RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 SIL1Q9H173 461 aa27.28■■□□□ 1.96
APOE-204ENST00000446996 PSME4Q14997 1843 aa27.27■■□□□ 1.96
APOE-204ENST00000446996 FGFR2P21802 821 aa27.27■■□□□ 1.96
APOE-204ENST00000446996 C1QTNF8P60827 252 aa27.27■■□□□ 1.96
APOE-204ENST00000446996 TXNRD3Q86VQ6 643 aa27.27■■□□□ 1.96
APOE-204ENST00000446996 NOP58Q9Y2X3 529 aaKnown RBP27.27■■□□□ 1.96
APOE-204ENST00000446996 SCN4AP35499 1836 aa27.27■■□□□ 1.96
APOE-204ENST00000446996 SNAP23O00161 211 aa27.26■■□□□ 1.95
APOE-204ENST00000446996 G3BP1Q13283 466 aaKnown RBP eCLIP27.26■■□□□ 1.956e-37■□□□□ 10
APOE-204ENST00000446996 PUM3Q15397 648 aaKnown RBP27.26■■□□□ 1.95
APOE-204ENST00000446996 ZNF526Q8TF50 670 aaPredicted RBP27.26■■□□□ 1.95
APOE-204ENST00000446996 HMMRO75330 724 aa27.25■■□□□ 1.95
APOE-204ENST00000446996 VEGFAP15692 232 aaPredicted RBP27.25■■□□□ 1.95
APOE-204ENST00000446996 ZNF804AQ7Z570 1209 aa27.25■■□□□ 1.95
APOE-204ENST00000446996 LPIN2Q92539 896 aa27.25■■□□□ 1.95
APOE-204ENST00000446996 SCN9AQ15858 1988 aa27.25■■□□□ 1.95
APOE-204ENST00000446996 IFIT1P09914 478 aaKnown RBP27.24■■□□□ 1.95
APOE-204ENST00000446996 AAMPQ13685 434 aa27.24■■□□□ 1.95
APOE-204ENST00000446996 CD209Q9NNX6 404 aa27.24■■□□□ 1.95
APOE-204ENST00000446996 IQCA1LA6NCM1 817 aa27.23■■□□□ 1.95
APOE-204ENST00000446996 KLRK1P26718 216 aa27.23■■□□□ 1.95
APOE-204ENST00000446996 RRAGCQ9HB90 399 aa27.23■■□□□ 1.95
APOE-204ENST00000446996 NMRK2Q9NPI5 230 aa27.23■■□□□ 1.95
APOE-204ENST00000446996 POTECB2RU33 542 aa27.22■■□□□ 1.95
APOE-204ENST00000446996 RAD17O75943 681 aa27.22■■□□□ 1.95
APOE-204ENST00000446996 VIL1P09327 827 aaKnown RBP27.22■■□□□ 1.95
APOE-204ENST00000446996 SLC5A1P13866 664 aa27.22■■□□□ 1.95
APOE-204ENST00000446996 IL1R1P14778 569 aa27.22■■□□□ 1.95
APOE-204ENST00000446996 AKAP2Q9Y2D5 859 aa27.22■■□□□ 1.95
APOE-204ENST00000446996 SUPT16HQ9Y5B9 1047 aaKnown RBP27.22■■□□□ 1.95
APOE-204ENST00000446996 GJA3Q9Y6H8 435 aa27.22■■□□□ 1.95
APOE-204ENST00000446996 KIF3CO14782 793 aa27.21■■□□□ 1.95
APOE-204ENST00000446996 SURF6O75683 361 aaKnown RBP27.21■■□□□ 1.95
APOE-204ENST00000446996 RPS12P25398 132 aaKnown RBP27.21■■□□□ 1.95
APOE-204ENST00000446996 HIBADHP31937 336 aaKnown RBP27.21■■□□□ 1.95
APOE-204ENST00000446996 FBXO33Q7Z6M2 555 aa27.21■■□□□ 1.95
APOE-204ENST00000446996 DPF2Q92785 391 aa27.21■■□□□ 1.95
APOE-204ENST00000446996 FAM84BQ96KN1 310 aaPredicted RBP27.21■■□□□ 1.95
APOE-204ENST00000446996 ZNF609O15014 1411 aa27.21■■□□□ 1.95
APOE-204ENST00000446996 USP17L3A6NCW0 530 aa27.2■■□□□ 1.94
APOE-204ENST00000446996 USP17L4A6NCW7 530 aa27.2■■□□□ 1.94
APOE-204ENST00000446996 PSMD14O00487 310 aa27.2■■□□□ 1.94
APOE-204ENST00000446996 ATP2B3Q16720 1220 aa27.2■■□□□ 1.94
APOE-204ENST00000446996 HSP90AB4PQ58FF6 505 aa27.2■■□□□ 1.94
APOE-204ENST00000446996 CAVIN4Q5BKX8 364 aa27.2■■□□□ 1.94
APOE-204ENST00000446996 STRIP1Q5VSL9 837 aa27.2■■□□□ 1.94
APOE-204ENST00000446996 USP17L1Q7RTZ2 530 aa27.2■■□□□ 1.94
APOE-204ENST00000446996 ZBTB22O15209 634 aa27.19■■□□□ 1.94
APOE-204ENST00000446996 SIRT2Q8IXJ6 389 aa27.19■■□□□ 1.94
APOE-204ENST00000446996 CRBNQ96SW2 442 aa27.19■■□□□ 1.94
APOE-204ENST00000446996 GPR108Q9NPR9 543 aa27.19■■□□□ 1.94
APOE-204ENST00000446996 KCNQ5Q9NR82 932 aa27.19■■□□□ 1.94
APOE-204ENST00000446996 HACL1Q9UJ83 578 aa27.19■■□□□ 1.94
APOE-204ENST00000446996 SASH1O94885 1247 aa27.18■■□□□ 1.94
APOE-204ENST00000446996 AGBL3Q8NEM8 1001 aa27.18■■□□□ 1.94
APOE-204ENST00000446996 TDRD7Q8NHU6 1098 aaKnown RBP27.18■■□□□ 1.94
APOE-204ENST00000446996 LMOD1P29536 600 aaPredicted RBP27.17■■□□□ 1.94
APOE-204ENST00000446996 SCNN1DP51172 638 aa27.17■■□□□ 1.94
APOE-204ENST00000446996 TFCP2Q12800 502 aa27.17■■□□□ 1.94
APOE-204ENST00000446996 ERC1Q8IUD2 1116 aa27.17■■□□□ 1.94
APOE-204ENST00000446996 GYG1P46976 350 aa27.16■■□□□ 1.94
APOE-204ENST00000446996 MMP14P50281 582 aa27.16■■□□□ 1.94
APOE-204ENST00000446996 TTLL5Q6EMB2 1281 aa27.16■■□□□ 1.94
APOE-204ENST00000446996 RSBN1LQ6PCB5 846 aaPredicted RBP27.16■■□□□ 1.94
APOE-204ENST00000446996 GPRC5DQ9NZD1 345 aa27.16■■□□□ 1.94
APOE-204ENST00000446996 ZNF646O15015 1829 aaPredicted RBP27.16■■□□□ 1.94
APOE-204ENST00000446996 MYO3BQ8WXR4 1341 aa27.16■■□□□ 1.94
APOE-204ENST00000446996 GMPSP49915 693 aaPredicted RBP27.15■■□□□ 1.94
APOE-204ENST00000446996 FKBP1AP62942 108 aaKnown RBP27.15■■□□□ 1.94
APOE-204ENST00000446996 OS9Q13438 667 aaPredicted RBP27.15■■□□□ 1.94
APOE-204ENST00000446996 VPS37DQ86XT2 251 aa27.15■■□□□ 1.94
APOE-204ENST00000446996 CEP350Q5VT06 3117 aa27.15■■□□□ 1.94
APOE-204ENST00000446996 ARAP2Q8WZ64 1704 aa27.15■■□□□ 1.94
APOE-204ENST00000446996 DACT2Q5SW24 774 aa27.14■■□□□ 1.94
APOE-204ENST00000446996 TAF1DQ9H5J8 278 aaPredicted RBP27.14■■□□□ 1.94
APOE-204ENST00000446996 FAM205AQ6ZU69 1335 aa27.14■■□□□ 1.93
APOE-204ENST00000446996 PNMA8AQ86V59 439 aaPredicted RBP27.13■■□□□ 1.93
APOE-204ENST00000446996 GMLQ99445 158 aa27.13■■□□□ 1.93
APOE-204ENST00000446996 A0A1B0GUL7 405 aa27.12■■□□□ 1.93
APOE-204ENST00000446996 RAB11FIP3O75154 756 aa27.12■■□□□ 1.93
APOE-204ENST00000446996 TOMM70O94826 608 aa27.12■■□□□ 1.93
APOE-204ENST00000446996 EPHX2P34913 555 aa27.12■■□□□ 1.93
APOE-204ENST00000446996 BCAMP50895 628 aa27.12■■□□□ 1.93
APOE-204ENST00000446996 TIMM10P62072 90 aa27.12■■□□□ 1.93
APOE-204ENST00000446996 GTF2IP78347 998 aa27.12■■□□□ 1.93
APOE-204ENST00000446996 C16orf71Q8IYS4 520 aaPredicted RBP27.12■■□□□ 1.93
APOE-204ENST00000446996 H7C1D1 291 aa27.11■■□□□ 1.93
APOE-204ENST00000446996 ADARB2Q9NS39 739 aaKnown RBP27.11■■□□□ 1.93
APOE-204ENST00000446996 CNOT7Q9UIV1 285 aaKnown RBP27.11■■□□□ 1.93
APOE-204ENST00000446996 ZBTB12Q9Y330 459 aaPredicted RBP27.11■■□□□ 1.93
APOE-204ENST00000446996 EPS15P42566 896 aa27.1■■□□□ 1.93
APOE-204ENST00000446996 USP50Q70EL3 339 aaPredicted RBP27.1■■□□□ 1.93
APOE-204ENST00000446996 RBM46Q8TBY0 533 aaKnown RBP27.1■■□□□ 1.93
APOE-204ENST00000446996 GNL3LQ9NVN8 582 aaKnown RBP27.1■■□□□ 1.93
APOE-204ENST00000446996 EXOC6BQ9Y2D4 811 aa27.1■■□□□ 1.93
APOE-204ENST00000446996 SEMA3EO15041 775 aa27.09■■□□□ 1.93
APOE-204ENST00000446996 TNNI3KQ59H18 835 aa27.09■■□□□ 1.93
APOE-204ENST00000446996 XAGE2Q96GT9 111 aa27.09■■□□□ 1.93
APOE-204ENST00000446996 PCDHB15Q9Y5E8 787 aa27.09■■□□□ 1.93
APOE-204ENST00000446996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms