RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RPLP1P05386 114 aaKnown RBP5.35□□□□□ -1.55
SF3B1-205ENST00000424674 SETDB1Q15047 1291 aa5.35□□□□□ -1.55
SF3B1-205ENST00000424674 FOXD4L6Q3SYB3 417 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-205ENST00000424674 CEP135Q66GS9 1140 aa5.35□□□□□ -1.55
SF3B1-205ENST00000424674 FOXD4L3Q6VB84 417 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-205ENST00000424674 ZNF438Q7Z4V0 828 aa5.35□□□□□ -1.55
SF3B1-205ENST00000424674 EDEM1Q92611 657 aa5.35□□□□□ -1.55
SF3B1-205ENST00000424674 AKTIPQ9H8T0 292 aa5.35□□□□□ -1.55
SF3B1-205ENST00000424674 PPME1Q9Y570 386 aa5.35□□□□□ -1.55
SF3B1-205ENST00000424674 ARID4BQ4LE39 1312 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-205ENST00000424674 RBM47A0AV96 593 aaKnown RBP5.34□□□□□ -1.55
SF3B1-205ENST00000424674 CYP2E1P05181 493 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-205ENST00000424674 PCSK2P16519 638 aa5.34□□□□□ -1.55
SF3B1-205ENST00000424674 MPSTP25325 297 aa5.34□□□□□ -1.55
SF3B1-205ENST00000424674 NCAPG2Q86XI2 1143 aa5.34□□□□□ -1.55
SF3B1-205ENST00000424674 LACRTQ9GZZ8 138 aa5.34□□□□□ -1.55
SF3B1-205ENST00000424674 RASSF4Q9H2L5 321 aa5.34□□□□□ -1.55
SF3B1-205ENST00000424674 ELP3Q9H9T3 547 aa5.34□□□□□ -1.55
SF3B1-205ENST00000424674 CWC22Q9HCG8 908 aaKnown RBP5.34□□□□□ -1.55
SF3B1-205ENST00000424674 TMEM63CQ9P1W3 806 aa5.34□□□□□ -1.55
SF3B1-205ENST00000424674 UNCXA6NJT0 531 aa5.33□□□□□ -1.56
SF3B1-205ENST00000424674 F8W735 103 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-205ENST00000424674 PDGFAP04085 211 aa5.33□□□□□ -1.56
SF3B1-205ENST00000424674 CDC27P30260 824 aa5.33□□□□□ -1.56
SF3B1-205ENST00000424674 DNM1Q05193 864 aaKnown RBP5.33□□□□□ -1.56
SF3B1-205ENST00000424674 NOM1Q5C9Z4 860 aaKnown RBP5.33□□□□□ -1.56
SF3B1-205ENST00000424674 TAF7LQ5H9L4 462 aa5.33□□□□□ -1.56
SF3B1-205ENST00000424674 ANKRD13AQ8IZ07 590 aa5.33□□□□□ -1.56
SF3B1-205ENST00000424674 TMEM130Q8N3G9 435 aa5.33□□□□□ -1.56
SF3B1-205ENST00000424674 GTF3C2Q8WUA4 911 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-205ENST00000424674 SPATA32Q96LK8 384 aa5.33□□□□□ -1.56
SF3B1-205ENST00000424674 BCCIPQ9P287 314 aaKnown RBP eCLIP5.33□□□□□ -1.56
SF3B1-205ENST00000424674 KANSL3Q9P2N6 904 aa5.33□□□□□ -1.56
SF3B1-205ENST00000424674 IVNS1ABPQ9Y6Y0 642 aa5.33□□□□□ -1.56
SF3B1-205ENST00000424674 LINC01387J3KSC0 135 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 ALX3O95076 343 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 PTPRAP18433 802 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 SSFA2P28290 1259 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 MZF1P28698 734 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-205ENST00000424674 EIF1AXP47813 144 aaKnown RBP5.32□□□□□ -1.56
SF3B1-205ENST00000424674 MTMR3Q13615 1198 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 ALKBH2Q6NS38 261 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 TXNDC11Q6PKC3 985 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 DZIP1LQ8IYY4 767 aaKnown RBP5.32□□□□□ -1.56
SF3B1-205ENST00000424674 CEP120Q8N960 986 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 TTC16Q8NEE8 873 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 DRC1Q96MC2 740 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 PSMD1Q99460 953 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 PBX4Q9BYU1 374 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 ANO2Q9NQ90 1003 aa5.32□□□□□ -1.56
SF3B1-205ENST00000424674 FAM177BA6PVY3 158 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 EPHA1P21709 976 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 C8orf34Q49A92 452 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 PHLDB3Q6NSJ2 640 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 FAM117BQ6P1L5 589 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 XKR5Q6UX68 686 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 ADAMTSL4Q6UY14 1074 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 PRR23CQ6ZRP0 262 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 Q6ZS46 218 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.31□□□□□ -1.56
SF3B1-205ENST00000424674 AGGF1Q8N302 714 aaeCLIP5.31□□□□□ -1.56
SF3B1-205ENST00000424674 GALNT11Q8NCW6 608 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 CNTN3Q9P232 1028 aa5.31□□□□□ -1.56
SF3B1-205ENST00000424674 A6NHS1 94 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 GLB1P16278 677 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 ERCC3P19447 782 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 CES1P23141 567 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 CDC25BP30305 580 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 CD68P34810 354 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-205ENST00000424674 ARTNQ5T4W7 220 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 C1orf127Q8N9H9 656 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 SREK1Q8WXA9 508 aaKnown RBP5.3□□□□□ -1.56
SF3B1-205ENST00000424674 C8orf37Q96NL8 207 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 CARD10Q9BWT7 1032 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 ADAM19Q9H013 955 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 GGNBP2Q9H3C7 697 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 ZFP64Q9NPA5 681 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 SALL4Q9UJQ4 1053 aa5.3□□□□□ -1.56
SF3B1-205ENST00000424674 H3BRJ5 948 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 FSCN2O14926 492 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 WISP1O95388 367 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 ACPPP15309 386 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 CABP4P57796 275 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 AAMPQ13685 434 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 LRP8Q14114 963 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 ACAD11Q709F0 780 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 KLHL23Q8NBE8 558 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 POP1Q99575 1024 aaKnown RBP5.29□□□□□ -1.56
SF3B1-205ENST00000424674 CHRDQ9H2X0 955 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 SH2B1Q9NRF2 756 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-205ENST00000424674 POLIQ9UNA4 740 aa5.29□□□□□ -1.56
SF3B1-205ENST00000424674 TM4SF5O14894 197 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 SMARCA5O60264 1052 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-205ENST00000424674 FAM13AO94988 1023 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 ABL1P00519 1130 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 NPR3P17342 541 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 USP5P45974 858 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 SF3B2Q13435 895 aaKnown RBP5.28□□□□□ -1.56
SF3B1-205ENST00000424674 CERS3Q8IU89 383 aa5.28□□□□□ -1.56
SF3B1-205ENST00000424674 SNX29Q8TEQ0 813 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms