RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 DHX40Q8IX18 779 aaKnown RBP10.48□□□□□ -0.73
COPB1-202ENST00000439561 XAGE3Q8WTP9 111 aa10.48□□□□□ -0.73
COPB1-202ENST00000439561 KLF18A0A0U1RQI7 1052 aa10.48□□□□□ -0.73
COPB1-202ENST00000439561 PNMA6AP0CW24 399 aaPredicted RBP10.48□□□□□ -0.73
COPB1-202ENST00000439561 OAS2P29728 719 aaKnown RBP10.48□□□□□ -0.73
COPB1-202ENST00000439561 COPS6Q7L5N1 327 aa10.48□□□□□ -0.73
COPB1-202ENST00000439561 TTC5Q8N0Z6 440 aa10.48□□□□□ -0.73
COPB1-202ENST00000439561 CCDC191Q8NCU4 936 aa10.48□□□□□ -0.73
COPB1-202ENST00000439561 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
COPB1-202ENST00000439561 KIAA1468Q9P260 1216 aa10.48□□□□□ -0.73
COPB1-202ENST00000439561 KIF20BQ96Q89 1820 aa10.48□□□□□ -0.73
COPB1-202ENST00000439561 A0A087WZG4 1122 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 PLEKHG3A1L390 1219 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 ZSCAN12O43309 604 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 CBFA2T2O43439 604 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 HMGB1P09429 215 aaKnown RBP10.47□□□□□ -0.73
COPB1-202ENST00000439561 SYKP43405 635 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 TRDNQ13061 729 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 NBPF6Q5VWK0 638 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 NSUN7Q8NE18 718 aaKnown RBP10.47□□□□□ -0.73
COPB1-202ENST00000439561 NBPF4Q96M43 638 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 ARFGAP3Q9NP61 516 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 CLIC4Q9Y696 253 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 ZNF202O95125 648 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 TIMM10P62072 90 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 ETF1P62495 437 aaKnown RBP10.47□□□□□ -0.73
COPB1-202ENST00000439561 E4F1Q66K89 784 aaPredicted RBP10.47□□□□□ -0.73
COPB1-202ENST00000439561 CDC42BPGQ6DT37 1551 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 KLHL10Q6JEL2 608 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 LEKR1Q6ZMV7 388 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 CCDC82Q8N4S0 544 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 CCDC102AQ96A19 550 aa10.47□□□□□ -0.73
COPB1-202ENST00000439561 GPHNQ9NQX3 736 aaPredicted RBP10.47□□□□□ -0.73
COPB1-202ENST00000439561 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
COPB1-202ENST00000439561 PUF60Q9UHX1 559 aaKnown RBP10.47□□□□□ -0.73
COPB1-202ENST00000439561 PHACTR2O75167 634 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 SARM1Q6SZW1 724 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 NYAP1Q6ZVC0 841 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 GOLGA6L1Q8N7Z2 621 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 CWC15Q9P013 229 aaKnown RBP10.46□□□□□ -0.73
COPB1-202ENST00000439561 RCOR1Q9UKL0 485 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 FRMPD1Q5SYB0 1578 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 DHX16O60231 1041 aaKnown RBP10.46□□□□□ -0.73
COPB1-202ENST00000439561 HSP90B2PQ58FF3 399 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 SPECC1Q5M775 1068 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 ARMCX5Q6P1M9 558 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 CPLX2Q6PUV4 134 aaKnown RBP10.46□□□□□ -0.73
COPB1-202ENST00000439561 LZTFL1Q9NQ48 299 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 TMEM51Q9NW97 253 aa10.46□□□□□ -0.73
COPB1-202ENST00000439561 DBNLQ9UJU6 430 aaKnown RBP10.46□□□□□ -0.73
COPB1-202ENST00000439561 USP6P35125 1406 aa10.46□□□□□ -0.74
COPB1-202ENST00000439561 IFIT1P09914 478 aaKnown RBP10.46□□□□□ -0.74
COPB1-202ENST00000439561 TNNI3KQ59H18 835 aa10.46□□□□□ -0.74
COPB1-202ENST00000439561 ESCO1Q5FWF5 840 aa10.46□□□□□ -0.74
COPB1-202ENST00000439561 NAA16Q6N069 864 aaPredicted RBP10.46□□□□□ -0.74
COPB1-202ENST00000439561 CNNM3Q8NE01 707 aa10.46□□□□□ -0.74
COPB1-202ENST00000439561 KCNG4Q8TDN1 519 aa10.46□□□□□ -0.74
COPB1-202ENST00000439561 NLRP2Q9NX02 1062 aa10.46□□□□□ -0.74
COPB1-202ENST00000439561 FPGT-TNNI3KV9GXZ4 949 aa10.46□□□□□ -0.74
COPB1-202ENST00000439561 CERS3Q8IU89 383 aa10.45□□□□□ -0.74
COPB1-202ENST00000439561 DESI2Q9BSY9 194 aa10.45□□□□□ -0.74
COPB1-202ENST00000439561 IMPACTQ9P2X3 320 aa10.45□□□□□ -0.74
COPB1-202ENST00000439561 DLG5Q8TDM6 1919 aa10.45□□□□□ -0.74
COPB1-202ENST00000439561 TXLNBQ8N3L3 684 aa10.45□□□□□ -0.74
COPB1-202ENST00000439561 CHMP4CQ96CF2 233 aa10.45□□□□□ -0.74
COPB1-202ENST00000439561 SMC1AQ14683 1233 aaKnown RBP10.45□□□□□ -0.74
COPB1-202ENST00000439561 LMBR1LQ6UX01 489 aa10.45□□□□□ -0.74
COPB1-202ENST00000439561 ZNF446Q9NWS9 450 aa10.45□□□□□ -0.74
COPB1-202ENST00000439561 PFKFB2O60825 505 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 ADKP55263 362 aaKnown RBP10.44□□□□□ -0.74
COPB1-202ENST00000439561 PPP2R3AQ06190 1150 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 MTX1Q13505 466 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 KIF4BQ2VIQ3 1234 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 MICU3Q86XE3 530 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 JMYQ8N9B5 988 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 VPS18Q9P253 973 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 TPM1P09493 284 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 PNOCQ13519 176 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 IMMTQ16891 758 aaKnown RBP10.44□□□□□ -0.74
COPB1-202ENST00000439561 ADALQ6DHV7 355 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 PAG1Q9NWQ8 432 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 ADCY9O60503 1353 aa10.44□□□□□ -0.74
COPB1-202ENST00000439561 A0A0G2JLW4 131 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 E7EWF7 191 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 GIGYF1O75420 1035 aaPredicted RBP10.43□□□□□ -0.74
COPB1-202ENST00000439561 PFKFB1P16118 471 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 MYL5Q02045 173 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 EPHA10Q5JZY3 1008 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 JAKMIP3Q5VZ66 844 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 RBM43Q6ZSC3 357 aaKnown RBP10.43□□□□□ -0.74
COPB1-202ENST00000439561 RAPGEF4Q8WZA2 1011 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 IL17RAQ96F46 866 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 LLPHQ9BRT6 129 aaKnown RBP10.43□□□□□ -0.74
COPB1-202ENST00000439561 PRC1O43663 620 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 RHOXF2BP0C7M4 288 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 NLRP12P59046 1061 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 ST5P78524 1137 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 ZSCAN26Q16670 478 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 AKAP4Q5JQC9 854 aa10.43□□□□□ -0.74
COPB1-202ENST00000439561 RRP12Q5JTH9 1297 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms