RNA–Protein interactions for RNA: ENST00000440697.5

CHD6-205, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-205ENST00000440697 YBX3P16989 372 aaKnown RBP eCLIP10.19□□□□□ -0.78
CHD6-205ENST00000440697 RPS8P62241 208 aaKnown RBP10.19□□□□□ -0.78
CHD6-205ENST00000440697 APBB1IPQ7Z5R6 666 aaPredicted RBP10.19□□□□□ -0.78
CHD6-205ENST00000440697 MICAL1Q8TDZ2 1067 aa10.19□□□□□ -0.78
CHD6-205ENST00000440697 SEC31BQ9NQW1 1179 aa10.19□□□□□ -0.78
CHD6-205ENST00000440697 BCS1LQ9Y276 419 aa10.19□□□□□ -0.78
CHD6-205ENST00000440697 SUPT16HQ9Y5B9 1047 aaKnown RBP10.19□□□□□ -0.78
CHD6-205ENST00000440697 COL4A1P02462 1669 aa10.19□□□□□ -0.78
CHD6-205ENST00000440697 RIOK3O14730 519 aaKnown RBP10.18□□□□□ -0.78
CHD6-205ENST00000440697 GNAI2P04899 355 aa10.18□□□□□ -0.78
CHD6-205ENST00000440697 ITGA6P23229 1130 aa10.18□□□□□ -0.78
CHD6-205ENST00000440697 FAM161AQ3B820 660 aa10.18□□□□□ -0.78
CHD6-205ENST00000440697 TMC4Q7Z404 712 aa10.18□□□□□ -0.78
CHD6-205ENST00000440697 CELF1Q92879 486 aaKnown RBP10.18□□□□□ -0.78
CHD6-205ENST00000440697 CCDC85AQ96PX6 553 aaPredicted RBP10.18□□□□□ -0.78
CHD6-205ENST00000440697 CHMP4BQ9H444 224 aaKnown RBP10.18□□□□□ -0.78
CHD6-205ENST00000440697 ZBTB40Q9NUA8 1239 aa10.18□□□□□ -0.78
CHD6-205ENST00000440697 LRRFIP2Q9Y608 721 aaKnown RBP10.18□□□□□ -0.78
CHD6-205ENST00000440697 IFIT5Q13325 482 aaKnown RBP10.18□□□□□ -0.78
CHD6-205ENST00000440697 MTX1Q13505 466 aa10.18□□□□□ -0.78
CHD6-205ENST00000440697 SP8Q8IXZ3 490 aa10.18□□□□□ -0.78
CHD6-205ENST00000440697 CDC5LQ99459 802 aaKnown RBP10.18□□□□□ -0.78
CHD6-205ENST00000440697 WWC3Q9ULE0 1092 aa10.18□□□□□ -0.78
CHD6-205ENST00000440697 ATP6V0A2Q9Y487 856 aa10.18□□□□□ -0.78
CHD6-205ENST00000440697 FER1L6Q2WGJ9 1857 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 SNED1Q8TER0 1413 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 ANKRD18BA2A2Z9 1011 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 C21orf2O43822 256 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 GRIN3BO60391 1043 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 GPR162Q16538 588 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 CCDC57Q2TAC2 916 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 SOGA3Q5TF21 947 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 ANKRD18AQ8IVF6 992 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 BSDC1Q9NW68 430 aaPredicted RBP10.17□□□□□ -0.78
CHD6-205ENST00000440697 LRRC37AA6NMS7 1700 aa10.17□□□□□ -0.78
CHD6-205ENST00000440697 PPEF1O14829 653 aaPredicted RBP10.16□□□□□ -0.78
CHD6-205ENST00000440697 RFX5P48382 616 aaPredicted RBP10.16□□□□□ -0.78
CHD6-205ENST00000440697 MCCD1P59942 119 aaPredicted RBP10.16□□□□□ -0.78
CHD6-205ENST00000440697 KCNA1Q09470 495 aa10.16□□□□□ -0.78
CHD6-205ENST00000440697 KIAA1522Q9P206 1035 aaPredicted RBP10.16□□□□□ -0.78
CHD6-205ENST00000440697 TESPA1A2RU30 521 aaPredicted RBP10.15□□□□□ -0.78
CHD6-205ENST00000440697 IGHMBP2P38935 993 aaKnown RBP10.15□□□□□ -0.78
CHD6-205ENST00000440697 SREK1Q8WXA9 508 aaKnown RBP10.15□□□□□ -0.78
CHD6-205ENST00000440697 CHMP3Q9Y3E7 222 aa10.15□□□□□ -0.78
CHD6-205ENST00000440697 SPEF2Q9C093 1822 aa10.15□□□□□ -0.79
CHD6-205ENST00000440697 ATP8B2P98198 1209 aa10.15□□□□□ -0.79
CHD6-205ENST00000440697 PTPN12Q05209 780 aaKnown RBP10.15□□□□□ -0.79
CHD6-205ENST00000440697 CCDC93Q567U6 631 aa10.15□□□□□ -0.79
CHD6-205ENST00000440697 OLFM4Q6UX06 510 aa10.15□□□□□ -0.79
CHD6-205ENST00000440697 RTKN2Q8IZC4 609 aa10.15□□□□□ -0.79
CHD6-205ENST00000440697 MPHOSPH8Q99549 860 aa10.15□□□□□ -0.79
CHD6-205ENST00000440697 FAM117AQ9C073 453 aa10.15□□□□□ -0.79
CHD6-205ENST00000440697 MINPP1Q9UNW1 487 aa10.15□□□□□ -0.79
CHD6-205ENST00000440697 LTBP1Q14766 1721 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 SBF1O95248 1867 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 LTBP3Q9NS15 1303 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 PNMA6EA0A0J9YXQ4 647 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 DCAF8L1A6NGE4 600 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 SRGAP3O43295 1099 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 POLA2Q14181 598 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 CEP85Q6P2H3 762 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 SLC51AQ86UW1 340 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 SSH3Q8TE77 659 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 ZNF594Q96JF6 807 aaPredicted RBP10.14□□□□□ -0.79
CHD6-205ENST00000440697 RTFDC1Q9BY42 306 aaPredicted RBP10.14□□□□□ -0.79
CHD6-205ENST00000440697 COPRSQ9NQ92 184 aa10.14□□□□□ -0.79
CHD6-205ENST00000440697 RBM47A0AV96 593 aaKnown RBP10.13□□□□□ -0.79
CHD6-205ENST00000440697 NFKBIEO00221 500 aa10.13□□□□□ -0.79
CHD6-205ENST00000440697 ERCC3P19447 782 aa10.13□□□□□ -0.79
CHD6-205ENST00000440697 LDHAL6AQ6ZMR3 332 aa10.13□□□□□ -0.79
CHD6-205ENST00000440697 ZNF662Q6ZS27 426 aa10.13□□□□□ -0.79
CHD6-205ENST00000440697 ARHGAP27Q6ZUM4 889 aa10.13□□□□□ -0.79
CHD6-205ENST00000440697 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
CHD6-205ENST00000440697 CRBNQ96SW2 442 aa10.13□□□□□ -0.79
CHD6-205ENST00000440697 TMX4Q9H1E5 349 aaPredicted RBP10.13□□□□□ -0.79
CHD6-205ENST00000440697 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
CHD6-205ENST00000440697 CCDC88AQ3V6T2 1871 aa10.13□□□□□ -0.79
CHD6-205ENST00000440697 FKBP4Q02790 459 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHD6-205ENST00000440697 RBM26Q5T8P6 1007 aaKnown RBP10.12□□□□□ -0.79
CHD6-205ENST00000440697 MPNDQ8N594 471 aa10.12□□□□□ -0.79
CHD6-205ENST00000440697 KLHDC4Q8TBB5 520 aa10.12□□□□□ -0.79
CHD6-205ENST00000440697 PUS3Q9BZE2 481 aaKnown RBP10.12□□□□□ -0.79
CHD6-205ENST00000440697 NSFL1CQ9UNZ2 370 aaKnown RBP10.12□□□□□ -0.79
CHD6-205ENST00000440697 CHD4Q14839 1912 aa10.12□□□□□ -0.79
CHD6-205ENST00000440697 A0A1B0GUL6 1792 aa10.12□□□□□ -0.79
CHD6-205ENST00000440697 EYA2O00167 538 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 RAB11FIP3O75154 756 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 CIAO1O76071 339 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 GPSM2P81274 684 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 CHRNDQ07001 517 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 DPP8Q6V1X1 898 aaPredicted RBP10.11□□□□□ -0.79
CHD6-205ENST00000440697 ATG9AQ7Z3C6 839 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 SIRT2Q8IXJ6 389 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 EVI5LQ96CN4 794 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 ANKRD2Q9GZV1 360 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 VPS33BQ9H267 617 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 TAOK3Q9H2K8 898 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 DICER1Q9UPY3 1922 aaKnown RBP10.11□□□□□ -0.79
CHD6-205ENST00000440697 DUOX1Q9NRD9 1551 aa10.11□□□□□ -0.79
CHD6-205ENST00000440697 XDHP47989 1333 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms