RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 FGD1P98174 961 aa19.82■□□□□ 0.76
LIMK1-203ENST00000435201 VGLL2Q8N8G2 317 aa19.82■□□□□ 0.76
LIMK1-203ENST00000435201 CTNNA3Q9UI47 895 aa19.82■□□□□ 0.76
LIMK1-203ENST00000435201 ARAP2Q8WZ64 1704 aa19.81■□□□□ 0.76
LIMK1-203ENST00000435201 STK3Q13188 491 aa19.81■□□□□ 0.76
LIMK1-203ENST00000435201 INTS5Q6P9B9 1019 aaKnown RBP19.81■□□□□ 0.76
LIMK1-203ENST00000435201 BARGINQ6ZT62 677 aa19.81■□□□□ 0.76
LIMK1-203ENST00000435201 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
LIMK1-203ENST00000435201 APPBP2Q92624 585 aa19.81■□□□□ 0.76
LIMK1-203ENST00000435201 OSBP2Q969R2 916 aa19.81■□□□□ 0.76
LIMK1-203ENST00000435201 AKAP11Q9UKA4 1901 aa19.81■□□□□ 0.76
LIMK1-203ENST00000435201 E7EWF7 191 aa19.8■□□□□ 0.76
LIMK1-203ENST00000435201 LETM1O95202 739 aaPredicted RBP19.8■□□□□ 0.76
LIMK1-203ENST00000435201 ATP6V1AP38606 617 aa19.8■□□□□ 0.76
LIMK1-203ENST00000435201 ZAP70P43403 619 aa19.8■□□□□ 0.76
LIMK1-203ENST00000435201 DNM1Q05193 864 aaKnown RBP19.8■□□□□ 0.76
LIMK1-203ENST00000435201 SCARF1Q14162 830 aa19.8■□□□□ 0.76
LIMK1-203ENST00000435201 CCDC183Q5T5S1 534 aa19.8■□□□□ 0.76
LIMK1-203ENST00000435201 ZSCAN25Q6NSZ9 544 aa19.8■□□□□ 0.76
LIMK1-203ENST00000435201 LLPHQ9BRT6 129 aaKnown RBP19.8■□□□□ 0.76
LIMK1-203ENST00000435201 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.8■□□□□ 0.76
LIMK1-203ENST00000435201 SLIT2O94813 1529 aa19.8■□□□□ 0.76
LIMK1-203ENST00000435201 PDE8BO95263 885 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 EXOSC10Q01780 885 aaKnown RBP19.79■□□□□ 0.76
LIMK1-203ENST00000435201 WASHC4Q2M389 1173 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 CDC37L1Q7L3B6 337 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 MARCH10Q8NA82 808 aaPredicted RBP19.79■□□□□ 0.76
LIMK1-203ENST00000435201 BRF1Q92994 677 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 AGXT2Q9BYV1 514 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 MROH5Q6ZUA9 1318 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 LOC102724428A0A0B4J2F2 783 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 PFKFB2O60825 505 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 CRKLP46109 303 aaKnown RBP19.79■□□□□ 0.76
LIMK1-203ENST00000435201 SIK1P57059 783 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 KRT85P78386 507 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 TTF1Q15361 905 aaPredicted RBP19.79■□□□□ 0.76
LIMK1-203ENST00000435201 PARP10Q53GL7 1025 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 CHMP4CQ96CF2 233 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 TSPY26PQ9H489 355 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 LAMB2P55268 1798 aa19.79■□□□□ 0.76
LIMK1-203ENST00000435201 RRAGDQ9NQL2 400 aaPredicted RBP19.78■□□□□ 0.76
LIMK1-203ENST00000435201 MCAMP43121 646 aa19.77■□□□□ 0.76
LIMK1-203ENST00000435201 ACSBG1Q96GR2 724 aa19.77■□□□□ 0.76
LIMK1-203ENST00000435201 ATRNO75882 1429 aa19.77■□□□□ 0.76
LIMK1-203ENST00000435201 A0A0G2JS52 829 aa19.77■□□□□ 0.76
LIMK1-203ENST00000435201 ELP1O95163 1332 aa19.77■□□□□ 0.76
LIMK1-203ENST00000435201 UQCRFS1P1P0C7P4 283 aa19.77■□□□□ 0.76
LIMK1-203ENST00000435201 PUM3Q15397 648 aaKnown RBP19.77■□□□□ 0.76
LIMK1-203ENST00000435201 IMMTQ16891 758 aaKnown RBP19.77■□□□□ 0.76
LIMK1-203ENST00000435201 ZNF831Q5JPB2 1677 aa19.77■□□□□ 0.76
LIMK1-203ENST00000435201 FBXL16Q8N461 479 aa19.77■□□□□ 0.76
LIMK1-203ENST00000435201 SMARCC1Q92922 1105 aaPredicted RBP19.77■□□□□ 0.76
LIMK1-203ENST00000435201 UTP14AQ9BVJ6 771 aaKnown RBP19.77■□□□□ 0.76
LIMK1-203ENST00000435201 DDX60Q8IY21 1712 aaKnown RBP19.76■□□□□ 0.75
LIMK1-203ENST00000435201 DTNBO60941 627 aa19.76■□□□□ 0.75
LIMK1-203ENST00000435201 SCRN1Q12765 414 aa19.76■□□□□ 0.75
LIMK1-203ENST00000435201 SMARCC2Q8TAQ2 1214 aa19.76■□□□□ 0.75
LIMK1-203ENST00000435201 COL5A3P25940 1745 aaPredicted RBP19.76■□□□□ 0.75
LIMK1-203ENST00000435201 ARID4AP29374 1257 aaPredicted RBP19.75■□□□□ 0.75
LIMK1-203ENST00000435201 SUSD4Q5VX71 490 aa19.75■□□□□ 0.75
LIMK1-203ENST00000435201 LPIN2Q92539 896 aa19.75■□□□□ 0.75
LIMK1-203ENST00000435201 LRRC2Q9BYS8 371 aa19.75■□□□□ 0.75
LIMK1-203ENST00000435201 KIF3AQ9Y496 699 aa19.75■□□□□ 0.75
LIMK1-203ENST00000435201 JAK2O60674 1132 aa19.75■□□□□ 0.75
LIMK1-203ENST00000435201 CAMTA2O94983 1202 aa19.75■□□□□ 0.75
LIMK1-203ENST00000435201 HMGN5P82970 282 aaKnown RBP19.75■□□□□ 0.75
LIMK1-203ENST00000435201 MYH14Q7Z406 1995 aaKnown RBP19.75■□□□□ 0.75
LIMK1-203ENST00000435201 BCORQ6W2J9 1755 aa19.74■□□□□ 0.75
LIMK1-203ENST00000435201 RTL9Q8NET4 1388 aa19.74■□□□□ 0.75
LIMK1-203ENST00000435201 NUTM2BA6NNL0 878 aaPredicted RBP19.74■□□□□ 0.75
LIMK1-203ENST00000435201 NUTM2EB1AL46 878 aaPredicted RBP19.74■□□□□ 0.75
LIMK1-203ENST00000435201 ADD2P35612 726 aa19.74■□□□□ 0.75
LIMK1-203ENST00000435201 ITPK1Q13572 414 aa19.74■□□□□ 0.75
LIMK1-203ENST00000435201 PI16Q6UXB8 463 aa19.74■□□□□ 0.75
LIMK1-203ENST00000435201 FERMT3Q86UX7 667 aa19.74■□□□□ 0.75
LIMK1-203ENST00000435201 NUTM2AQ8IVF1 878 aaPredicted RBP19.74■□□□□ 0.75
LIMK1-203ENST00000435201 FAM184AQ8NB25 1140 aa19.74■□□□□ 0.75
LIMK1-203ENST00000435201 ZNF274Q96GC6 653 aaPredicted RBP19.74■□□□□ 0.75
LIMK1-203ENST00000435201 SCAND2PQ9GZW5 306 aaPredicted RBP19.74■□□□□ 0.75
LIMK1-203ENST00000435201 PUS7LQ9H0K6 701 aaKnown RBP19.74■□□□□ 0.75
LIMK1-203ENST00000435201 ESPNB1AK53 854 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 FOXP2O15409 715 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 GPAA1O43292 621 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 FGFR2P21802 821 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 UBE3CQ15386 1083 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 CCDC102BQ68D86 513 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 TTLL5Q6EMB2 1281 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 PDLIM2Q96JY6 352 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 SLC5A1P13866 664 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 APOBRQ0VD83 1088 aa19.73■□□□□ 0.75
LIMK1-203ENST00000435201 H3BQV1 296 aa19.72■□□□□ 0.75
LIMK1-203ENST00000435201 FGAP02671 866 aa19.72■□□□□ 0.75
LIMK1-203ENST00000435201 CLCN1P35523 988 aa19.72■□□□□ 0.75
LIMK1-203ENST00000435201 CCDC152Q4G0S7 254 aa19.72■□□□□ 0.75
LIMK1-203ENST00000435201 IFFO2Q5TF58 517 aa19.72■□□□□ 0.75
LIMK1-203ENST00000435201 NSUN7Q8NE18 718 aaKnown RBP19.72■□□□□ 0.75
LIMK1-203ENST00000435201 ZSCAN16Q9H4T2 348 aaPredicted RBP19.72■□□□□ 0.75
LIMK1-203ENST00000435201 ZNF652Q9Y2D9 606 aa19.72■□□□□ 0.75
LIMK1-203ENST00000435201 HCLS1P14317 486 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms