RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
LINC01271-201ENST00000441214 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
LINC01271-201ENST00000441214 FHOD1Q9Y613 1164 aa16.28■□□□□ 0.2
LINC01271-201ENST00000441214 PALLDQ8WX93 1383 aa16.27■□□□□ 0.2
LINC01271-201ENST00000441214 TRIM37O94972 964 aa16.27■□□□□ 0.2
LINC01271-201ENST00000441214 MAP9Q49MG5 647 aa16.27■□□□□ 0.2
LINC01271-201ENST00000441214 DDX21Q9NR30 783 aaKnown RBP eCLIP16.27■□□□□ 0.2
LINC01271-201ENST00000441214 ARHGAP45Q92619 1136 aa16.26■□□□□ 0.19
LINC01271-201ENST00000441214 H0YHG0 523 aa16.26■□□□□ 0.19
LINC01271-201ENST00000441214 H2AFXP16104 143 aaPredicted RBP16.26■□□□□ 0.19
LINC01271-201ENST00000441214 SARNPP82979 210 aaKnown RBP16.26■□□□□ 0.19
LINC01271-201ENST00000441214 PPP2R5AQ15172 486 aa16.26■□□□□ 0.19
LINC01271-201ENST00000441214 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
LINC01271-201ENST00000441214 LOC102724428A0A0B4J2F2 783 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 MPHOSPH10O00566 681 aaKnown RBP16.25■□□□□ 0.19
LINC01271-201ENST00000441214 SIK1P57059 783 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 ITPK1Q13572 414 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 FAM212AQ96EL1 285 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 BORCS6Q96GS4 357 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.25■□□□□ 0.19
LINC01271-201ENST00000441214 PLA2G4AP47712 749 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 ANAPC15P60006 121 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 E2F4Q16254 413 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 TTLL7Q6ZT98 887 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 ADCY9O60503 1353 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 BTAF1O14981 1849 aa16.25■□□□□ 0.19
LINC01271-201ENST00000441214 SOS1Q07889 1333 aaPredicted RBP16.24■□□□□ 0.19
LINC01271-201ENST00000441214 MEIS3Q99687 375 aa16.24■□□□□ 0.19
LINC01271-201ENST00000441214 ZBTB3Q9H5J0 574 aa16.24■□□□□ 0.19
LINC01271-201ENST00000441214 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
LINC01271-201ENST00000441214 ZBTB1Q9Y2K1 713 aa16.24■□□□□ 0.19
LINC01271-201ENST00000441214 CACNA1FO60840 1977 aa16.24■□□□□ 0.19
LINC01271-201ENST00000441214 ANKRD33BA6NCL7 494 aa16.24■□□□□ 0.19
LINC01271-201ENST00000441214 KIF2AO00139 706 aaPredicted RBP16.24■□□□□ 0.19
LINC01271-201ENST00000441214 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
LINC01271-201ENST00000441214 DDX19BQ9UMR2 479 aa16.24■□□□□ 0.19
LINC01271-201ENST00000441214 NSFL1CQ9UNZ2 370 aaKnown RBP16.24■□□□□ 0.19
LINC01271-201ENST00000441214 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
LINC01271-201ENST00000441214 PNMA6AP0CW24 399 aaPredicted RBP16.23■□□□□ 0.19
LINC01271-201ENST00000441214 LRP10Q7Z4F1 713 aa16.23■□□□□ 0.19
LINC01271-201ENST00000441214 GTF3C6Q969F1 213 aa16.23■□□□□ 0.19
LINC01271-201ENST00000441214 EXOC4Q96A65 974 aa16.23■□□□□ 0.19
LINC01271-201ENST00000441214 SBF2Q86WG5 1849 aa16.23■□□□□ 0.19
LINC01271-201ENST00000441214 ZBTB7BO15156 539 aaPredicted RBP16.22■□□□□ 0.19
LINC01271-201ENST00000441214 CYP19A1P11511 503 aaPredicted RBP16.22■□□□□ 0.19
LINC01271-201ENST00000441214 ARID4AP29374 1257 aaPredicted RBP16.22■□□□□ 0.19
LINC01271-201ENST00000441214 RIC3Q7Z5B4 369 aa16.22■□□□□ 0.19
LINC01271-201ENST00000441214 SMARCE1Q969G3 411 aa16.22■□□□□ 0.19
LINC01271-201ENST00000441214 UBXN6Q9BZV1 441 aa16.22■□□□□ 0.19
LINC01271-201ENST00000441214 CTAGE5O15320 804 aa16.22■□□□□ 0.19
LINC01271-201ENST00000441214 MAFGO15525 162 aa16.22■□□□□ 0.19
LINC01271-201ENST00000441214 ERCC3P19447 782 aa16.22■□□□□ 0.19
LINC01271-201ENST00000441214 IRX1P78414 480 aaPredicted RBP16.22■□□□□ 0.19
LINC01271-201ENST00000441214 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
LINC01271-201ENST00000441214 ZNF215Q9UL58 517 aaPredicted RBP16.22■□□□□ 0.19
LINC01271-201ENST00000441214 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
LINC01271-201ENST00000441214 STARD3NLO95772 234 aa16.21■□□□□ 0.19
LINC01271-201ENST00000441214 ACTN2P35609 894 aa16.21■□□□□ 0.19
LINC01271-201ENST00000441214 HDAC1Q13547 482 aaPredicted RBP16.21■□□□□ 0.19
LINC01271-201ENST00000441214 C16orf45Q96MC5 204 aaPredicted RBP16.21■□□□□ 0.19
LINC01271-201ENST00000441214 PAIP2Q9BPZ3 127 aaKnown RBP16.21■□□□□ 0.19
LINC01271-201ENST00000441214 ATP5J2-PTCD1G3V325 749 aa16.21■□□□□ 0.19
LINC01271-201ENST00000441214 C21orf2O43822 256 aa16.21■□□□□ 0.19
LINC01271-201ENST00000441214 CEP135Q66GS9 1140 aa16.21■□□□□ 0.19
LINC01271-201ENST00000441214 INTS3Q68E01 1043 aaKnown RBP16.21■□□□□ 0.19
LINC01271-201ENST00000441214 ZBTB40Q9NUA8 1239 aa16.21■□□□□ 0.19
LINC01271-201ENST00000441214 TJP1Q07157 1748 aa16.21■□□□□ 0.18
LINC01271-201ENST00000441214 ZC3H12AQ5D1E8 599 aaKnown RBP16.2■□□□□ 0.18
LINC01271-201ENST00000441214 RPS6KA5O75582 802 aa16.2■□□□□ 0.18
LINC01271-201ENST00000441214 SLU7O95391 586 aaKnown RBP16.2■□□□□ 0.18
LINC01271-201ENST00000441214 TPM1P09493 284 aa16.2■□□□□ 0.18
LINC01271-201ENST00000441214 USP8P40818 1118 aa16.2■□□□□ 0.18
LINC01271-201ENST00000441214 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
LINC01271-201ENST00000441214 CORO7P57737 925 aa16.2■□□□□ 0.18
LINC01271-201ENST00000441214 ELF2Q15723 593 aa16.2■□□□□ 0.18
LINC01271-201ENST00000441214 KSR2Q6VAB6 950 aa16.2■□□□□ 0.18
LINC01271-201ENST00000441214 STAG1Q8WVM7 1258 aa16.2■□□□□ 0.18
LINC01271-201ENST00000441214 MYD88Q99836 296 aa16.2■□□□□ 0.18
LINC01271-201ENST00000441214 EIF3CLB5ME19 914 aaKnown RBP16.19■□□□□ 0.18
LINC01271-201ENST00000441214 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
LINC01271-201ENST00000441214 ANKRD13DQ6ZTN6 518 aa16.19■□□□□ 0.18
LINC01271-201ENST00000441214 LINC00116Q8NCU8 138 aa16.19■□□□□ 0.18
LINC01271-201ENST00000441214 EIF3CQ99613 913 aaKnown RBP16.19■□□□□ 0.18
LINC01271-201ENST00000441214 TBC1D2BQ9UPU7 963 aa16.19■□□□□ 0.18
LINC01271-201ENST00000441214 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
LINC01271-201ENST00000441214 FAM196AQ6ZSG2 479 aa16.19■□□□□ 0.18
LINC01271-201ENST00000441214 ZDHHC9Q9Y397 364 aa16.19■□□□□ 0.18
LINC01271-201ENST00000441214 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
LINC01271-201ENST00000441214 AK9Q5TCS8 1911 aa16.18■□□□□ 0.18
LINC01271-201ENST00000441214 ZRANB2O95218 330 aaKnown RBP eCLIP16.18■□□□□ 0.18
LINC01271-201ENST00000441214 SMC2O95347 1197 aa16.18■□□□□ 0.18
LINC01271-201ENST00000441214 IPO7O95373 1038 aaKnown RBP16.18■□□□□ 0.18
LINC01271-201ENST00000441214 ST5P78524 1137 aa16.18■□□□□ 0.18
LINC01271-201ENST00000441214 BEND3Q5T5X7 828 aa16.18■□□□□ 0.18
LINC01271-201ENST00000441214 EFCAB13Q8IY85 973 aa16.18■□□□□ 0.18
LINC01271-201ENST00000441214 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
LINC01271-201ENST00000441214 ARGLU1Q9NWB6 273 aaPredicted RBP16.18■□□□□ 0.18
LINC01271-201ENST00000441214 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
LINC01271-201ENST00000441214 CCDC171Q6TFL3 1326 aa16.18■□□□□ 0.18
LINC01271-201ENST00000441214 SGSM2O43147 1006 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms