RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 SSH3Q8TE77 659 aa23.1■■□□□ 1.29
DDR1-236ENST00000431373 NMRK2Q9NPI5 230 aa23.1■■□□□ 1.29
DDR1-236ENST00000431373 GJA3Q9Y6H8 435 aa23.1■■□□□ 1.29
DDR1-236ENST00000431373 IRS2Q9Y4H2 1338 aa23.09■■□□□ 1.29
DDR1-236ENST00000431373 RAD17O75943 681 aa23.09■■□□□ 1.29
DDR1-236ENST00000431373 COA1Q9GZY4 146 aa23.09■■□□□ 1.29
DDR1-236ENST00000431373 TNIP1Q15025 636 aa23.08■■□□□ 1.29
DDR1-236ENST00000431373 PODNQ7Z5L7 613 aa23.08■■□□□ 1.29
DDR1-236ENST00000431373 L3MBTL3Q96JM7 780 aaPredicted RBP23.08■■□□□ 1.29
DDR1-236ENST00000431373 RRAGCQ9HB90 399 aa23.08■■□□□ 1.29
DDR1-236ENST00000431373 CEP126Q9P2H0 1117 aa23.07■■□□□ 1.28
DDR1-236ENST00000431373 ZNF646O15015 1829 aaPredicted RBP23.06■■□□□ 1.28
DDR1-236ENST00000431373 VEGFAP15692 232 aaPredicted RBP23.06■■□□□ 1.28
DDR1-236ENST00000431373 PUM3Q15397 648 aaKnown RBP23.06■■□□□ 1.28
DDR1-236ENST00000431373 ZNF804AQ7Z570 1209 aa23.06■■□□□ 1.28
DDR1-236ENST00000431373 G3BP1Q13283 466 aaKnown RBP eCLIP23.05■■□□□ 1.28
DDR1-236ENST00000431373 RPAP2Q8IXW5 612 aaPredicted RBP23.05■■□□□ 1.28
DDR1-236ENST00000431373 KCNQ5Q9NR82 932 aa23.05■■□□□ 1.28
DDR1-236ENST00000431373 ARAP2Q8WZ64 1704 aa23.05■■□□□ 1.28
DDR1-236ENST00000431373 POTECB2RU33 542 aa23.04■■□□□ 1.28
DDR1-236ENST00000431373 PSMD14O00487 310 aa23.04■■□□□ 1.28
DDR1-236ENST00000431373 KIF3CO14782 793 aa23.04■■□□□ 1.28
DDR1-236ENST00000431373 FGFR2P21802 821 aa23.04■■□□□ 1.28
DDR1-236ENST00000431373 SUPT16HQ9Y5B9 1047 aaKnown RBP23.04■■□□□ 1.28
DDR1-236ENST00000431373 IQCA1LA6NCM1 817 aa23.03■■□□□ 1.28
DDR1-236ENST00000431373 IFIT1P09914 478 aaKnown RBP23.03■■□□□ 1.28
DDR1-236ENST00000431373 SLC5A1P13866 664 aa23.03■■□□□ 1.28
DDR1-236ENST00000431373 LPIN2Q92539 896 aa23.03■■□□□ 1.28
DDR1-236ENST00000431373 CD209Q9NNX6 404 aa23.03■■□□□ 1.28
DDR1-236ENST00000431373 MYH13Q9UKX3 1938 aa23.02■■□□□ 1.28
DDR1-236ENST00000431373 SURF6O75683 361 aaKnown RBP23.02■■□□□ 1.28
DDR1-236ENST00000431373 ATP2B3Q16720 1220 aa23.02■■□□□ 1.28
DDR1-236ENST00000431373 CRBNQ96SW2 442 aa23.02■■□□□ 1.28
DDR1-236ENST00000431373 USP17L3A6NCW0 530 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 USP17L4A6NCW7 530 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 HMMRO75330 724 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 VIL1P09327 827 aaKnown RBP23.01■■□□□ 1.27
DDR1-236ENST00000431373 IL1R1P14778 569 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 LMOD1P29536 600 aaPredicted RBP23.01■■□□□ 1.27
DDR1-236ENST00000431373 HIBADHP31937 336 aaKnown RBP23.01■■□□□ 1.27
DDR1-236ENST00000431373 GYG1P46976 350 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 GMPSP49915 693 aaPredicted RBP23.01■■□□□ 1.27
DDR1-236ENST00000431373 SCNN1DP51172 638 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 TFCP2Q12800 502 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 CAVIN4Q5BKX8 364 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 USP17L1Q7RTZ2 530 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 FAM84BQ96KN1 310 aaPredicted RBP23.01■■□□□ 1.27
DDR1-236ENST00000431373 HACL1Q9UJ83 578 aa23.01■■□□□ 1.27
DDR1-236ENST00000431373 NOP58Q9Y2X3 529 aaKnown RBP23.01■■□□□ 1.27
DDR1-236ENST00000431373 OS9Q13438 667 aaPredicted RBP23■■□□□ 1.27
DDR1-236ENST00000431373 SIRT2Q8IXJ6 389 aa23■■□□□ 1.27
DDR1-236ENST00000431373 C16orf71Q8IYS4 520 aaPredicted RBP23■■□□□ 1.27
DDR1-236ENST00000431373 ZBTB12Q9Y330 459 aaPredicted RBP23■■□□□ 1.27
DDR1-236ENST00000431373 RPS12P25398 132 aaKnown RBP22.99■■□□□ 1.27
DDR1-236ENST00000431373 FBXO33Q7Z6M2 555 aa22.99■■□□□ 1.27
DDR1-236ENST00000431373 VPS37DQ86XT2 251 aa22.99■■□□□ 1.27
DDR1-236ENST00000431373 FBXW7Q969H0 707 aa22.99■■□□□ 1.27
DDR1-236ENST00000431373 GPRC5DQ9NZD1 345 aa22.99■■□□□ 1.27
DDR1-236ENST00000431373 AKAP2Q9Y2D5 859 aa22.99■■□□□ 1.27
DDR1-236ENST00000431373 ZNF609O15014 1411 aa22.99■■□□□ 1.27
DDR1-236ENST00000431373 SASH1O94885 1247 aa22.98■■□□□ 1.27
DDR1-236ENST00000431373 EPHX2P34913 555 aa22.98■■□□□ 1.27
DDR1-236ENST00000431373 STRIP1Q5VSL9 837 aa22.98■■□□□ 1.27
DDR1-236ENST00000431373 TTLL5Q6EMB2 1281 aa22.98■■□□□ 1.27
DDR1-236ENST00000431373 RSBN1LQ6PCB5 846 aaPredicted RBP22.98■■□□□ 1.27
DDR1-236ENST00000431373 DPF2Q92785 391 aa22.98■■□□□ 1.27
DDR1-236ENST00000431373 TAF1DQ9H5J8 278 aaPredicted RBP22.98■■□□□ 1.27
DDR1-236ENST00000431373 EPS15P42566 896 aa22.97■■□□□ 1.27
DDR1-236ENST00000431373 GTF2IP78347 998 aa22.97■■□□□ 1.27
DDR1-236ENST00000431373 DACT2Q5SW24 774 aa22.97■■□□□ 1.27
DDR1-236ENST00000431373 TDRD7Q8NHU6 1098 aaKnown RBP22.97■■□□□ 1.27
DDR1-236ENST00000431373 A0A1B0GUL7 405 aa22.96■■□□□ 1.27
DDR1-236ENST00000431373 BCAMP50895 628 aa22.96■■□□□ 1.27
DDR1-236ENST00000431373 HSP90AB4PQ58FF6 505 aa22.96■■□□□ 1.27
DDR1-236ENST00000431373 AGBL3Q8NEM8 1001 aa22.96■■□□□ 1.27
DDR1-236ENST00000431373 EXOC6BQ9Y2D4 811 aa22.96■■□□□ 1.27
DDR1-236ENST00000431373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.96■■□□□ 1.27
DDR1-236ENST00000431373 TIMM10P62072 90 aa22.95■■□□□ 1.26
DDR1-236ENST00000431373 ERC1Q8IUD2 1116 aa22.95■■□□□ 1.26
DDR1-236ENST00000431373 MYO3BQ8WXR4 1341 aa22.95■■□□□ 1.26
DDR1-236ENST00000431373 CNOT7Q9UIV1 285 aaKnown RBP22.95■■□□□ 1.26
DDR1-236ENST00000431373 TOMM70O94826 608 aa22.94■■□□□ 1.26
DDR1-236ENST00000431373 MICALL2Q8IY33 904 aa22.94■■□□□ 1.26
DDR1-236ENST00000431373 GMLQ99445 158 aa22.94■■□□□ 1.26
DDR1-236ENST00000431373 GPR108Q9NPR9 543 aa22.94■■□□□ 1.26
DDR1-236ENST00000431373 ADARB2Q9NS39 739 aaKnown RBP22.94■■□□□ 1.26
DDR1-236ENST00000431373 ADAMTSL1Q8N6G6 1762 aa22.94■■□□□ 1.26
DDR1-236ENST00000431373 FAM205AQ6ZU69 1335 aa22.93■■□□□ 1.26
DDR1-236ENST00000431373 H7C1D1 291 aa22.93■■□□□ 1.26
DDR1-236ENST00000431373 FRAT2O75474 233 aaPredicted RBP22.93■■□□□ 1.26
DDR1-236ENST00000431373 ADORA1P30542 326 aa22.93■■□□□ 1.26
DDR1-236ENST00000431373 EAPPQ56P03 285 aaPredicted RBP22.93■■□□□ 1.26
DDR1-236ENST00000431373 PNMA8AQ86V59 439 aaPredicted RBP22.93■■□□□ 1.26
DDR1-236ENST00000431373 NEUROD6Q96NK8 337 aa22.93■■□□□ 1.26
DDR1-236ENST00000431373 MXD3Q9BW11 206 aa22.93■■□□□ 1.26
DDR1-236ENST00000431373 IQSEC3Q9UPP2 1182 aaPredicted RBP22.93■■□□□ 1.26
DDR1-236ENST00000431373 AAMPQ13685 434 aa22.92■■□□□ 1.26
DDR1-236ENST00000431373 RBM46Q8TBY0 533 aaKnown RBP22.92■■□□□ 1.26
DDR1-236ENST00000431373 XAGE2Q96GT9 111 aa22.92■■□□□ 1.26
DDR1-236ENST00000431373 SHTN1A0MZ66 631 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms