RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 AGXT2Q9BYV1 514 aa22.78■■□□□ 1.24
SNX17-202ENST00000427123 TRMT112Q9UI30 125 aaKnown RBP22.78■■□□□ 1.24
SNX17-202ENST00000427123 ARAP2Q8WZ64 1704 aa22.78■■□□□ 1.24
SNX17-202ENST00000427123 RREB1Q92766 1687 aa22.77■■□□□ 1.24
SNX17-202ENST00000427123 CICQ96RK0 1608 aaPredicted RBP22.77■■□□□ 1.24
SNX17-202ENST00000427123 E7EWF7 191 aa22.77■■□□□ 1.24
SNX17-202ENST00000427123 EXOSC10Q01780 885 aaKnown RBP22.77■■□□□ 1.24
SNX17-202ENST00000427123 FAM184AQ8NB25 1140 aa22.77■■□□□ 1.24
SNX17-202ENST00000427123 AKAP11Q9UKA4 1901 aa22.77■■□□□ 1.24
SNX17-202ENST00000427123 PDE8AO60658 829 aa22.77■■□□□ 1.24
SNX17-202ENST00000427123 FERMT3Q86UX7 667 aa22.77■■□□□ 1.24
SNX17-202ENST00000427123 CTNNA3Q9UI47 895 aa22.77■■□□□ 1.24
SNX17-202ENST00000427123 JAK2O60674 1132 aa22.76■■□□□ 1.23
SNX17-202ENST00000427123 SCARF1Q14162 830 aa22.76■■□□□ 1.23
SNX17-202ENST00000427123 RNF214Q8ND24 703 aa22.76■■□□□ 1.23
SNX17-202ENST00000427123 APPBP2Q92624 585 aa22.76■■□□□ 1.23
SNX17-202ENST00000427123 ZNF512BQ96KM6 892 aaPredicted RBP22.76■■□□□ 1.23
SNX17-202ENST00000427123 CNNM1Q9NRU3 951 aa22.76■■□□□ 1.23
SNX17-202ENST00000427123 ZAP70P43403 619 aa22.75■■□□□ 1.23
SNX17-202ENST00000427123 SCRN1Q12765 414 aa22.75■■□□□ 1.23
SNX17-202ENST00000427123 ZSCAN30Q86W11 494 aa22.75■■□□□ 1.23
SNX17-202ENST00000427123 SMARCC2Q8TAQ2 1214 aa22.75■■□□□ 1.23
SNX17-202ENST00000427123 LRRC2Q9BYS8 371 aa22.75■■□□□ 1.23
SNX17-202ENST00000427123 THRAP3Q9Y2W1 955 aaKnown RBP22.75■■□□□ 1.23
SNX17-202ENST00000427123 WASHC4Q2M389 1173 aa22.75■■□□□ 1.23
SNX17-202ENST00000427123 ZNF34Q8IZ26 560 aa22.75■■□□□ 1.23
SNX17-202ENST00000427123 SCAND2PQ9GZW5 306 aaPredicted RBP22.75■■□□□ 1.23
SNX17-202ENST00000427123 PHLPP1O60346 1717 aa22.75■■□□□ 1.23
SNX17-202ENST00000427123 SPATA31A1Q5TZJ5 1347 aa22.74■■□□□ 1.23
SNX17-202ENST00000427123 UBN2Q6ZU65 1347 aa22.74■■□□□ 1.23
SNX17-202ENST00000427123 TTC6Q86TZ1 520 aa22.74■■□□□ 1.23
SNX17-202ENST00000427123 VGLL2Q8N8G2 317 aa22.74■■□□□ 1.23
SNX17-202ENST00000427123 AK7Q96M32 723 aa22.74■■□□□ 1.23
SNX17-202ENST00000427123 MYH15Q9Y2K3 1946 aa22.74■■□□□ 1.23
SNX17-202ENST00000427123 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.74■■□□□ 1.238e-8■■■■□ 25
SNX17-202ENST00000427123 TBC1D2BQ9UPU7 963 aa22.74■■□□□ 1.23
SNX17-202ENST00000427123 UVSSAQ2YD98 709 aa22.73■■□□□ 1.23
SNX17-202ENST00000427123 ATRNO75882 1429 aa22.73■■□□□ 1.23
SNX17-202ENST00000427123 SLIT2O94813 1529 aa22.73■■□□□ 1.23
SNX17-202ENST00000427123 DDX60Q8IY21 1712 aaKnown RBP22.72■■□□□ 1.23
SNX17-202ENST00000427123 A0A0G2JLW4 131 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 HMGN5P82970 282 aaKnown RBP22.72■■□□□ 1.23
SNX17-202ENST00000427123 CHMP4CQ96CF2 233 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 FOXP2O15409 715 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 MCAMP43121 646 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 APOBRQ0VD83 1088 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 DDB1Q16531 1140 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 IMMTQ16891 758 aaKnown RBP22.72■■□□□ 1.23
SNX17-202ENST00000427123 TPRNQ4KMQ1 711 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 ZSCAN25Q6NSZ9 544 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 FBXL16Q8N461 479 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 KIF3AQ9Y496 699 aa22.72■■□□□ 1.23
SNX17-202ENST00000427123 H3BQV1 296 aa22.71■■□□□ 1.23
SNX17-202ENST00000427123 EIF5P55010 431 aaKnown RBP22.71■■□□□ 1.23
SNX17-202ENST00000427123 RESTQ13127 1097 aa22.71■■□□□ 1.23
SNX17-202ENST00000427123 TTF1Q15361 905 aaPredicted RBP22.71■■□□□ 1.23
SNX17-202ENST00000427123 IFFO2Q5TF58 517 aa22.71■■□□□ 1.23
SNX17-202ENST00000427123 TTLL5Q6EMB2 1281 aa22.71■■□□□ 1.23
SNX17-202ENST00000427123 NSUN7Q8NE18 718 aaKnown RBP22.71■■□□□ 1.23
SNX17-202ENST00000427123 LAMB2P55268 1798 aa22.71■■□□□ 1.23
SNX17-202ENST00000427123 PDE8BO95263 885 aa22.7■■□□□ 1.23
SNX17-202ENST00000427123 FAM173BQ6P4H8 233 aa22.7■■□□□ 1.23
SNX17-202ENST00000427123 PI16Q6UXB8 463 aa22.7■■□□□ 1.23
SNX17-202ENST00000427123 ZNF274Q96GC6 653 aaPredicted RBP22.7■■□□□ 1.23
SNX17-202ENST00000427123 ZSCAN16Q9H4T2 348 aaPredicted RBP22.7■■□□□ 1.23
SNX17-202ENST00000427123 CCDC87Q9NVE4 849 aa22.7■■□□□ 1.23
SNX17-202ENST00000427123 DDX11Q96FC9 970 aa22.7■■□□□ 1.22
SNX17-202ENST00000427123 SPATA32Q96LK8 384 aa22.7■■□□□ 1.22
SNX17-202ENST00000427123 MROH5Q6ZUA9 1318 aa22.7■■□□□ 1.22
SNX17-202ENST00000427123 NAA16Q6N069 864 aaPredicted RBP22.69■■□□□ 1.22
SNX17-202ENST00000427123 INTS5Q6P9B9 1019 aaKnown RBP22.69■■□□□ 1.22
SNX17-202ENST00000427123 FUCA2Q9BTY2 467 aa22.69■■□□□ 1.22
SNX17-202ENST00000427123 PTPDC1A2A3K4 754 aa22.69■■□□□ 1.22
SNX17-202ENST00000427123 LEO1Q8WVC0 666 aaPredicted RBP22.69■■□□□ 1.22
SNX17-202ENST00000427123 PUS7LQ9H0K6 701 aaKnown RBP22.69■■□□□ 1.22
SNX17-202ENST00000427123 GPAA1O43292 621 aa22.68■■□□□ 1.22
SNX17-202ENST00000427123 CTDNEP1O95476 244 aa22.68■■□□□ 1.22
SNX17-202ENST00000427123 UQCRFS1P1P0C7P4 283 aa22.68■■□□□ 1.22
SNX17-202ENST00000427123 MSNP26038 577 aaKnown RBP22.68■■□□□ 1.22
SNX17-202ENST00000427123 ADD2P35612 726 aa22.68■■□□□ 1.22
SNX17-202ENST00000427123 EVCP57679 992 aa22.68■■□□□ 1.22
SNX17-202ENST00000427123 PUM3Q15397 648 aaKnown RBP22.68■■□□□ 1.22
SNX17-202ENST00000427123 SALL1Q9NSC2 1324 aa22.68■■□□□ 1.22
SNX17-202ENST00000427123 LTBP4Q8N2S1 1624 aa22.68■■□□□ 1.22
SNX17-202ENST00000427123 ADAMTS2O95450 1211 aa22.67■■□□□ 1.22
SNX17-202ENST00000427123 FGAP02671 866 aa22.67■■□□□ 1.22
SNX17-202ENST00000427123 ARID4AP29374 1257 aaPredicted RBP22.67■■□□□ 1.22
SNX17-202ENST00000427123 CCDC39Q9UFE4 941 aa22.67■■□□□ 1.22
SNX17-202ENST00000427123 PDIA3P30101 505 aaKnown RBP22.67■■□□□ 1.22
SNX17-202ENST00000427123 CRKLP46109 303 aaKnown RBP22.67■■□□□ 1.22
SNX17-202ENST00000427123 NOL7Q9UMY1 257 aaKnown RBP22.67■■□□□ 1.22
SNX17-202ENST00000427123 MYO5AQ9Y4I1 1855 aaKnown RBP22.66■■□□□ 1.22
SNX17-202ENST00000427123 ATP6V1AP38606 617 aa22.66■■□□□ 1.22
SNX17-202ENST00000427123 GIMAP6Q6P9H5 292 aa22.66■■□□□ 1.22
SNX17-202ENST00000427123 LPIN2Q92539 896 aa22.66■■□□□ 1.22
SNX17-202ENST00000427123 WDR19Q8NEZ3 1342 aa22.66■■□□□ 1.22
SNX17-202ENST00000427123 GOLGA6L4A6NEF3 574 aa22.65■■□□□ 1.22
SNX17-202ENST00000427123 HCLS1P14317 486 aaPredicted RBP22.65■■□□□ 1.22
SNX17-202ENST00000427123 UBE3CQ15386 1083 aa22.65■■□□□ 1.22
SNX17-202ENST00000427123 SUSD4Q5VX71 490 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms