO3BQ8WXR4 1341 aa25.51■■□□□ 1.67
RPUSD3-210ENST00000460909 A0A1B0GUL7 405 aa25.5■■□□□ 1.67
RPUSD3-210ENST00000460909 EGFRP00533 1210 aa25.5■■□□□ 1.67
RPUSD3-210ENST00000460909 HIRAP54198 1017 aaPredicted RBP25.5■■□□□ 1.67
RPUSD3-210ENST00000460909 VPS37DQ86XT2 251 aa25.5■■□□□ 1.67
RPUSD3-210ENST00000460909 SMC1BQ8NDV3 1235 aa25.5■■□□□ 1.67
RPUSD3-210ENST00000460909 TRPM4Q8TD43 1214 aa25.5■■□□□ 1.67
RPUSD3-210ENST00000460909 CRBNQ96SW2 442 aa25.5■■□□□ 1.67
RPUSD3-210ENST00000460909 ADORA1P30542 326 aa25.49■■□□□ 1.67
RPUSD3-210ENST00000460909 FKBP1AP62942 108 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms