RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MAP2P11137 1827 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 TAF5LO75529 589 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 PCCAP05165 728 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 IGKV5-2P06315 115 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 SLIT1O75093 1534 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 RUFY3Q7L099 469 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 NUP62CLQ9H1M0 184 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 ORC3Q9UBD5 711 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZDHHC9Q9Y397 364 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 CCDC196A0A1B0GTZ2 297 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 GOLGA8AA7E2F4 631 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 PUM3Q15397 648 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZSCAN22P10073 491 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 TMEM63CQ9P1W3 806 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 WASF1Q92558 559 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 APBA3O96018 575 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 HSPA4P34932 840 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 CTSWP56202 376 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZNF445P59923 1031 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 NAA16Q6N069 864 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 INTS4Q96HW7 963 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 SLC27A2O14975 620 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 POLA2Q14181 598 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 NAT10Q9H0A0 1025 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 TLR7Q9NYK1 1049 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-202ENST00000438773 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 DTNBO60941 627 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 FAM182BQ5T319 152 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 TRIM5Q9C035 493 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 HELLSQ9NRZ9 838 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 PALD1Q9ULE6 856 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 IL6STP40189 918 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 CRKLP46109 303 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 CLEC17AQ6ZS10 378 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 DHX32Q7L7V1 743 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 PUS3Q9BZE2 481 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 PDCL3Q9H2J4 239 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 CYP2E1P05181 493 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 LDHCP07864 332 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZAP70P43403 619 aa13.49□□□□□ -0.25
TRAPPC9-202ENST00000438773 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 KCNQ4P56696 695 aa13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 CBX1P83916 185 aa13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 CAMK4Q16566 473 aa13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 SPTY2D1Q68D10 685 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 CTCFLQ8NI51 663 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 ITSN1Q15811 1721 aa13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 A0A0D9SFI3 127 aa13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 PRC1O43663 620 aa13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 LPIN2Q92539 896 aa13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 CTDP1Q9Y5B0 961 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 IARSP41252 1262 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZNF444Q8N0Y2 327 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 APPBP2Q92624 585 aa13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZNF830Q96NB3 372 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZNF287Q9HBT7 754 aa13.48□□□□□ -0.25
TRAPPC9-202ENST00000438773 BAG3O95817 575 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 CNBD1Q8NA66 436 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 GREM2Q9H772 168 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 CCDC39Q9UFE4 941 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 JAG2Q9Y219 1238 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 SASH1O94885 1247 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 PTH1RQ03431 593 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 PTPN12Q05209 780 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 EPHA10Q5JZY3 1008 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 CCDC47Q96A33 483 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 CRNKL1Q9BZJ0 848 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 TSPY2A6NKD2 308 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 CLSTN1O94985 981 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 MAP3K11Q16584 847 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 OLFM4Q6UX06 510 aa13.47□□□□□ -0.25
TRAPPC9-202ENST00000438773 TPM3P06753 285 aa13.46□□□□□ -0.25
TRAPPC9-202ENST00000438773 HSPA1LP34931 641 aa13.46□□□□□ -0.25
TRAPPC9-202ENST00000438773 SEC62Q99442 399 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-202ENST00000438773 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
TRAPPC9-202ENST00000438773 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.25
TRAPPC9-202ENST00000438773 GPAA1O43292 621 aa13.46□□□□□ -0.25
TRAPPC9-202ENST00000438773 MBD4O95243 580 aa13.46□□□□□ -0.25
TRAPPC9-202ENST00000438773 NOL7Q9UMY1 257 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-202ENST00000438773 ADCY9O60503 1353 aa13.46□□□□□ -0.26
TRAPPC9-202ENST00000438773 ZBTB43O43298 467 aa13.46□□□□□ -0.26
TRAPPC9-202ENST00000438773 PDE4CQ08493 712 aa13.46□□□□□ -0.26
TRAPPC9-202ENST00000438773 CCDC183Q5T5S1 534 aa13.46□□□□□ -0.26
TRAPPC9-202ENST00000438773 CATIPQ7Z7H3 387 aa13.46□□□□□ -0.26
TRAPPC9-202ENST00000438773 CNPY2Q9Y2B0 182 aa13.46□□□□□ -0.26
TRAPPC9-202ENST00000438773 SYT1P21579 422 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 SSRP1Q08945 709 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 WTAPQ15007 396 aa13.45□□□□□ -0.26
TRAPPC9-202ENST00000438773 SKIDA1Q1XH10 827 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms