RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SLC51AQ86UW1 340 aa28.05■■■□□ 2.08
CPSF4-204ENST00000436336 NSFL1CQ9UNZ2 370 aaKnown RBP28.05■■■□□ 2.08
CPSF4-204ENST00000436336 TRIM6-TRIM34B2RNG4 842 aa28.04■■■□□ 2.08
CPSF4-204ENST00000436336 ATP2B4P23634 1241 aa28.04■■■□□ 2.08
CPSF4-204ENST00000436336 CCDC102BQ68D86 513 aa28.04■■■□□ 2.08
CPSF4-204ENST00000436336 KCNA3P22001 575 aa28.04■■■□□ 2.08
CPSF4-204ENST00000436336 A0A0G2JLW4 131 aa28.03■■■□□ 2.08
CPSF4-204ENST00000436336 C8orf34Q49A92 452 aa28.03■■■□□ 2.08
CPSF4-204ENST00000436336 CNTROBQ8N137 903 aa28.03■■■□□ 2.08
CPSF4-204ENST00000436336 HAUS7Q99871 368 aa28.03■■■□□ 2.08
CPSF4-204ENST00000436336 WTIPA6NIX2 430 aaPredicted RBP28.02■■■□□ 2.08
CPSF4-204ENST00000436336 UQCRFS1P1P0C7P4 283 aa28.02■■■□□ 2.08
CPSF4-204ENST00000436336 TTLL6Q8N841 843 aa28.02■■■□□ 2.08
CPSF4-204ENST00000436336 RILPL2Q969X0 211 aa28.02■■■□□ 2.08
CPSF4-204ENST00000436336 GGA1Q9UJY5 639 aa28.02■■■□□ 2.08
CPSF4-204ENST00000436336 MAP4K4O95819 1239 aaPredicted RBP28.01■■■□□ 2.07
CPSF4-204ENST00000436336 ARID4AP29374 1257 aaPredicted RBP28.01■■■□□ 2.07
CPSF4-204ENST00000436336 PHKA1P46020 1223 aa28.01■■■□□ 2.07
CPSF4-204ENST00000436336 CAVIN4Q5BKX8 364 aa28.01■■■□□ 2.07
CPSF4-204ENST00000436336 IRS2Q9Y4H2 1338 aa28■■■□□ 2.07
CPSF4-204ENST00000436336 C15orf52Q6ZUT6 534 aaKnown RBP28■■■□□ 2.07
CPSF4-204ENST00000436336 EVI5LQ96CN4 794 aa28■■■□□ 2.07
CPSF4-204ENST00000436336 PPP1R1BQ9UD71 204 aaPredicted RBP28■■■□□ 2.07
CPSF4-204ENST00000436336 DUOX1Q9NRD9 1551 aa28■■■□□ 2.07
CPSF4-204ENST00000436336 UFL1O94874 794 aa27.99■■■□□ 2.07
CPSF4-204ENST00000436336 BCAMP50895 628 aa27.99■■■□□ 2.07
CPSF4-204ENST00000436336 CC2D2BQ6DHV5 1058 aa27.99■■■□□ 2.07
CPSF4-204ENST00000436336 MPNDQ8N594 471 aa27.99■■■□□ 2.07
CPSF4-204ENST00000436336 TBC1D16Q8TBP0 767 aa27.99■■■□□ 2.07
CPSF4-204ENST00000436336 CDC45O75419 566 aa27.98■■■□□ 2.07
CPSF4-204ENST00000436336 GYG1P46976 350 aa27.98■■■□□ 2.07
CPSF4-204ENST00000436336 C7orf43Q8WVR3 580 aa27.98■■■□□ 2.07
CPSF4-204ENST00000436336 FAM84BQ96KN1 310 aaPredicted RBP27.98■■■□□ 2.07
CPSF4-204ENST00000436336 DNAJC2Q99543 621 aaKnown RBP27.98■■■□□ 2.07
CPSF4-204ENST00000436336 BACH2Q9BYV9 841 aa27.98■■■□□ 2.07
CPSF4-204ENST00000436336 PIM2Q9P1W9 311 aa27.98■■■□□ 2.07
CPSF4-204ENST00000436336 KLHL34Q8N239 644 aa27.98■■■□□ 2.07
CPSF4-204ENST00000436336 KLRK1P26718 216 aa27.97■■■□□ 2.07
CPSF4-204ENST00000436336 MCAMP43121 646 aa27.97■■■□□ 2.07
CPSF4-204ENST00000436336 OLFM4Q6UX06 510 aa27.97■■■□□ 2.07
CPSF4-204ENST00000436336 DPP8Q6V1X1 898 aaPredicted RBP27.97■■■□□ 2.07
CPSF4-204ENST00000436336 FBXO33Q7Z6M2 555 aa27.97■■■□□ 2.07
CPSF4-204ENST00000436336 VPS37DQ86XT2 251 aa27.97■■■□□ 2.07
CPSF4-204ENST00000436336 GNL3LQ9NVN8 582 aaKnown RBP27.97■■■□□ 2.07
CPSF4-204ENST00000436336 POLLQ9UGP5 575 aa27.97■■■□□ 2.07
CPSF4-204ENST00000436336 MYH7P12883 1935 aa27.97■■■□□ 2.07
CPSF4-204ENST00000436336 SCARF1Q14162 830 aa27.96■■■□□ 2.07
CPSF4-204ENST00000436336 MED23Q9ULK4 1368 aa27.96■■■□□ 2.07
CPSF4-204ENST00000436336 PAG1Q9NWQ8 432 aa27.95■■■□□ 2.07
CPSF4-204ENST00000436336 C6orf229H3BNL8 230 aa27.95■■■□□ 2.06
CPSF4-204ENST00000436336 HIBADHP31937 336 aaKnown RBP27.95■■■□□ 2.06
CPSF4-204ENST00000436336 GRIPAP1Q4V328 841 aa27.95■■■□□ 2.06
CPSF4-204ENST00000436336 TXNRD3Q86VQ6 643 aa27.95■■■□□ 2.06
CPSF4-204ENST00000436336 NDUFB9Q9Y6M9 179 aa27.95■■■□□ 2.06
CPSF4-204ENST00000436336 DOCK2Q92608 1830 aa27.94■■■□□ 2.06
CPSF4-204ENST00000436336 SNED1Q8TER0 1413 aa27.94■■■□□ 2.06
CPSF4-204ENST00000436336 MYO5AQ9Y4I1 1855 aaKnown RBP27.94■■■□□ 2.06
CPSF4-204ENST00000436336 ZBTB22O15209 634 aa27.94■■■□□ 2.06
CPSF4-204ENST00000436336 TBC1D9Q6ZT07 1266 aa27.94■■■□□ 2.06
CPSF4-204ENST00000436336 FKBP4Q02790 459 aaKnown RBP eCLIP27.93■■■□□ 2.06
CPSF4-204ENST00000436336 CASC1Q6TDU7 716 aa27.93■■■□□ 2.06
CPSF4-204ENST00000436336 EDC3Q96F86 508 aaKnown RBP27.93■■■□□ 2.06
CPSF4-204ENST00000436336 ZNF219Q9P2Y4 722 aaPredicted RBP27.93■■■□□ 2.06
CPSF4-204ENST00000436336 GOLIM4O00461 696 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 SEMA3EO15041 775 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 ZAP70P43403 619 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 RASGRF1Q13972 1273 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 ZNF804AQ7Z570 1209 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 SNRKQ9NRH2 765 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 HMG20BQ9P0W2 317 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 C21orf2O43822 256 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 SPATA5Q8NB90 893 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 GPR101Q96P66 508 aaPredicted RBP27.92■■■□□ 2.06
CPSF4-204ENST00000436336 ARFGEF1Q9Y6D6 1849 aa27.92■■■□□ 2.06
CPSF4-204ENST00000436336 DALRD3Q5D0E6 543 aaKnown RBP27.91■■■□□ 2.06
CPSF4-204ENST00000436336 PI16Q6UXB8 463 aa27.91■■■□□ 2.06
CPSF4-204ENST00000436336 FSD1Q9BTV5 496 aa27.91■■■□□ 2.06
CPSF4-204ENST00000436336 RFX7Q2KHR2 1363 aa27.91■■■□□ 2.06
CPSF4-204ENST00000436336 CCDC93Q567U6 631 aa27.9■■■□□ 2.06
CPSF4-204ENST00000436336 SOGA3Q5TF21 947 aa27.9■■■□□ 2.06
CPSF4-204ENST00000436336 TICAM2Q86XR7 235 aa27.9■■■□□ 2.06
CPSF4-204ENST00000436336 KBTBD3Q8NAB2 608 aa27.9■■■□□ 2.06
CPSF4-204ENST00000436336 EYA3Q99504 573 aa27.9■■■□□ 2.06
CPSF4-204ENST00000436336 RTFDC1Q9BY42 306 aaPredicted RBP27.9■■■□□ 2.06
CPSF4-204ENST00000436336 DENND2AQ9ULE3 1009 aa27.9■■■□□ 2.06
CPSF4-204ENST00000436336 SOCS7O14512 581 aa27.89■■■□□ 2.06
CPSF4-204ENST00000436336 CHMLP26374 656 aa27.89■■■□□ 2.06
CPSF4-204ENST00000436336 TTF1Q15361 905 aaPredicted RBP27.89■■■□□ 2.06
CPSF4-204ENST00000436336 ANTXR1Q9H6X2 564 aa27.89■■■□□ 2.05
CPSF4-204ENST00000436336 FER1L6Q2WGJ9 1857 aa27.88■■■□□ 2.05
CPSF4-204ENST00000436336 PDS5AQ29RF7 1337 aaKnown RBP27.88■■■□□ 2.05
CPSF4-204ENST00000436336 HIP1O00291 1037 aa27.88■■■□□ 2.05
CPSF4-204ENST00000436336 CYP2E1P05181 493 aaPredicted RBP27.88■■■□□ 2.05
CPSF4-204ENST00000436336 RTKN2Q8IZC4 609 aa27.88■■■□□ 2.05
CPSF4-204ENST00000436336 ZC3H12CQ9C0D7 883 aaKnown RBP27.88■■■□□ 2.05
CPSF4-204ENST00000436336 IQSEC3Q9UPP2 1182 aaPredicted RBP27.88■■■□□ 2.05
CPSF4-204ENST00000436336 SUPT20HQ8NEM7 779 aa27.87■■■□□ 2.05
CPSF4-204ENST00000436336 COL1A1P02452 1464 aaPredicted RBP27.87■■■□□ 2.05
CPSF4-204ENST00000436336 FRAT2O75474 233 aaPredicted RBP27.87■■■□□ 2.05
CPSF4-204ENST00000436336 WASHC4Q2M389 1173 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms