RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 UBE4AQ14139 1066 aa21.67■■□□□ 1.06
CTDSP1-203ENST00000431127 METTL24Q5JXM2 366 aa21.67■■□□□ 1.06
CTDSP1-203ENST00000431127 TXNRD3Q86VQ6 643 aa21.67■■□□□ 1.06
CTDSP1-203ENST00000431127 KLHDC4Q8TBB5 520 aa21.67■■□□□ 1.06
CTDSP1-203ENST00000431127 DPF2Q92785 391 aa21.67■■□□□ 1.06
CTDSP1-203ENST00000431127 EYA2O00167 538 aa21.66■■□□□ 1.06
CTDSP1-203ENST00000431127 VIL1P09327 827 aaKnown RBP21.66■■□□□ 1.06
CTDSP1-203ENST00000431127 EPS15P42566 896 aa21.66■■□□□ 1.06
CTDSP1-203ENST00000431127 LRRC24Q50LG9 513 aa21.66■■□□□ 1.06
CTDSP1-203ENST00000431127 LDHDQ86WU2 507 aa21.66■■□□□ 1.06
CTDSP1-203ENST00000431127 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.66■■□□□ 1.06
CTDSP1-203ENST00000431127 KCNQ5Q9NR82 932 aa21.66■■□□□ 1.06
CTDSP1-203ENST00000431127 USP17L3A6NCW0 530 aa21.65■■□□□ 1.06
CTDSP1-203ENST00000431127 USP17L4A6NCW7 530 aa21.65■■□□□ 1.06
CTDSP1-203ENST00000431127 SRGAP3O43295 1099 aa21.65■■□□□ 1.06
CTDSP1-203ENST00000431127 CIAO1O76071 339 aa21.65■■□□□ 1.06
CTDSP1-203ENST00000431127 KLRK1P26718 216 aa21.65■■□□□ 1.06
CTDSP1-203ENST00000431127 EAPPQ56P03 285 aaPredicted RBP21.65■■□□□ 1.06
CTDSP1-203ENST00000431127 USP17L1Q7RTZ2 530 aa21.65■■□□□ 1.06
CTDSP1-203ENST00000431127 ZNF804AQ7Z570 1209 aa21.65■■□□□ 1.06
CTDSP1-203ENST00000431127 ADARB2Q9NS39 739 aaKnown RBP21.65■■□□□ 1.06
CTDSP1-203ENST00000431127 SNAP23O00161 211 aa21.64■■□□□ 1.05
CTDSP1-203ENST00000431127 ZBTB7BO15156 539 aaPredicted RBP21.64■■□□□ 1.05
CTDSP1-203ENST00000431127 PDE8BO95263 885 aa21.64■■□□□ 1.05
CTDSP1-203ENST00000431127 CHADLQ6NUI6 762 aa21.64■■□□□ 1.05
CTDSP1-203ENST00000431127 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.05
CTDSP1-203ENST00000431127 PANK1Q8TE04 598 aa21.64■■□□□ 1.05
CTDSP1-203ENST00000431127 IRS2Q9Y4H2 1338 aa21.63■■□□□ 1.05
CTDSP1-203ENST00000431127 H7C1D1 291 aa21.63■■□□□ 1.05
CTDSP1-203ENST00000431127 AGBL3Q8NEM8 1001 aa21.63■■□□□ 1.05
CTDSP1-203ENST00000431127 COPRSQ9NQ92 184 aa21.63■■□□□ 1.05
CTDSP1-203ENST00000431127 CNOT7Q9UIV1 285 aaKnown RBP21.63■■□□□ 1.05
CTDSP1-203ENST00000431127 ZBTB12Q9Y330 459 aaPredicted RBP21.63■■□□□ 1.05
CTDSP1-203ENST00000431127 STRIP1Q5VSL9 837 aa21.62■■□□□ 1.05
CTDSP1-203ENST00000431127 RSBN1LQ6PCB5 846 aaPredicted RBP21.62■■□□□ 1.05
CTDSP1-203ENST00000431127 VGLL2Q8N8G2 317 aa21.62■■□□□ 1.05
CTDSP1-203ENST00000431127 CD209Q9NNX6 404 aa21.62■■□□□ 1.05
CTDSP1-203ENST00000431127 POTEIP0CG38 1075 aa21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 POTEJP0CG39 1038 aa21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 IL15P40933 162 aaPredicted RBP21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 PUM3Q15397 648 aaKnown RBP21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 ATG9AQ7Z3C6 839 aa21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 MICALL2Q8IY33 904 aa21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 SIL1Q9H173 461 aa21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 CHMP4BQ9H444 224 aaKnown RBP21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 CLEC11AQ9Y240 323 aa21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 ZNF609O15014 1411 aa21.61■■□□□ 1.05
CTDSP1-203ENST00000431127 IL1R1P14778 569 aa21.6■■□□□ 1.05
CTDSP1-203ENST00000431127 PDE3AQ14432 1141 aa21.6■■□□□ 1.05
CTDSP1-203ENST00000431127 MVPQ14764 893 aaKnown RBP21.6■■□□□ 1.05
CTDSP1-203ENST00000431127 TTLL5Q6EMB2 1281 aa21.6■■□□□ 1.05
CTDSP1-203ENST00000431127 CEP126Q9P2H0 1117 aa21.6■■□□□ 1.05
CTDSP1-203ENST00000431127 MYO3BQ8WXR4 1341 aa21.59■■□□□ 1.05
CTDSP1-203ENST00000431127 A0A1B0GUL6 1792 aa21.59■■□□□ 1.05
CTDSP1-203ENST00000431127 IFIT1P09914 478 aaKnown RBP21.59■■□□□ 1.05
CTDSP1-203ENST00000431127 HIBADHP31937 336 aaKnown RBP21.59■■□□□ 1.05
CTDSP1-203ENST00000431127 CAVIN4Q5BKX8 364 aa21.59■■□□□ 1.05
CTDSP1-203ENST00000431127 DDX19BQ9UMR2 479 aa21.59■■□□□ 1.05
CTDSP1-203ENST00000431127 PA2G4Q9UQ80 394 aaKnown RBP21.59■■□□□ 1.05
CTDSP1-203ENST00000431127 SCN9AQ15858 1988 aa21.59■■□□□ 1.05
CTDSP1-203ENST00000431127 ATP8B2P98198 1209 aa21.58■■□□□ 1.05
CTDSP1-203ENST00000431127 DACT2Q5SW24 774 aa21.58■■□□□ 1.05
CTDSP1-203ENST00000431127 VPS37DQ86XT2 251 aa21.58■■□□□ 1.05
CTDSP1-203ENST00000431127 FBXW7Q969H0 707 aa21.58■■□□□ 1.05
CTDSP1-203ENST00000431127 PNMA6EA0A0J9YXQ4 647 aa21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 SLC5A1P13866 664 aa21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 FGFR2P21802 821 aa21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 MMP14P50281 582 aa21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 GTF2IP78347 998 aa21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 ZC3H15Q8WU90 426 aaKnown RBP21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 LPIN2Q92539 896 aa21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 FAM84BQ96KN1 310 aaPredicted RBP21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 GMLQ99445 158 aa21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 COG6Q9Y2V7 657 aa21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 PCNTO95613 3336 aa21.57■■□□□ 1.04
CTDSP1-203ENST00000431127 SASH1O94885 1247 aa21.56■■□□□ 1.04
CTDSP1-203ENST00000431127 USP17L8P0C7I0 530 aa21.56■■□□□ 1.04
CTDSP1-203ENST00000431127 GYG1P46976 350 aa21.56■■□□□ 1.04
CTDSP1-203ENST00000431127 C1orf115Q9H7X2 142 aa21.56■■□□□ 1.04
CTDSP1-203ENST00000431127 ZNF280AP59817 542 aaPredicted RBP21.55■■□□□ 1.04
CTDSP1-203ENST00000431127 POLA2Q14181 598 aa21.55■■□□□ 1.04
CTDSP1-203ENST00000431127 FBXO33Q7Z6M2 555 aa21.55■■□□□ 1.04
CTDSP1-203ENST00000431127 OGFOD1Q8N543 542 aa21.55■■□□□ 1.04
CTDSP1-203ENST00000431127 TDRD7Q8NHU6 1098 aaKnown RBP21.55■■□□□ 1.04
CTDSP1-203ENST00000431127 SSH3Q8TE77 659 aa21.55■■□□□ 1.04
CTDSP1-203ENST00000431127 CREBZFQ9NS37 354 aa21.55■■□□□ 1.04
CTDSP1-203ENST00000431127 PSME4Q14997 1843 aa21.55■■□□□ 1.04
CTDSP1-203ENST00000431127 SHTN1A0MZ66 631 aa21.54■■□□□ 1.04
CTDSP1-203ENST00000431127 G3BP1Q13283 466 aaKnown RBP eCLIP21.54■■□□□ 1.04
CTDSP1-203ENST00000431127 ATP2B3Q16720 1220 aa21.54■■□□□ 1.04
CTDSP1-203ENST00000431127 CNTROBQ8N137 903 aa21.54■■□□□ 1.04
CTDSP1-203ENST00000431127 TRPM4Q8TD43 1214 aa21.54■■□□□ 1.04
CTDSP1-203ENST00000431127 ADAMTSL1Q8N6G6 1762 aa21.53■■□□□ 1.04
CTDSP1-203ENST00000431127 FKBP1AP62942 108 aaKnown RBP21.53■■□□□ 1.04
CTDSP1-203ENST00000431127 COL13A1Q5TAT6 717 aaPredicted RBP21.53■■□□□ 1.04
CTDSP1-203ENST00000431127 MAP1SQ66K74 1059 aaPredicted RBP21.53■■□□□ 1.04
CTDSP1-203ENST00000431127 SAMD7Q7Z3H4 446 aa21.53■■□□□ 1.04
CTDSP1-203ENST00000431127 PGAP2Q9UHJ9 254 aa21.53■■□□□ 1.04
CTDSP1-203ENST00000431127 AKAP2Q9Y2D5 859 aa21.53■■□□□ 1.04
CTDSP1-203ENST00000431127 FAM205AQ6ZU69 1335 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms