RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 KCNG4Q8TDN1 519 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 ABCC1P33527 1531 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 RAD21O60216 631 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 ATP2C2O75185 946 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 HMGB1P09429 215 aaKnown RBP14.25□□□□□ -0.13
UBE3B-204ENST00000449510 CCT6AP40227 531 aaKnown RBP14.25□□□□□ -0.13
UBE3B-204ENST00000449510 WWC2Q6AWC2 1192 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 CLIC4Q9Y696 253 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 N4BP3O15049 544 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 CLSTN1O94985 981 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 IARSP41252 1262 aaKnown RBP14.24□□□□□ -0.13
UBE3B-204ENST00000449510 EIF5P55010 431 aaKnown RBP14.24□□□□□ -0.13
UBE3B-204ENST00000449510 IRX3P78415 501 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-204ENST00000449510 GOLGA1Q92805 767 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 METAP2P50579 478 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBE3B-204ENST00000449510 SF3A3Q12874 501 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBE3B-204ENST00000449510 CTR9Q6PD62 1173 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 ANKRD13DQ6ZTN6 518 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 ZNF594Q96JF6 807 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-204ENST00000449510 TTC14Q96N46 770 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 CLIC6Q96NY7 704 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 FANCLQ9NW38 375 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 KIAA1468Q9P260 1216 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 ADCY10Q96PN6 1610 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 POLR1AO95602 1720 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-204ENST00000449510 IFIT3O14879 490 aaKnown RBP14.24□□□□□ -0.13
UBE3B-204ENST00000449510 PNMA6AP0CW24 399 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-204ENST00000449510 DHX58Q96C10 678 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 ZKSCAN3Q9BRR0 538 aa14.24□□□□□ -0.13
UBE3B-204ENST00000449510 RPAP1Q9BWH6 1393 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-204ENST00000449510 MYL5Q02045 173 aa14.23□□□□□ -0.13
UBE3B-204ENST00000449510 GOLGA8AA7E2F4 631 aa14.23□□□□□ -0.13
UBE3B-204ENST00000449510 RNF187Q5TA31 235 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-204ENST00000449510 PAXIP1Q6ZW49 1069 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-204ENST00000449510 JADE2Q9NQC1 790 aa14.23□□□□□ -0.13
UBE3B-204ENST00000449510 TDO2P48775 406 aa14.23□□□□□ -0.13
UBE3B-204ENST00000449510 CCDC181Q5TID7 509 aa14.23□□□□□ -0.13
UBE3B-204ENST00000449510 MAP4K1Q92918 833 aa14.23□□□□□ -0.13
UBE3B-204ENST00000449510 RDXP35241 583 aaKnown RBP14.22□□□□□ -0.13
UBE3B-204ENST00000449510 LINS1Q8NG48 757 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 MRFAP1L1Q96HT8 127 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 TBC1D2BQ9UPU7 963 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 NFE2L3Q9Y4A8 694 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 PTCH1Q13635 1447 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 KIAA0754O94854 1291 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 CYP21A2P08686 494 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 ERCC3P19447 782 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 CABP4P57796 275 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 ANKRD7Q92527 254 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 PSMB7Q99436 277 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 TM6SF1Q9BZW5 370 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 ABCF2Q9UG63 623 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 GPTP24298 496 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 GTF2E1P29083 439 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-204ENST00000449510 PAG1Q9NWQ8 432 aa14.22□□□□□ -0.13
UBE3B-204ENST00000449510 hCG_1642624A0A1W2PR95 340 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 CTAGE15A4D2H0 777 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 CTAGE8P0CG41 777 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 NECTIN1Q15223 517 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 CTAGE6Q86UF2 777 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 CTAGE4Q8IX94 777 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 CMTR1Q8N1G2 835 aaKnown RBP14.21□□□□□ -0.13
UBE3B-204ENST00000449510 TMEM87AQ8NBN3 555 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 AIDAQ96BJ3 306 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 PDE11AQ9HCR9 933 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 DACH1Q9UI36 760 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 IQSEC3Q9UPP2 1182 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-204ENST00000449510 CCDC175P0C221 793 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 CHMP4BP1P59074 171 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 SART3Q15020 963 aaKnown RBP14.21□□□□□ -0.13
UBE3B-204ENST00000449510 TMEM67Q5HYA8 995 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 METTL24Q5JXM2 366 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 NFATC2IPQ8NCF5 419 aa14.21□□□□□ -0.13
UBE3B-204ENST00000449510 TRIM66O15016 1216 aa14.21□□□□□ -0.14
UBE3B-204ENST00000449510 ZEB2O60315 1214 aa14.21□□□□□ -0.14
UBE3B-204ENST00000449510 ZMYND10O75800 440 aa14.21□□□□□ -0.14
UBE3B-204ENST00000449510 SLFN14P0C7P3 912 aa14.21□□□□□ -0.14
UBE3B-204ENST00000449510 ADD1P35611 737 aaKnown RBP14.21□□□□□ -0.14
UBE3B-204ENST00000449510 E2F4Q16254 413 aa14.21□□□□□ -0.14
UBE3B-204ENST00000449510 SLC12A7Q9Y666 1083 aa14.21□□□□□ -0.14
UBE3B-204ENST00000449510 ZFYVE9O95405 1425 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 AIFM3Q96NN9 605 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 GOLPH3LQ9H4A5 285 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 ZNHIT6Q9NWK9 470 aaKnown RBP14.2□□□□□ -0.14
UBE3B-204ENST00000449510 POLR2DO15514 142 aaKnown RBP14.2□□□□□ -0.14
UBE3B-204ENST00000449510 ST5P78524 1137 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 COL9A3Q14050 684 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-204ENST00000449510 BEND3Q5T5X7 828 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 ANO1Q5XXA6 986 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 VPS37DQ86XT2 251 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 VPS16Q9H269 839 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 FAM170AA1A519 330 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 TAF5LO75529 589 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 ODF2Q5BJF6 829 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 PLIN2Q99541 437 aa14.2□□□□□ -0.14
UBE3B-204ENST00000449510 MAGEC2Q9UBF1 373 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-204ENST00000449510 CDKL5O76039 1030 aa14.19□□□□□ -0.14
UBE3B-204ENST00000449510 PFKFB1P16118 471 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms