RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 RTFDC1Q9BY42 306 aaPredicted RBP10.03□□□□□ -0.8
VPS50-204ENST00000438395 GPRC5DQ9NZD1 345 aa10.03□□□□□ -0.8
VPS50-204ENST00000438395 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.03□□□□□ -0.8
VPS50-204ENST00000438395 ATP5J2-PTCD1G3V325 749 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 C6orf229H3BNL8 230 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 FOXN1O15353 648 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 RAD17O75943 681 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 GNAI1P63096 354 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 CXCL9Q07325 125 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.81
VPS50-204ENST00000438395 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 SLC51AQ86UW1 340 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 FAM89AQ96GI7 184 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 IFT57Q9NWB7 429 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 NSFL1CQ9UNZ2 370 aaKnown RBP10.02□□□□□ -0.81
VPS50-204ENST00000438395 COL4A5P29400 1685 aa10.02□□□□□ -0.81
VPS50-204ENST00000438395 H7C1D1 291 aa10.01□□□□□ -0.81
VPS50-204ENST00000438395 IRS4O14654 1257 aaPredicted RBP10.01□□□□□ -0.81
VPS50-204ENST00000438395 EVI5O60447 810 aa10.01□□□□□ -0.81
VPS50-204ENST00000438395 DDX58O95786 925 aaKnown RBP10.01□□□□□ -0.81
VPS50-204ENST00000438395 PBX2P40425 430 aa10.01□□□□□ -0.81
VPS50-204ENST00000438395 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
VPS50-204ENST00000438395 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
VPS50-204ENST00000438395 CAPNS2Q96L46 248 aa10.01□□□□□ -0.81
VPS50-204ENST00000438395 EYA3Q99504 573 aa10.01□□□□□ -0.81
VPS50-204ENST00000438395 PRKRIP1Q9H875 184 aaPredicted RBP10.01□□□□□ -0.81
VPS50-204ENST00000438395 PRDM10Q9NQV6 1147 aa10.01□□□□□ -0.81
VPS50-204ENST00000438395 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
VPS50-204ENST00000438395 TRAF5O00463 557 aa10□□□□□ -0.81
VPS50-204ENST00000438395 ARHGAP33O14559 1287 aa10□□□□□ -0.81
VPS50-204ENST00000438395 APAF1O14727 1248 aa10□□□□□ -0.81
VPS50-204ENST00000438395 CELF2O95319 508 aaKnown RBP10□□□□□ -0.81
VPS50-204ENST00000438395 MAP3K9P80192 1104 aa10□□□□□ -0.81
VPS50-204ENST00000438395 PPP4R3BQ5MIZ7 849 aa10□□□□□ -0.81
VPS50-204ENST00000438395 RNF166Q96A37 237 aaPredicted RBP10□□□□□ -0.81
VPS50-204ENST00000438395 ISCA1Q9BUE6 129 aa10□□□□□ -0.81
VPS50-204ENST00000438395 ZNF408Q9H9D4 720 aa10□□□□□ -0.81
VPS50-204ENST00000438395 ADAMTSL1Q8N6G6 1762 aa9.99□□□□□ -0.81
VPS50-204ENST00000438395 ELL2O00472 640 aaPredicted RBP9.99□□□□□ -0.81
VPS50-204ENST00000438395 TRIM28Q13263 835 aaKnown RBP9.99□□□□□ -0.81
VPS50-204ENST00000438395 SF3B3Q15393 1217 aaKnown RBP9.99□□□□□ -0.81
VPS50-204ENST00000438395 CCDC152Q4G0S7 254 aa9.99□□□□□ -0.81
VPS50-204ENST00000438395 CCDC30Q5VVM6 783 aa9.99□□□□□ -0.81
VPS50-204ENST00000438395 ZC3H15Q8WU90 426 aaKnown RBP9.99□□□□□ -0.81
VPS50-204ENST00000438395 STK31Q9BXU1 1019 aa9.99□□□□□ -0.81
VPS50-204ENST00000438395 WBP1LQ9NX94 342 aa9.99□□□□□ -0.81
VPS50-204ENST00000438395 ANKIB1Q9P2G1 1089 aa9.99□□□□□ -0.81
VPS50-204ENST00000438395 ANKRD36CQ5JPF3 1778 aa9.98□□□□□ -0.81
VPS50-204ENST00000438395 RPS12P25398 132 aaKnown RBP9.98□□□□□ -0.81
VPS50-204ENST00000438395 LBX1P52954 281 aa9.98□□□□□ -0.81
VPS50-204ENST00000438395 RPS8P62241 208 aaKnown RBP9.98□□□□□ -0.81
VPS50-204ENST00000438395 NEXNQ0ZGT2 675 aa9.98□□□□□ -0.81
VPS50-204ENST00000438395 CDC37L1Q7L3B6 337 aa9.98□□□□□ -0.81
VPS50-204ENST00000438395 ZBTB38Q8NAP3 1195 aaPredicted RBP9.98□□□□□ -0.81
VPS50-204ENST00000438395 CELF1Q92879 486 aaKnown RBP9.98□□□□□ -0.81
VPS50-204ENST00000438395 GPR101Q96P66 508 aaPredicted RBP9.98□□□□□ -0.81
VPS50-204ENST00000438395 KCNK17Q96T54 332 aa9.98□□□□□ -0.81
VPS50-204ENST00000438395 MYD88Q99836 296 aa9.98□□□□□ -0.81
VPS50-204ENST00000438395 GLIS2Q9BZE0 524 aaPredicted RBP9.98□□□□□ -0.81
VPS50-204ENST00000438395 ZC3H12CQ9C0D7 883 aaKnown RBP9.98□□□□□ -0.81
VPS50-204ENST00000438395 DBNDD1Q9H9R9 158 aa9.98□□□□□ -0.81
VPS50-204ENST00000438395 CWC25Q9NXE8 425 aaPredicted RBP9.98□□□□□ -0.81
VPS50-204ENST00000438395 CNOT7Q9UIV1 285 aaKnown RBP9.98□□□□□ -0.81
VPS50-204ENST00000438395 TLL2Q9Y6L7 1015 aa9.98□□□□□ -0.81
VPS50-204ENST00000438395 PSMD14O00487 310 aa9.97□□□□□ -0.81
VPS50-204ENST00000438395 ECE2O60344 883 aa9.97□□□□□ -0.81
VPS50-204ENST00000438395 UFL1O94874 794 aa9.97□□□□□ -0.81
VPS50-204ENST00000438395 GPSM2P81274 684 aa9.97□□□□□ -0.81
VPS50-204ENST00000438395 FMR1Q06787 632 aaKnown RBP eCLIP9.97□□□□□ -0.814e-6■■■■□ 21.6
VPS50-204ENST00000438395 CYP4F22Q6NT55 531 aa9.97□□□□□ -0.81
VPS50-204ENST00000438395 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
VPS50-204ENST00000438395 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
VPS50-204ENST00000438395 DPF2Q92785 391 aa9.97□□□□□ -0.81
VPS50-204ENST00000438395 GGA1Q9UJY5 639 aa9.97□□□□□ -0.81
VPS50-204ENST00000438395 LTBP1Q14766 1721 aa9.96□□□□□ -0.81
VPS50-204ENST00000438395 CA12O43570 354 aa9.96□□□□□ -0.82
VPS50-204ENST00000438395 PCCAP05165 728 aaPredicted RBP9.96□□□□□ -0.82
VPS50-204ENST00000438395 ZNF853P0CG23 659 aa9.96□□□□□ -0.82
VPS50-204ENST00000438395 HSPA8P11142 646 aaKnown RBP9.96□□□□□ -0.82
VPS50-204ENST00000438395 TBC1D10BQ4KMP7 808 aaPredicted RBP9.96□□□□□ -0.82
VPS50-204ENST00000438395 KRT26Q7Z3Y9 468 aa9.96□□□□□ -0.82
VPS50-204ENST00000438395 ANKRD18AQ8IVF6 992 aa9.96□□□□□ -0.82
VPS50-204ENST00000438395 DCPSQ96C86 337 aaKnown RBP9.96□□□□□ -0.82
VPS50-204ENST00000438395 CDC5LQ99459 802 aaKnown RBP9.96□□□□□ -0.82
VPS50-204ENST00000438395 PHAXQ9H814 394 aaKnown RBP9.96□□□□□ -0.82
VPS50-204ENST00000438395 YDJCA8MPS7 323 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 PDE8AO60658 829 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 MAP2K2P36507 400 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 FOSBP53539 338 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 RBM26Q5T8P6 1007 aaKnown RBP9.95□□□□□ -0.82
VPS50-204ENST00000438395 CST9Q5W186 159 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 SAPCD2Q86UD0 394 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 SULF1Q8IWU6 871 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 C8orf58Q8NAV2 365 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 TBC1D16Q8TBP0 767 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
VPS50-204ENST00000438395 METTL22Q9BUU2 404 aaPredicted RBP9.95□□□□□ -0.82
VPS50-204ENST00000438395 POLLQ9UGP5 575 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms