RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
PCCA-206ENST00000428969 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
PCCA-206ENST00000428969 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
PCCA-206ENST00000428969 NBPF9Q3BBW0 867 aa16.71■□□□□ 0.27
PCCA-206ENST00000428969 DACT2Q5SW24 774 aa16.71■□□□□ 0.27
PCCA-206ENST00000428969 PRPF38BQ5VTL8 546 aaKnown RBP16.71■□□□□ 0.27
PCCA-206ENST00000428969 TTLL11Q8NHH1 800 aa16.71■□□□□ 0.27
PCCA-206ENST00000428969 ZNF296Q8WUU4 475 aaPredicted RBP16.71■□□□□ 0.27
PCCA-206ENST00000428969 MINPP1Q9UNW1 487 aa16.71■□□□□ 0.27
PCCA-206ENST00000428969 MAP3K2Q9Y2U5 619 aa16.71■□□□□ 0.27
PCCA-206ENST00000428969 WNT10BO00744 389 aa16.7■□□□□ 0.26
PCCA-206ENST00000428969 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
PCCA-206ENST00000428969 NEXNQ0ZGT2 675 aa16.7■□□□□ 0.26
PCCA-206ENST00000428969 SREBF2Q12772 1141 aa16.7■□□□□ 0.26
PCCA-206ENST00000428969 DDX10Q13206 875 aaKnown RBP16.7■□□□□ 0.26
PCCA-206ENST00000428969 TTLL12Q14166 644 aaPredicted RBP16.7■□□□□ 0.26
PCCA-206ENST00000428969 KSR2Q6VAB6 950 aa16.7■□□□□ 0.26
PCCA-206ENST00000428969 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
PCCA-206ENST00000428969 CFHR5Q9BXR6 569 aa16.7■□□□□ 0.26
PCCA-206ENST00000428969 LEMD3Q9Y2U8 911 aa16.7■□□□□ 0.26
PCCA-206ENST00000428969 ZNF646O15015 1829 aaPredicted RBP16.7■□□□□ 0.26
PCCA-206ENST00000428969 APAF1O14727 1248 aa16.69■□□□□ 0.26
PCCA-206ENST00000428969 MOB2Q70IA6 237 aa16.69■□□□□ 0.26
PCCA-206ENST00000428969 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
PCCA-206ENST00000428969 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
PCCA-206ENST00000428969 PI4KAP2A4QPH2 592 aa16.68■□□□□ 0.26
PCCA-206ENST00000428969 GPR25O00155 361 aa16.68■□□□□ 0.26
PCCA-206ENST00000428969 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
PCCA-206ENST00000428969 IGKV5-2P06315 115 aa16.68■□□□□ 0.26
PCCA-206ENST00000428969 APOBEC3FQ8IUX4 373 aaKnown RBP16.68■□□□□ 0.26
PCCA-206ENST00000428969 PI4KAP1Q8N8J0 262 aa16.68■□□□□ 0.26
PCCA-206ENST00000428969 GREM2Q9H772 168 aa16.68■□□□□ 0.26
PCCA-206ENST00000428969 COL1A1P02452 1464 aaPredicted RBP16.67■□□□□ 0.26
PCCA-206ENST00000428969 IGHMBP2P38935 993 aaKnown RBP16.67■□□□□ 0.26
PCCA-206ENST00000428969 PRAMEF18Q5VWM3 479 aa16.67■□□□□ 0.26
PCCA-206ENST00000428969 FBXO46Q6PJ61 603 aaPredicted RBP16.67■□□□□ 0.26
PCCA-206ENST00000428969 ANKRD2Q9GZV1 360 aa16.67■□□□□ 0.26
PCCA-206ENST00000428969 SPEF2Q9C093 1822 aa16.67■□□□□ 0.26
PCCA-206ENST00000428969 WTIPA6NIX2 430 aaPredicted RBP16.66■□□□□ 0.26
PCCA-206ENST00000428969 ALDH1A1P00352 501 aa16.66■□□□□ 0.26
PCCA-206ENST00000428969 TTLL5Q6EMB2 1281 aa16.66■□□□□ 0.26
PCCA-206ENST00000428969 FBXW7Q969H0 707 aa16.66■□□□□ 0.26
PCCA-206ENST00000428969 STK31Q9BXU1 1019 aa16.66■□□□□ 0.26
PCCA-206ENST00000428969 SCAF8Q9UPN6 1271 aaKnown RBP16.66■□□□□ 0.26
PCCA-206ENST00000428969 NEURL1BA8MQ27 555 aa16.65■□□□□ 0.26
PCCA-206ENST00000428969 MXD3Q9BW11 206 aa16.65■□□□□ 0.26
PCCA-206ENST00000428969 PLA2G12BQ9BX93 195 aa16.65■□□□□ 0.26
PCCA-206ENST00000428969 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
PCCA-206ENST00000428969 ZNF804BA4D1E1 1349 aa16.65■□□□□ 0.26
PCCA-206ENST00000428969 H7C1W4 665 aa16.64■□□□□ 0.25
PCCA-206ENST00000428969 FKTNO75072 461 aa16.64■□□□□ 0.25
PCCA-206ENST00000428969 SASH1O94885 1247 aa16.64■□□□□ 0.25
PCCA-206ENST00000428969 INHBEP58166 350 aa16.64■□□□□ 0.25
PCCA-206ENST00000428969 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.25
PCCA-206ENST00000428969 LDLRAD1Q5T700 205 aa16.64■□□□□ 0.25
PCCA-206ENST00000428969 TXNRD3Q86VQ6 643 aa16.64■□□□□ 0.25
PCCA-206ENST00000428969 ZBED3Q96IU2 234 aaPredicted RBP16.64■□□□□ 0.25
PCCA-206ENST00000428969 CWF19L2Q2TBE0 894 aaKnown RBP16.63■□□□□ 0.25
PCCA-206ENST00000428969 SPRYD7Q5W111 196 aa16.63■□□□□ 0.25
PCCA-206ENST00000428969 UBE3BQ7Z3V4 1068 aa16.63■□□□□ 0.25
PCCA-206ENST00000428969 KIAA0825Q8IV33 1275 aa16.63■□□□□ 0.25
PCCA-206ENST00000428969 TSPYL6Q8N831 410 aa16.63■□□□□ 0.25
PCCA-206ENST00000428969 MPHOSPH8Q99549 860 aa16.63■□□□□ 0.25
PCCA-206ENST00000428969 PPP2R3BQ9Y5P8 575 aa16.63■□□□□ 0.25
PCCA-206ENST00000428969 MANSC4A6NHS7 340 aaPredicted RBP16.62■□□□□ 0.25
PCCA-206ENST00000428969 UNCXA6NJT0 531 aa16.62■□□□□ 0.25
PCCA-206ENST00000428969 ITGA6P23229 1130 aa16.62■□□□□ 0.25
PCCA-206ENST00000428969 MKRN3Q13064 507 aaKnown RBP16.62■□□□□ 0.25
PCCA-206ENST00000428969 CSF1RP07333 972 aa16.61■□□□□ 0.25
PCCA-206ENST00000428969 ZBTB48P10074 688 aaPredicted RBP16.61■□□□□ 0.25
PCCA-206ENST00000428969 KCNJ4P48050 445 aa16.61■□□□□ 0.25
PCCA-206ENST00000428969 GTF2IP78347 998 aa16.61■□□□□ 0.25
PCCA-206ENST00000428969 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
PCCA-206ENST00000428969 MTMR14Q8NCE2 650 aa16.61■□□□□ 0.25
PCCA-206ENST00000428969 DEFB129Q9H1M3 183 aa16.61■□□□□ 0.25
PCCA-206ENST00000428969 MYH16Q9H6N6 1097 aa16.61■□□□□ 0.25
PCCA-206ENST00000428969 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
PCCA-206ENST00000428969 LAMB1P07942 1786 aa16.61■□□□□ 0.25
PCCA-206ENST00000428969 PPP1R12BO60237 982 aaPredicted RBP16.6■□□□□ 0.25
PCCA-206ENST00000428969 GCKRQ14397 625 aa16.6■□□□□ 0.25
PCCA-206ENST00000428969 DLGAP5Q15398 846 aa16.6■□□□□ 0.25
PCCA-206ENST00000428969 CD209Q9NNX6 404 aa16.6■□□□□ 0.25
PCCA-206ENST00000428969 ECM29Q5VYK3 1845 aa16.59■□□□□ 0.25
PCCA-206ENST00000428969 CACNA1FO60840 1977 aa16.59■□□□□ 0.25
PCCA-206ENST00000428969 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
PCCA-206ENST00000428969 KLRK1P26718 216 aa16.59■□□□□ 0.25
PCCA-206ENST00000428969 CHRNDQ07001 517 aa16.59■□□□□ 0.25
PCCA-206ENST00000428969 PRKG1Q13976 671 aa16.59■□□□□ 0.25
PCCA-206ENST00000428969 CCDC27Q2M243 656 aa16.59■□□□□ 0.25
PCCA-206ENST00000428969 TWISTNBQ3B726 338 aaPredicted RBP16.59■□□□□ 0.25
PCCA-206ENST00000428969 C15orf52Q6ZUT6 534 aaKnown RBP16.59■□□□□ 0.25
PCCA-206ENST00000428969 GCC1Q96CN9 775 aa16.59■□□□□ 0.25
PCCA-206ENST00000428969 SLC10A4Q96EP9 437 aa16.59■□□□□ 0.25
PCCA-206ENST00000428969 MYO1BO43795 1136 aa16.58■□□□□ 0.24
PCCA-206ENST00000428969 CASP7P55210 303 aa16.58■□□□□ 0.24
PCCA-206ENST00000428969 FKBP1AP62942 108 aaKnown RBP16.58■□□□□ 0.24
PCCA-206ENST00000428969 SUPT20HL1Q3ZLR7 823 aa16.58■□□□□ 0.24
PCCA-206ENST00000428969 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
PCCA-206ENST00000428969 IFNL1Q8IU54 200 aa16.58■□□□□ 0.24
PCCA-206ENST00000428969 LINS1Q8NG48 757 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms