RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 CENPFP49454 3210 aa15.98■□□□□ 0.15
SSR4-205ENST00000447375 PTPN12Q05209 780 aaKnown RBP15.98■□□□□ 0.15
SSR4-205ENST00000447375 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
SSR4-205ENST00000447375 COPS6Q7L5N1 327 aa15.98■□□□□ 0.15
SSR4-205ENST00000447375 ZNF428Q96B54 188 aa15.98■□□□□ 0.15
SSR4-205ENST00000447375 ARMC5Q96C12 935 aa15.98■□□□□ 0.15
SSR4-205ENST00000447375 OTUD5Q96G74 571 aa15.98■□□□□ 0.15
SSR4-205ENST00000447375 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
SSR4-205ENST00000447375 SZT2Q5T011 3432 aa15.97■□□□□ 0.15
SSR4-205ENST00000447375 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
SSR4-205ENST00000447375 XAGE3Q8WTP9 111 aa15.97■□□□□ 0.15
SSR4-205ENST00000447375 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
SSR4-205ENST00000447375 BRCA2P51587 3418 aa15.97■□□□□ 0.15
SSR4-205ENST00000447375 H0YGN5 161 aa15.96■□□□□ 0.15
SSR4-205ENST00000447375 AIMP1Q12904 312 aaKnown RBP15.96■□□□□ 0.15
SSR4-205ENST00000447375 TWISTNBQ3B726 338 aaPredicted RBP15.96■□□□□ 0.15
SSR4-205ENST00000447375 CCDC30Q5VVM6 783 aa15.96■□□□□ 0.15
SSR4-205ENST00000447375 SPRYD7Q5W111 196 aa15.96■□□□□ 0.15
SSR4-205ENST00000447375 ARMC9Q7Z3E5 817 aa15.96■□□□□ 0.15
SSR4-205ENST00000447375 ERO1AQ96HE7 468 aa15.96■□□□□ 0.15
SSR4-205ENST00000447375 GMLQ99445 158 aa15.96■□□□□ 0.15
SSR4-205ENST00000447375 INHBEP58166 350 aa15.95■□□□□ 0.14
SSR4-205ENST00000447375 PRKG1Q13976 671 aa15.95■□□□□ 0.14
SSR4-205ENST00000447375 NBPF9Q3BBW0 867 aa15.95■□□□□ 0.14
SSR4-205ENST00000447375 IFNL1Q8IU54 200 aa15.95■□□□□ 0.14
SSR4-205ENST00000447375 ZNF609O15014 1411 aa15.94■□□□□ 0.14
SSR4-205ENST00000447375 MANSC4A6NHS7 340 aaPredicted RBP15.94■□□□□ 0.14
SSR4-205ENST00000447375 VAMP4O75379 141 aa15.94■□□□□ 0.14
SSR4-205ENST00000447375 UFL1O94874 794 aa15.94■□□□□ 0.14
SSR4-205ENST00000447375 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
SSR4-205ENST00000447375 EXOSC9Q06265 439 aaKnown RBP15.94■□□□□ 0.14
SSR4-205ENST00000447375 CD99L2Q8TCZ2 262 aa15.94■□□□□ 0.14
SSR4-205ENST00000447375 EFCC1Q9HA90 598 aa15.94■□□□□ 0.14
SSR4-205ENST00000447375 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
SSR4-205ENST00000447375 ANKIB1Q9P2G1 1089 aa15.94■□□□□ 0.14
SSR4-205ENST00000447375 RBBP6Q7Z6E9 1792 aaKnown RBP15.94■□□□□ 0.14
SSR4-205ENST00000447375 SCN9AQ15858 1988 aa15.94■□□□□ 0.14
SSR4-205ENST00000447375 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
SSR4-205ENST00000447375 ANKRD13DQ6ZTN6 518 aa15.93■□□□□ 0.14
SSR4-205ENST00000447375 GGA1Q9UJY5 639 aa15.93■□□□□ 0.14
SSR4-205ENST00000447375 USP17L3A6NCW0 530 aa15.92■□□□□ 0.14
SSR4-205ENST00000447375 USP17L4A6NCW7 530 aa15.92■□□□□ 0.14
SSR4-205ENST00000447375 E9PSI1 815 aa15.92■□□□□ 0.14
SSR4-205ENST00000447375 LDLRAD1Q5T700 205 aa15.92■□□□□ 0.14
SSR4-205ENST00000447375 USP17L1Q7RTZ2 530 aa15.92■□□□□ 0.14
SSR4-205ENST00000447375 PLBD2Q8NHP8 589 aa15.92■□□□□ 0.14
SSR4-205ENST00000447375 FAM89AQ96GI7 184 aa15.92■□□□□ 0.14
SSR4-205ENST00000447375 COL4A1P02462 1669 aa15.92■□□□□ 0.14
SSR4-205ENST00000447375 SLFN5Q08AF3 891 aa15.91■□□□□ 0.14
SSR4-205ENST00000447375 SLC4A8Q2Y0W8 1093 aa15.91■□□□□ 0.14
SSR4-205ENST00000447375 SLC10A4Q96EP9 437 aa15.91■□□□□ 0.14
SSR4-205ENST00000447375 ZNF333Q96JL9 665 aa15.91■□□□□ 0.14
SSR4-205ENST00000447375 STK31Q9BXU1 1019 aa15.91■□□□□ 0.14
SSR4-205ENST00000447375 PHAXQ9H814 394 aaKnown RBP15.91■□□□□ 0.14
SSR4-205ENST00000447375 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.91■□□□□ 0.14
SSR4-205ENST00000447375 ANGEL1Q9UNK9 670 aaKnown RBP15.91■□□□□ 0.14
SSR4-205ENST00000447375 IGF2BP3O00425 579 aaKnown RBP eCLIP15.9■□□□□ 0.14
SSR4-205ENST00000447375 WNT10BO00744 389 aa15.9■□□□□ 0.14
SSR4-205ENST00000447375 SP3Q02447 781 aa15.9■□□□□ 0.14
SSR4-205ENST00000447375 PODNQ7Z5L7 613 aa15.9■□□□□ 0.14
SSR4-205ENST00000447375 NBPF11Q86T75 865 aa15.9■□□□□ 0.14
SSR4-205ENST00000447375 TRMT2AQ8IZ69 625 aaKnown RBP15.9■□□□□ 0.14
SSR4-205ENST00000447375 RBM27Q9P2N5 1060 aaKnown RBP15.9■□□□□ 0.14
SSR4-205ENST00000447375 KIAA0100Q14667 2235 aaKnown RBP15.89■□□□□ 0.13
SSR4-205ENST00000447375 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
SSR4-205ENST00000447375 RTL5Q5HYW3 569 aaPredicted RBP15.89■□□□□ 0.13
SSR4-205ENST00000447375 OGFOD1Q8N543 542 aa15.89■□□□□ 0.13
SSR4-205ENST00000447375 ZBTB48P10074 688 aaPredicted RBP15.88■□□□□ 0.13
SSR4-205ENST00000447375 TRIM28Q13263 835 aaKnown RBP15.88■□□□□ 0.13
SSR4-205ENST00000447375 CRHR2Q13324 411 aa15.88■□□□□ 0.13
SSR4-205ENST00000447375 SLC9C1Q4G0N8 1177 aa15.88■□□□□ 0.13
SSR4-205ENST00000447375 OTUD7BQ6GQQ9 843 aa15.88■□□□□ 0.13
SSR4-205ENST00000447375 RIC3Q7Z5B4 369 aa15.88■□□□□ 0.13
SSR4-205ENST00000447375 CDCA7LQ96GN5 454 aa15.88■□□□□ 0.13
SSR4-205ENST00000447375 WNK4Q96J92 1243 aa15.88■□□□□ 0.13
SSR4-205ENST00000447375 FZD1Q9UP38 647 aa15.88■□□□□ 0.13
SSR4-205ENST00000447375 SPEF2Q9C093 1822 aa15.87■□□□□ 0.13
SSR4-205ENST00000447375 ATP5J2-PTCD1G3V325 749 aa15.87■□□□□ 0.13
SSR4-205ENST00000447375 IRS4O14654 1257 aaPredicted RBP15.87■□□□□ 0.13
SSR4-205ENST00000447375 DDX58O95786 925 aaKnown RBP15.87■□□□□ 0.13
SSR4-205ENST00000447375 CAP1Q01518 475 aa15.87■□□□□ 0.13
SSR4-205ENST00000447375 ISCA1Q9BUE6 129 aa15.87■□□□□ 0.13
SSR4-205ENST00000447375 MXD3Q9BW11 206 aa15.87■□□□□ 0.13
SSR4-205ENST00000447375 SEC31BQ9NQW1 1179 aa15.87■□□□□ 0.13
SSR4-205ENST00000447375 SASH1O94885 1247 aa15.86■□□□□ 0.13
SSR4-205ENST00000447375 MYCP01106 439 aaPredicted RBP15.86■□□□□ 0.13
SSR4-205ENST00000447375 G2E3Q7L622 706 aa15.86■□□□□ 0.13
SSR4-205ENST00000447375 APOBEC3FQ8IUX4 373 aaKnown RBP15.86■□□□□ 0.13
SSR4-205ENST00000447375 DPF3Q92784 378 aa15.86■□□□□ 0.13
SSR4-205ENST00000447375 ARHGEF6Q15052 776 aa15.85■□□□□ 0.13
SSR4-205ENST00000447375 DACT2Q5SW24 774 aa15.85■□□□□ 0.13
SSR4-205ENST00000447375 KSR2Q6VAB6 950 aa15.85■□□□□ 0.13
SSR4-205ENST00000447375 CLMNQ96JQ2 1002 aa15.85■□□□□ 0.13
SSR4-205ENST00000447375 PTCH2Q9Y6C5 1203 aa15.85■□□□□ 0.13
SSR4-205ENST00000447375 MYH3P11055 1940 aa15.85■□□□□ 0.13
SSR4-205ENST00000447375 PSME4Q14997 1843 aa15.84■□□□□ 0.13
SSR4-205ENST00000447375 TRIOBPQ9H2D6 2365 aa15.84■□□□□ 0.13
SSR4-205ENST00000447375 PI4KAP2A4QPH2 592 aa15.84■□□□□ 0.13
SSR4-205ENST00000447375 ATP2B4P23634 1241 aa15.84■□□□□ 0.13
SSR4-205ENST00000447375 MAP3K11Q16584 847 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms