RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 SNAP23O00161 211 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 PSMD14O00487 310 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 EPHX2P34913 555 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 GMPSP49915 693 aaPredicted RBP11.01□□□□□ -0.65
COL8A1-203ENST00000452013 C1QTNF8P60827 252 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 PUM3Q15397 648 aaKnown RBP11.01□□□□□ -0.65
COL8A1-203ENST00000452013 STRIP1Q5VSL9 837 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 TTLL5Q6EMB2 1281 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 TXNRD3Q86VQ6 643 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 VPS37DQ86XT2 251 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 RBM46Q8TBY0 533 aaKnown RBP11.01□□□□□ -0.65
COL8A1-203ENST00000452013 SSH3Q8TE77 659 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 LPIN2Q92539 896 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 KCNQ5Q9NR82 932 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 ZBTB40Q9NUA8 1239 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 GPRC5DQ9NZD1 345 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 PA2G4Q9UQ80 394 aaKnown RBP11.01□□□□□ -0.65
COL8A1-203ENST00000452013 AKAP2Q9Y2D5 859 aa11.01□□□□□ -0.65
COL8A1-203ENST00000452013 PNMA6EA0A0J9YXQ4 647 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 SLC5A1P13866 664 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 IL1R1P14778 569 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 EPS15P42566 896 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 MMP14P50281 582 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 SCNN1DP51172 638 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 RRP1P56182 461 aaKnown RBP11□□□□□ -0.65
COL8A1-203ENST00000452013 FSTL1Q12841 308 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 POLA2Q14181 598 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 C20orf194Q5TEA3 1177 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 RSBN1LQ6PCB5 846 aaPredicted RBP11□□□□□ -0.65
COL8A1-203ENST00000452013 USP50Q70EL3 339 aaPredicted RBP11□□□□□ -0.65
COL8A1-203ENST00000452013 VGLL2Q8N8G2 317 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 SMC1BQ8NDV3 1235 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 AGBL3Q8NEM8 1001 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 FBXW7Q969H0 707 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 FAM84BQ96KN1 310 aaPredicted RBP11□□□□□ -0.65
COL8A1-203ENST00000452013 C1orf115Q9H7X2 142 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 ADARB2Q9NS39 739 aaKnown RBP11□□□□□ -0.65
COL8A1-203ENST00000452013 CNOT7Q9UIV1 285 aaKnown RBP11□□□□□ -0.65
COL8A1-203ENST00000452013 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
COL8A1-203ENST00000452013 LAMB2P55268 1798 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 FER1L6Q2WGJ9 1857 aa11□□□□□ -0.65
COL8A1-203ENST00000452013 COL4A1P02462 1669 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 HMMRO75330 724 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 FRAT2O75474 233 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-203ENST00000452013 SURF6O75683 361 aaKnown RBP10.99□□□□□ -0.65
COL8A1-203ENST00000452013 SASH1O94885 1247 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 FGFR2P21802 821 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 KLRK1P26718 216 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 GTF2IP78347 998 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 OS9Q13438 667 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-203ENST00000452013 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-203ENST00000452013 CEP85Q6P2H3 762 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 FBXO33Q7Z6M2 555 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 LDHDQ86WU2 507 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 MYO3BQ8WXR4 1341 aa10.99□□□□□ -0.65
COL8A1-203ENST00000452013 GYG1P46976 350 aa10.98□□□□□ -0.65
COL8A1-203ENST00000452013 ATP2B3Q16720 1220 aa10.98□□□□□ -0.65
COL8A1-203ENST00000452013 HSP90AB4PQ58FF6 505 aa10.98□□□□□ -0.65
COL8A1-203ENST00000452013 DACT2Q5SW24 774 aa10.98□□□□□ -0.65
COL8A1-203ENST00000452013 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
COL8A1-203ENST00000452013 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
COL8A1-203ENST00000452013 TDRD7Q8NHU6 1098 aaKnown RBP10.98□□□□□ -0.65
COL8A1-203ENST00000452013 GNL3LQ9NVN8 582 aaKnown RBP10.98□□□□□ -0.65
COL8A1-203ENST00000452013 IRS2Q9Y4H2 1338 aa10.98□□□□□ -0.65
COL8A1-203ENST00000452013 CHD4Q14839 1912 aa10.97□□□□□ -0.65
COL8A1-203ENST00000452013 GOLGB1Q14789 3259 aaKnown RBP10.97□□□□□ -0.65
COL8A1-203ENST00000452013 USP17L8P0C7I0 530 aa10.97□□□□□ -0.65
COL8A1-203ENST00000452013 BCAMP50895 628 aa10.97□□□□□ -0.65
COL8A1-203ENST00000452013 FKBP1AP62942 108 aaKnown RBP10.97□□□□□ -0.65
COL8A1-203ENST00000452013 TFCP2Q12800 502 aa10.97□□□□□ -0.65
COL8A1-203ENST00000452013 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
COL8A1-203ENST00000452013 ZC3H15Q8WU90 426 aaKnown RBP10.97□□□□□ -0.65
COL8A1-203ENST00000452013 HDAC9Q9UKV0 1011 aa10.97□□□□□ -0.65
COL8A1-203ENST00000452013 NOP58Q9Y2X3 529 aaKnown RBP10.97□□□□□ -0.65
COL8A1-203ENST00000452013 DUOX1Q9NRD9 1551 aa10.97□□□□□ -0.65
COL8A1-203ENST00000452013 COL4A5P29400 1685 aa10.97□□□□□ -0.65
COL8A1-203ENST00000452013 LRRC37AA6NMS7 1700 aa10.96□□□□□ -0.65
COL8A1-203ENST00000452013 FAM205AQ6ZU69 1335 aa10.96□□□□□ -0.65
COL8A1-203ENST00000452013 TIMM10P62072 90 aa10.96□□□□□ -0.65
COL8A1-203ENST00000452013 GORABQ5T7V8 394 aa10.96□□□□□ -0.65
COL8A1-203ENST00000452013 RBM26Q5T8P6 1007 aaKnown RBP10.96□□□□□ -0.65
COL8A1-203ENST00000452013 ERC1Q8IUD2 1116 aa10.96□□□□□ -0.65
COL8A1-203ENST00000452013 NEUROD6Q96NK8 337 aa10.96□□□□□ -0.65
COL8A1-203ENST00000452013 GMLQ99445 158 aa10.96□□□□□ -0.65
COL8A1-203ENST00000452013 GPR108Q9NPR9 543 aa10.96□□□□□ -0.65
COL8A1-203ENST00000452013 UTRNP46939 3433 aa10.96□□□□□ -0.66
COL8A1-203ENST00000452013 A0A1B0GUL7 405 aa10.95□□□□□ -0.66
COL8A1-203ENST00000452013 ZNF280AP59817 542 aaPredicted RBP10.95□□□□□ -0.66
COL8A1-203ENST00000452013 AAMPQ13685 434 aa10.95□□□□□ -0.66
COL8A1-203ENST00000452013 TBC1D22AQ8WUA7 517 aa10.95□□□□□ -0.66
COL8A1-203ENST00000452013 SUPT16HQ9Y5B9 1047 aaKnown RBP10.95□□□□□ -0.66
COL8A1-203ENST00000452013 SEMA3EO15041 775 aa10.94□□□□□ -0.66
COL8A1-203ENST00000452013 RAB11FIP3O75154 756 aa10.94□□□□□ -0.66
COL8A1-203ENST00000452013 CHAF1AQ13111 956 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-203ENST00000452013 TBC1D10BQ4KMP7 808 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-203ENST00000452013 SAMD7Q7Z3H4 446 aa10.94□□□□□ -0.66
COL8A1-203ENST00000452013 CNTROBQ8N137 903 aa10.94□□□□□ -0.66
COL8A1-203ENST00000452013 WDR66Q8TBY9 1149 aa10.94□□□□□ -0.66
COL8A1-203ENST00000452013 XAGE2Q96GT9 111 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms