RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 VEGFAP15692 232 aaPredicted RBP13.4□□□□□ -0.26
SYNC-204ENST00000426909 GPSM2P81274 684 aa13.4□□□□□ -0.26
SYNC-204ENST00000426909 FOXO4P98177 505 aa13.4□□□□□ -0.26
SYNC-204ENST00000426909 KIAA2012Q0VF49 1180 aa13.4□□□□□ -0.26
SYNC-204ENST00000426909 IFIT5Q13325 482 aaKnown RBP13.4□□□□□ -0.26
SYNC-204ENST00000426909 WASHC4Q2M389 1173 aa13.4□□□□□ -0.26
SYNC-204ENST00000426909 MPHOSPH8Q99549 860 aa13.4□□□□□ -0.26
SYNC-204ENST00000426909 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
SYNC-204ENST00000426909 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
SYNC-204ENST00000426909 XDHP47989 1333 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 WDR90Q96KV7 1748 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 IQCA1LA6NCM1 817 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 EPB41L2O43491 1005 aaKnown RBP13.39□□□□□ -0.27
SYNC-204ENST00000426909 TOMM70O94826 608 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 DDNO94850 711 aaPredicted RBP13.39□□□□□ -0.27
SYNC-204ENST00000426909 CCDC57Q2TAC2 916 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 GPC2Q8N158 579 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 CHMP3Q9Y3E7 222 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 DUOX1Q9NRD9 1551 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 TTC41PQ6P2S7 1318 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
SYNC-204ENST00000426909 ERC2O15083 957 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 UFL1O94874 794 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 LMBR1LQ6UX01 489 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 CLASRPQ8N2M8 674 aaKnown RBP13.38□□□□□ -0.27
SYNC-204ENST00000426909 TBC1D16Q8TBP0 767 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 GPATCH3Q96I76 525 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
SYNC-204ENST00000426909 POLLQ9UGP5 575 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 GGA1Q9UJY5 639 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 ZNRF3Q9ULT6 936 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 LTBP1Q14766 1721 aa13.38□□□□□ -0.27
SYNC-204ENST00000426909 COL4A5P29400 1685 aa13.37□□□□□ -0.27
SYNC-204ENST00000426909 SLC4A3P48751 1232 aa13.37□□□□□ -0.27
SYNC-204ENST00000426909 OS9Q13438 667 aaPredicted RBP13.37□□□□□ -0.27
SYNC-204ENST00000426909 TAF7LQ5H9L4 462 aa13.37□□□□□ -0.27
SYNC-204ENST00000426909 SUCLG2Q96I99 432 aa13.37□□□□□ -0.27
SYNC-204ENST00000426909 ZC3H12CQ9C0D7 883 aaKnown RBP13.37□□□□□ -0.27
SYNC-204ENST00000426909 ANKRD2Q9GZV1 360 aa13.37□□□□□ -0.27
SYNC-204ENST00000426909 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
SYNC-204ENST00000426909 ATP2B4P23634 1241 aa13.36□□□□□ -0.27
SYNC-204ENST00000426909 EPHA10Q5JZY3 1008 aa13.36□□□□□ -0.27
SYNC-204ENST00000426909 RBM46Q8TBY0 533 aaKnown RBP13.36□□□□□ -0.27
SYNC-204ENST00000426909 BICC1Q9H694 974 aaKnown RBP13.36□□□□□ -0.27
SYNC-204ENST00000426909 MINPP1Q9UNW1 487 aa13.36□□□□□ -0.27
SYNC-204ENST00000426909 GJA3Q9Y6H8 435 aa13.36□□□□□ -0.27
SYNC-204ENST00000426909 G3V3G9 751 aa13.35□□□□□ -0.27
SYNC-204ENST00000426909 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
SYNC-204ENST00000426909 G3BP1Q13283 466 aaKnown RBP eCLIP13.35□□□□□ -0.27
SYNC-204ENST00000426909 TNIP1Q15025 636 aa13.35□□□□□ -0.27
SYNC-204ENST00000426909 RABEP1Q15276 862 aa13.35□□□□□ -0.27
SYNC-204ENST00000426909 RABL6Q3YEC7 729 aaPredicted RBP13.35□□□□□ -0.27
SYNC-204ENST00000426909 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
SYNC-204ENST00000426909 KAZALD1Q96I82 304 aa13.35□□□□□ -0.27
SYNC-204ENST00000426909 USP26Q9BXU7 913 aa13.35□□□□□ -0.27
SYNC-204ENST00000426909 HACL1Q9UJ83 578 aa13.35□□□□□ -0.27
SYNC-204ENST00000426909 SPEF2Q9C093 1822 aa13.34□□□□□ -0.27
SYNC-204ENST00000426909 POTECB2RU33 542 aa13.34□□□□□ -0.27
SYNC-204ENST00000426909 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
SYNC-204ENST00000426909 CIAPIN1Q6FI81 312 aa13.34□□□□□ -0.27
SYNC-204ENST00000426909 LDHAL6AQ6ZMR3 332 aa13.34□□□□□ -0.27
SYNC-204ENST00000426909 IL1RAPL2Q9NP60 686 aa13.34□□□□□ -0.27
SYNC-204ENST00000426909 COPRSQ9NQ92 184 aa13.34□□□□□ -0.27
SYNC-204ENST00000426909 LEMD3Q9Y2U8 911 aa13.34□□□□□ -0.27
SYNC-204ENST00000426909 SCN4AP35499 1836 aa13.34□□□□□ -0.27
SYNC-204ENST00000426909 MED23Q9ULK4 1368 aa13.33□□□□□ -0.27
SYNC-204ENST00000426909 ECE2O60344 883 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 KCNJ4P48050 445 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 CXCL9Q07325 125 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 FSTL1Q12841 308 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 PNMA8AQ86V59 439 aaPredicted RBP13.33□□□□□ -0.28
SYNC-204ENST00000426909 CNTROBQ8N137 903 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 SMC1BQ8NDV3 1235 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 PI4K2BQ8TCG2 481 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 GPR101Q96P66 508 aaPredicted RBP13.33□□□□□ -0.28
SYNC-204ENST00000426909 KIF2CQ99661 725 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 DBNDD1Q9H9R9 158 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 CNNM1Q9NRU3 951 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 ECHDC1Q9NTX5 307 aa13.33□□□□□ -0.28
SYNC-204ENST00000426909 TRIM6-TRIM34B2RNG4 842 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 RAD17O75943 681 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 IFIT2P09913 472 aaKnown RBP13.32□□□□□ -0.28
SYNC-204ENST00000426909 MCCP23508 829 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 CHMLP26374 656 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 EPHX2P34913 555 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 CHRNDQ07001 517 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 ZNF594Q96JF6 807 aaPredicted RBP13.32□□□□□ -0.28
SYNC-204ENST00000426909 ESYT1Q9BSJ8 1104 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 TAF1DQ9H5J8 278 aaPredicted RBP13.32□□□□□ -0.28
SYNC-204ENST00000426909 ANTXR1Q9H6X2 564 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 ZNF804BA4D1E1 1349 aa13.32□□□□□ -0.28
SYNC-204ENST00000426909 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
SYNC-204ENST00000426909 YDJCA8MPS7 323 aa13.31□□□□□ -0.28
SYNC-204ENST00000426909 PODNQ7Z5L7 613 aa13.31□□□□□ -0.28
SYNC-204ENST00000426909 RILPL2Q969X0 211 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms