RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 VPS37CA5D8V6 355 aaPredicted RBP18.66■□□□□ 0.58
PKP4-205ENST00000426248 FOSBP53539 338 aa18.66■□□□□ 0.58
PKP4-205ENST00000426248 SKIDA1Q1XH10 827 aa18.66■□□□□ 0.58
PKP4-205ENST00000426248 CCDC152Q4G0S7 254 aa18.66■□□□□ 0.58
PKP4-205ENST00000426248 FBXW7Q969H0 707 aa18.66■□□□□ 0.58
PKP4-205ENST00000426248 CCDC192P0DO97 292 aa18.66■□□□□ 0.58
PKP4-205ENST00000426248 EYA2O00167 538 aa18.66■□□□□ 0.58
PKP4-205ENST00000426248 GNL2Q13823 731 aaKnown RBP18.66■□□□□ 0.58
PKP4-205ENST00000426248 LRRC24Q50LG9 513 aa18.66■□□□□ 0.58
PKP4-205ENST00000426248 ZBTB38Q8NAP3 1195 aaPredicted RBP18.66■□□□□ 0.58
PKP4-205ENST00000426248 SRP68Q9UHB9 627 aaKnown RBP18.66■□□□□ 0.58
PKP4-205ENST00000426248 ITPK1Q13572 414 aa18.65■□□□□ 0.58
PKP4-205ENST00000426248 NLRP10Q86W26 655 aa18.65■□□□□ 0.58
PKP4-205ENST00000426248 PUS3Q9BZE2 481 aaKnown RBP18.65■□□□□ 0.58
PKP4-205ENST00000426248 PTPN14Q15678 1187 aa18.65■□□□□ 0.58
PKP4-205ENST00000426248 PTF1AQ7RTS3 328 aa18.65■□□□□ 0.58
PKP4-205ENST00000426248 NLRP3Q96P20 1036 aa18.65■□□□□ 0.58
PKP4-205ENST00000426248 PPP1R1BQ9UD71 204 aaPredicted RBP18.65■□□□□ 0.58
PKP4-205ENST00000426248 LRRFIP1Q32MZ4 808 aaKnown RBP18.65■□□□□ 0.58
PKP4-205ENST00000426248 FILIP1Q7Z7B0 1213 aa18.65■□□□□ 0.58
PKP4-205ENST00000426248 TPTE2Q6XPS3 522 aa18.64■□□□□ 0.58
PKP4-205ENST00000426248 ABCF2Q9UG63 623 aa18.64■□□□□ 0.58
PKP4-205ENST00000426248 WDR33Q9C0J8 1336 aaKnown RBP18.64■□□□□ 0.57
PKP4-205ENST00000426248 RXRBP28702 533 aa18.64■□□□□ 0.57
PKP4-205ENST00000426248 EDC3Q96F86 508 aaKnown RBP18.64■□□□□ 0.57
PKP4-205ENST00000426248 USP26Q9BXU7 913 aa18.64■□□□□ 0.57
PKP4-205ENST00000426248 RGPD2P0DJD1 1756 aa18.64■□□□□ 0.57
PKP4-205ENST00000426248 ZNF772Q68DY9 489 aaPredicted RBP18.64■□□□□ 0.57
PKP4-205ENST00000426248 CKAP2LQ8IYA6 745 aa18.64■□□□□ 0.57
PKP4-205ENST00000426248 PDE8AO60658 829 aa18.64■□□□□ 0.57
PKP4-205ENST00000426248 ZRSR1Q15695 479 aaKnown RBP18.64■□□□□ 0.57
PKP4-205ENST00000426248 KRBA2Q6ZNG9 492 aa18.64■□□□□ 0.57
PKP4-205ENST00000426248 GREM2Q9H772 168 aa18.64■□□□□ 0.57
PKP4-205ENST00000426248 ZNF215Q9UL58 517 aaPredicted RBP18.64■□□□□ 0.57
PKP4-205ENST00000426248 TNNI3KQ59H18 835 aa18.63■□□□□ 0.57
PKP4-205ENST00000426248 SPTLC3Q9NUV7 552 aa18.63■□□□□ 0.57
PKP4-205ENST00000426248 PAXBP1Q9Y5B6 917 aa18.63■□□□□ 0.57
PKP4-205ENST00000426248 FPGT-TNNI3KV9GXZ4 949 aa18.63■□□□□ 0.57
PKP4-205ENST00000426248 GOLGA6L19H0YKK7 550 aa18.63■□□□□ 0.57
PKP4-205ENST00000426248 PCCAP05165 728 aaPredicted RBP18.63■□□□□ 0.57
PKP4-205ENST00000426248 CDC5LQ99459 802 aaKnown RBP18.63■□□□□ 0.57
PKP4-205ENST00000426248 TEX2Q8IWB9 1127 aa18.63■□□□□ 0.57
PKP4-205ENST00000426248 A0A1B0GUL7 405 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 CAPN2P17655 700 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 PARP10Q53GL7 1025 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 HOMER1Q86YM7 354 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 EVI5LQ96CN4 794 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 TLR7Q9NYK1 1049 aaKnown RBP18.62■□□□□ 0.57
PKP4-205ENST00000426248 TAF5LO75529 589 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 CCAR2Q8N163 923 aaKnown RBP18.62■□□□□ 0.57
PKP4-205ENST00000426248 RGS22Q8NE09 1264 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 CWC15Q9P013 229 aaKnown RBP18.62■□□□□ 0.57
PKP4-205ENST00000426248 RGS12O14924 1447 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 HIP1O00291 1037 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 SLC4A9Q96Q91 983 aa18.62■□□□□ 0.57
PKP4-205ENST00000426248 RGPD5Q99666 1765 aa18.61■□□□□ 0.57
PKP4-205ENST00000426248 H7C1W4 665 aa18.61■□□□□ 0.57
PKP4-205ENST00000426248 POLA2Q14181 598 aa18.61■□□□□ 0.57
PKP4-205ENST00000426248 BMS1Q14692 1282 aaKnown RBP18.61■□□□□ 0.57
PKP4-205ENST00000426248 FNBP4Q8N3X1 1017 aaPredicted RBP18.61■□□□□ 0.57
PKP4-205ENST00000426248 ANKIB1Q9P2G1 1089 aa18.61■□□□□ 0.57
PKP4-205ENST00000426248 ZNF219Q9P2Y4 722 aaPredicted RBP18.61■□□□□ 0.57
PKP4-205ENST00000426248 LOC102724159A0A0B4J2E5 919 aa18.61■□□□□ 0.57
PKP4-205ENST00000426248 RAD51AP2Q09MP3 1159 aa18.61■□□□□ 0.57
PKP4-205ENST00000426248 PWP2Q15269 919 aaKnown RBP18.61■□□□□ 0.57
PKP4-205ENST00000426248 RNF20Q5VTR2 975 aa18.61■□□□□ 0.57
PKP4-205ENST00000426248 ANKRD18AQ8IVF6 992 aa18.61■□□□□ 0.57
PKP4-205ENST00000426248 PTPN12Q05209 780 aaKnown RBP18.61■□□□□ 0.57
PKP4-205ENST00000426248 LUZP1Q86V48 1076 aa18.61■□□□□ 0.57
PKP4-205ENST00000426248 SASH1O94885 1247 aa18.6■□□□□ 0.57
PKP4-205ENST00000426248 SUSD4Q5VX71 490 aa18.6■□□□□ 0.57
PKP4-205ENST00000426248 STK11IPQ8N1F8 1099 aa18.6■□□□□ 0.57
PKP4-205ENST00000426248 CTSWP56202 376 aa18.6■□□□□ 0.57
PKP4-205ENST00000426248 RPGRQ92834 1020 aaKnown RBP18.6■□□□□ 0.57
PKP4-205ENST00000426248 ARGLU1Q9NWB6 273 aaPredicted RBP18.6■□□□□ 0.57
PKP4-205ENST00000426248 CYP2E1P05181 493 aaPredicted RBP18.59■□□□□ 0.57
PKP4-205ENST00000426248 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 KCNF1Q9H3M0 494 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 CLIP2Q9UDT6 1046 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 SMC3Q9UQE7 1217 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 ATP6V1DQ9Y5K8 247 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 ATP10DQ9P241 1426 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.59■□□□□ 0.57
PKP4-205ENST00000426248 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
PKP4-205ENST00000426248 TRPM3Q9HCF6 1732 aaPredicted RBP18.59■□□□□ 0.57
PKP4-205ENST00000426248 CHMLP26374 656 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 TPM4P67936 248 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 COPRSQ9NQ92 184 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 LRP2BPQ9P2M1 347 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 SLC5A1P13866 664 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 MNS1Q8NEH6 495 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 DRC1Q96MC2 740 aa18.59■□□□□ 0.57
PKP4-205ENST00000426248 TTC41PQ6P2S7 1318 aa18.58■□□□□ 0.57
PKP4-205ENST00000426248 KMT5BQ4FZB7 885 aa18.58■□□□□ 0.57
PKP4-205ENST00000426248 NRBP1Q9UHY1 535 aa18.58■□□□□ 0.57
PKP4-205ENST00000426248 FEZ2Q9UHY8 353 aaPredicted RBP18.58■□□□□ 0.57
PKP4-205ENST00000426248 BECN2A8MW95 431 aa18.58■□□□□ 0.56
PKP4-205ENST00000426248 PATL2C9JE40 543 aaKnown RBP18.58■□□□□ 0.56
PKP4-205ENST00000426248 SEC31BQ9NQW1 1179 aa18.58■□□□□ 0.56
PKP4-205ENST00000426248 WWC3Q9ULE0 1092 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms