RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 COL13A1Q5TAT6 717 aaPredicted RBP20.81■□□□□ 0.92
NCKIPSD-208ENST00000454134 AGBL3Q8NEM8 1001 aa20.81■□□□□ 0.92
NCKIPSD-208ENST00000454134 FBXW7Q969H0 707 aa20.81■□□□□ 0.92
NCKIPSD-208ENST00000454134 SUCLG2Q96I99 432 aa20.81■□□□□ 0.92
NCKIPSD-208ENST00000454134 MXD3Q9BW11 206 aa20.81■□□□□ 0.92
NCKIPSD-208ENST00000454134 ASTN2O75129 1339 aaPredicted RBP20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 NBPF7P0C2Y1 421 aaPredicted RBP20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 CCDC57Q2TAC2 916 aa20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 TAF7LQ5H9L4 462 aa20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 IFFO2Q5TF58 517 aa20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 PAXIP1Q6ZW49 1069 aaPredicted RBP20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 TRMT2AQ8IZ69 625 aaKnown RBP20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 KAZALD1Q96I82 304 aa20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 GMLQ99445 158 aa20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 COA1Q9GZY4 146 aa20.8■□□□□ 0.92
NCKIPSD-208ENST00000454134 PTPRCP08575 1304 aa20.79■□□□□ 0.92
NCKIPSD-208ENST00000454134 WDR33Q9C0J8 1336 aaKnown RBP20.79■□□□□ 0.92
NCKIPSD-208ENST00000454134 ZNF280AP59817 542 aaPredicted RBP20.79■□□□□ 0.92
NCKIPSD-208ENST00000454134 GRM1Q13255 1194 aa20.79■□□□□ 0.92
NCKIPSD-208ENST00000454134 KRT26Q7Z3Y9 468 aa20.79■□□□□ 0.92
NCKIPSD-208ENST00000454134 TLL2Q9Y6L7 1015 aa20.79■□□□□ 0.92
NCKIPSD-208ENST00000454134 ZNF609O15014 1411 aa20.78■□□□□ 0.92
NCKIPSD-208ENST00000454134 ADM5C9JUS6 153 aa20.78■□□□□ 0.92
NCKIPSD-208ENST00000454134 USP17L8P0C7I0 530 aa20.78■□□□□ 0.92
NCKIPSD-208ENST00000454134 DACT2Q5SW24 774 aa20.78■□□□□ 0.92
NCKIPSD-208ENST00000454134 CYP4F22Q6NT55 531 aa20.78■□□□□ 0.92
NCKIPSD-208ENST00000454134 DCPSQ96C86 337 aaKnown RBP20.78■□□□□ 0.92
NCKIPSD-208ENST00000454134 CAPNS2Q96L46 248 aa20.78■□□□□ 0.92
NCKIPSD-208ENST00000454134 GGA3Q9NZ52 723 aa20.78■□□□□ 0.92
NCKIPSD-208ENST00000454134 POLR2AP24928 1970 aaKnown RBP20.77■□□□□ 0.92
NCKIPSD-208ENST00000454134 PLIN1O60240 522 aa20.77■□□□□ 0.92
NCKIPSD-208ENST00000454134 LDHAL6AQ6ZMR3 332 aa20.77■□□□□ 0.92
NCKIPSD-208ENST00000454134 SMC4Q9NTJ3 1288 aa20.77■□□□□ 0.92
NCKIPSD-208ENST00000454134 A0A1B0GUL6 1792 aa20.77■□□□□ 0.91
NCKIPSD-208ENST00000454134 UTYO14607 1347 aa20.77■□□□□ 0.91
NCKIPSD-208ENST00000454134 ZNF646O15015 1829 aaPredicted RBP20.76■□□□□ 0.91
NCKIPSD-208ENST00000454134 FOXN1O15353 648 aa20.76■□□□□ 0.91
NCKIPSD-208ENST00000454134 SCARF1Q14162 830 aa20.76■□□□□ 0.91
NCKIPSD-208ENST00000454134 ALDH1L2Q3SY69 923 aa20.76■□□□□ 0.91
NCKIPSD-208ENST00000454134 SAPCD2Q86UD0 394 aa20.76■□□□□ 0.91
NCKIPSD-208ENST00000454134 MYOZ2Q9NPC6 264 aa20.76■□□□□ 0.91
NCKIPSD-208ENST00000454134 CNNM1Q9NRU3 951 aa20.76■□□□□ 0.91
NCKIPSD-208ENST00000454134 STRIP1Q5VSL9 837 aa20.75■□□□□ 0.91
NCKIPSD-208ENST00000454134 BICC1Q9H694 974 aaKnown RBP20.75■□□□□ 0.91
NCKIPSD-208ENST00000454134 IRS2Q9Y4H2 1338 aa20.75■□□□□ 0.91
NCKIPSD-208ENST00000454134 ECE1P42892 770 aa20.74■□□□□ 0.91
NCKIPSD-208ENST00000454134 GTF2IP78347 998 aa20.74■□□□□ 0.91
NCKIPSD-208ENST00000454134 ANGEL2Q5VTE6 544 aaKnown RBP20.74■□□□□ 0.91
NCKIPSD-208ENST00000454134 TTLL5Q6EMB2 1281 aa20.74■□□□□ 0.91
NCKIPSD-208ENST00000454134 PUS3Q9BZE2 481 aaKnown RBP20.74■□□□□ 0.91
NCKIPSD-208ENST00000454134 CD209Q9NNX6 404 aa20.74■□□□□ 0.91
NCKIPSD-208ENST00000454134 SULF1Q8IWU6 871 aa20.73■□□□□ 0.91
NCKIPSD-208ENST00000454134 AIDAQ96BJ3 306 aa20.73■□□□□ 0.91
NCKIPSD-208ENST00000454134 WBP1LQ9NX94 342 aa20.73■□□□□ 0.91
NCKIPSD-208ENST00000454134 SCAF8Q9UPN6 1271 aaKnown RBP20.73■□□□□ 0.91
NCKIPSD-208ENST00000454134 AOC2O75106 756 aa20.72■□□□□ 0.91
NCKIPSD-208ENST00000454134 C15orf52Q6ZUT6 534 aaKnown RBP20.72■□□□□ 0.91
NCKIPSD-208ENST00000454134 MIER1Q8N108 512 aa20.72■□□□□ 0.91
NCKIPSD-208ENST00000454134 ANKRD44Q8N8A2 993 aa20.72■□□□□ 0.91
NCKIPSD-208ENST00000454134 USP44Q9H0E7 712 aa20.72■□□□□ 0.91
NCKIPSD-208ENST00000454134 NBPF9Q3BBW0 867 aa20.71■□□□□ 0.91
NCKIPSD-208ENST00000454134 RABL6Q3YEC7 729 aaPredicted RBP20.71■□□□□ 0.91
NCKIPSD-208ENST00000454134 KIAA0825Q8IV33 1275 aa20.71■□□□□ 0.91
NCKIPSD-208ENST00000454134 OGFOD1Q8N543 542 aa20.71■□□□□ 0.91
NCKIPSD-208ENST00000454134 NOB1Q9ULX3 412 aaKnown RBP20.71■□□□□ 0.91
NCKIPSD-208ENST00000454134 MYO3BQ8WXR4 1341 aa20.71■□□□□ 0.91
NCKIPSD-208ENST00000454134 CDCA5Q96FF9 252 aa20.7■□□□□ 0.9
NCKIPSD-208ENST00000454134 THSD7BQ9C0I4 1608 aa20.69■□□□□ 0.9
NCKIPSD-208ENST00000454134 CT47B1P0C2W7 299 aaPredicted RBP20.69■□□□□ 0.9
NCKIPSD-208ENST00000454134 HUNKP57058 714 aa20.69■□□□□ 0.9
NCKIPSD-208ENST00000454134 MAP2K1Q02750 393 aaPredicted RBP20.69■□□□□ 0.9
NCKIPSD-208ENST00000454134 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
NCKIPSD-208ENST00000454134 ZNF804AQ7Z570 1209 aa20.69■□□□□ 0.9
NCKIPSD-208ENST00000454134 HHIPL1Q96JK4 782 aa20.69■□□□□ 0.9
NCKIPSD-208ENST00000454134 GBA2Q9HCG7 927 aaPredicted RBP20.69■□□□□ 0.9
NCKIPSD-208ENST00000454134 JAG2Q9Y219 1238 aa20.69■□□□□ 0.9
NCKIPSD-208ENST00000454134 SASH1O94885 1247 aa20.68■□□□□ 0.9
NCKIPSD-208ENST00000454134 CTCFP49711 727 aaPredicted RBP20.68■□□□□ 0.9
NCKIPSD-208ENST00000454134 LRRC24Q50LG9 513 aa20.68■□□□□ 0.9
NCKIPSD-208ENST00000454134 TNS4Q8IZW8 715 aa20.68■□□□□ 0.9
NCKIPSD-208ENST00000454134 CERS5Q8N5B7 392 aa20.68■□□□□ 0.9
NCKIPSD-208ENST00000454134 C2orf69Q8N8R5 385 aa20.68■□□□□ 0.9
NCKIPSD-208ENST00000454134 KLHDC4Q8TBB5 520 aa20.68■□□□□ 0.9
NCKIPSD-208ENST00000454134 RIPOR2Q9Y4F9 1068 aa20.68■□□□□ 0.9
NCKIPSD-208ENST00000454134 WNT10BO00744 389 aa20.67■□□□□ 0.9
NCKIPSD-208ENST00000454134 IL1R1P14778 569 aa20.67■□□□□ 0.9
NCKIPSD-208ENST00000454134 GYG1P46976 350 aa20.66■□□□□ 0.9
NCKIPSD-208ENST00000454134 LBX1P52954 281 aa20.66■□□□□ 0.9
NCKIPSD-208ENST00000454134 RARSP54136 660 aaKnown RBP20.66■□□□□ 0.9
NCKIPSD-208ENST00000454134 UBE4AQ14139 1066 aa20.66■□□□□ 0.9
NCKIPSD-208ENST00000454134 PRAMEF18Q5VWM3 479 aa20.66■□□□□ 0.9
NCKIPSD-208ENST00000454134 HDAC9Q9UKV0 1011 aa20.66■□□□□ 0.9
NCKIPSD-208ENST00000454134 PITPNM2Q9BZ72 1349 aa20.66■□□□□ 0.9
NCKIPSD-208ENST00000454134 MROH5Q6ZUA9 1318 aa20.65■□□□□ 0.9
NCKIPSD-208ENST00000454134 F8W031 263 aaPredicted RBP20.65■□□□□ 0.9
NCKIPSD-208ENST00000454134 MAP2K2P36507 400 aa20.65■□□□□ 0.9
NCKIPSD-208ENST00000454134 HSPA8P11142 646 aaKnown RBP20.64■□□□□ 0.89
NCKIPSD-208ENST00000454134 BRPF1P55201 1214 aaPredicted RBP20.64■□□□□ 0.89
NCKIPSD-208ENST00000454134 METTL24Q5JXM2 366 aa20.64■□□□□ 0.89
NCKIPSD-208ENST00000454134 ZIC5Q96T25 663 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms