RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 PPIP5K2O43314 1243 aa12.16□□□□□ -0.46
CCDC171-203ENST00000449575 PDIA4P13667 645 aaKnown RBP12.16□□□□□ -0.46
CCDC171-203ENST00000449575 IL15P40933 162 aaPredicted RBP12.16□□□□□ -0.46
CCDC171-203ENST00000449575 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
CCDC171-203ENST00000449575 WASHC4Q2M389 1173 aa12.16□□□□□ -0.46
CCDC171-203ENST00000449575 ANKRD2Q9GZV1 360 aa12.16□□□□□ -0.46
CCDC171-203ENST00000449575 DBNDD1Q9H9R9 158 aa12.16□□□□□ -0.46
CCDC171-203ENST00000449575 KCNQ5Q9NR82 932 aa12.16□□□□□ -0.46
CCDC171-203ENST00000449575 ARAP2Q8WZ64 1704 aa12.16□□□□□ -0.46
CCDC171-203ENST00000449575 MYH13Q9UKX3 1938 aa12.15□□□□□ -0.46
CCDC171-203ENST00000449575 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
CCDC171-203ENST00000449575 LMNB1P20700 586 aa12.15□□□□□ -0.46
CCDC171-203ENST00000449575 TIMM10P62072 90 aa12.15□□□□□ -0.46
CCDC171-203ENST00000449575 G3BP1Q13283 466 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC171-203ENST00000449575 FGFR2P21802 821 aa12.15□□□□□ -0.46
CCDC171-203ENST00000449575 ATP2B4P23634 1241 aa12.15□□□□□ -0.46
CCDC171-203ENST00000449575 KIAA2012Q0VF49 1180 aa12.15□□□□□ -0.46
CCDC171-203ENST00000449575 IL1RAPL2Q9NP60 686 aa12.15□□□□□ -0.46
CCDC171-203ENST00000449575 ADORA1P30542 326 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 GYG1P46976 350 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 KCNJ4P48050 445 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 OS9Q13438 667 aaPredicted RBP12.14□□□□□ -0.47
CCDC171-203ENST00000449575 GSE1Q14687 1217 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 LARGE2Q8N3Y3 721 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 CEP126Q9P2H0 1117 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 LEMD3Q9Y2U8 911 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 PSME4Q14997 1843 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 YDJCA8MPS7 323 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 SMARCA5O60264 1052 aaPredicted RBP12.14□□□□□ -0.47
CCDC171-203ENST00000449575 HMMRO75330 724 aa12.14□□□□□ -0.47
CCDC171-203ENST00000449575 ZC3H12CQ9C0D7 883 aaKnown RBP12.13□□□□□ -0.47
CCDC171-203ENST00000449575 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
CCDC171-203ENST00000449575 MED23Q9ULK4 1368 aa12.13□□□□□ -0.47
CCDC171-203ENST00000449575 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
CCDC171-203ENST00000449575 GRIPAP1Q4V328 841 aa12.13□□□□□ -0.47
CCDC171-203ENST00000449575 IQSEC3Q9UPP2 1182 aaPredicted RBP12.13□□□□□ -0.47
CCDC171-203ENST00000449575 MYO5AQ9Y4I1 1855 aaKnown RBP12.13□□□□□ -0.47
CCDC171-203ENST00000449575 ZNF609O15014 1411 aa12.13□□□□□ -0.47
CCDC171-203ENST00000449575 A0A1B0GUL7 405 aa12.12□□□□□ -0.47
CCDC171-203ENST00000449575 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
CCDC171-203ENST00000449575 ATP2B3Q16720 1220 aa12.12□□□□□ -0.47
CCDC171-203ENST00000449575 SUPT20HQ8NEM7 779 aa12.12□□□□□ -0.47
CCDC171-203ENST00000449575 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
CCDC171-203ENST00000449575 FAM84BQ96KN1 310 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-203ENST00000449575 TLR7Q9NYK1 1049 aaKnown RBP12.12□□□□□ -0.47
CCDC171-203ENST00000449575 ZNF541Q9H0D2 1346 aa12.12□□□□□ -0.47
CCDC171-203ENST00000449575 BCAMP50895 628 aa12.12□□□□□ -0.47
CCDC171-203ENST00000449575 EAF2Q96CJ1 260 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-203ENST00000449575 JAG2Q9Y219 1238 aa12.12□□□□□ -0.47
CCDC171-203ENST00000449575 AKAP11Q9UKA4 1901 aa12.12□□□□□ -0.47
CCDC171-203ENST00000449575 ECE2O60344 883 aa12.11□□□□□ -0.47
CCDC171-203ENST00000449575 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
CCDC171-203ENST00000449575 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
CCDC171-203ENST00000449575 CCDC8Q9H0W5 538 aaPredicted RBP12.11□□□□□ -0.47
CCDC171-203ENST00000449575 TNNI3KQ59H18 835 aa12.11□□□□□ -0.47
CCDC171-203ENST00000449575 NEUROD6Q96NK8 337 aa12.11□□□□□ -0.47
CCDC171-203ENST00000449575 EYA3Q99504 573 aa12.11□□□□□ -0.47
CCDC171-203ENST00000449575 FPGT-TNNI3KV9GXZ4 949 aa12.11□□□□□ -0.47
CCDC171-203ENST00000449575 RAD17O75943 681 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 AAMPQ13685 434 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 LPIN2Q92539 896 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 XAGE2Q96GT9 111 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 DBNDD2Q9BQY9 259 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 FZD9O00144 591 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 PHKA1P46020 1223 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 JDP2Q8WYK2 163 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 MXD3Q9BW11 206 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 CD209Q9NNX6 404 aa12.1□□□□□ -0.47
CCDC171-203ENST00000449575 CXCL9Q07325 125 aa12.09□□□□□ -0.47
CCDC171-203ENST00000449575 C15orf52Q6ZUT6 534 aaKnown RBP12.09□□□□□ -0.47
CCDC171-203ENST00000449575 C16orf71Q8IYS4 520 aaPredicted RBP12.09□□□□□ -0.47
CCDC171-203ENST00000449575 DBNLQ9UJU6 430 aaKnown RBP12.09□□□□□ -0.47
CCDC171-203ENST00000449575 COL1A1P02452 1464 aaPredicted RBP12.09□□□□□ -0.47
CCDC171-203ENST00000449575 DDNO94850 711 aaPredicted RBP12.09□□□□□ -0.47
CCDC171-203ENST00000449575 IFIT1P09914 478 aaKnown RBP12.09□□□□□ -0.47
CCDC171-203ENST00000449575 SLC5A1P13866 664 aa12.09□□□□□ -0.47
CCDC171-203ENST00000449575 FBXO33Q7Z6M2 555 aa12.09□□□□□ -0.47
CCDC171-203ENST00000449575 KIF1BPQ96EK5 621 aa12.09□□□□□ -0.47
CCDC171-203ENST00000449575 ZNRF3Q9ULT6 936 aa12.09□□□□□ -0.47
CCDC171-203ENST00000449575 HIBADHP31937 336 aaKnown RBP12.08□□□□□ -0.47
CCDC171-203ENST00000449575 AACSQ86V21 672 aa12.08□□□□□ -0.47
CCDC171-203ENST00000449575 FAM43AQ8N2R8 423 aa12.08□□□□□ -0.47
CCDC171-203ENST00000449575 ZNF526Q8TF50 670 aaPredicted RBP12.08□□□□□ -0.47
CCDC171-203ENST00000449575 VPS33BQ9H267 617 aa12.08□□□□□ -0.47
CCDC171-203ENST00000449575 G3V3G9 751 aa12.08□□□□□ -0.48
CCDC171-203ENST00000449575 HSP90AB4PQ58FF6 505 aa12.08□□□□□ -0.48
CCDC171-203ENST00000449575 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
CCDC171-203ENST00000449575 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
CCDC171-203ENST00000449575 PI16Q6UXB8 463 aa12.08□□□□□ -0.48
CCDC171-203ENST00000449575 ERC1Q8IUD2 1116 aa12.08□□□□□ -0.48
CCDC171-203ENST00000449575 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
CCDC171-203ENST00000449575 LRRCC1Q9C099 1032 aa12.08□□□□□ -0.48
CCDC171-203ENST00000449575 RWDD1Q9H446 243 aaPredicted RBP12.08□□□□□ -0.48
CCDC171-203ENST00000449575 BRPF3Q9ULD4 1205 aa12.08□□□□□ -0.48
CCDC171-203ENST00000449575 AKAP2Q9Y2D5 859 aa12.08□□□□□ -0.48
CCDC171-203ENST00000449575 PSMD14O00487 310 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 RAB11FIP3O75154 756 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms