RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 OS9Q13438 667 aaPredicted RBP19.55■□□□□ 0.72
BRAT1-202ENST00000421712 ATG9AQ7Z3C6 839 aa19.55■□□□□ 0.72
BRAT1-202ENST00000421712 COA1Q9GZY4 146 aa19.55■□□□□ 0.72
BRAT1-202ENST00000421712 CEP85Q6P2H3 762 aa19.54■□□□□ 0.72
BRAT1-202ENST00000421712 ZNF804AQ7Z570 1209 aa19.54■□□□□ 0.72
BRAT1-202ENST00000421712 PODNQ7Z5L7 613 aa19.54■□□□□ 0.72
BRAT1-202ENST00000421712 KCNQ5Q9NR82 932 aa19.54■□□□□ 0.72
BRAT1-202ENST00000421712 SUPT16HQ9Y5B9 1047 aaKnown RBP19.54■□□□□ 0.72
BRAT1-202ENST00000421712 PSMD14O00487 310 aa19.53■□□□□ 0.72
BRAT1-202ENST00000421712 SURF6O75683 361 aaKnown RBP19.53■□□□□ 0.72
BRAT1-202ENST00000421712 IFIT1P09914 478 aaKnown RBP19.53■□□□□ 0.72
BRAT1-202ENST00000421712 LMOD1P29536 600 aaPredicted RBP19.53■□□□□ 0.72
BRAT1-202ENST00000421712 POLA2Q14181 598 aa19.53■□□□□ 0.72
BRAT1-202ENST00000421712 PUM3Q15397 648 aaKnown RBP19.53■□□□□ 0.72
BRAT1-202ENST00000421712 VPS37DQ86XT2 251 aa19.53■□□□□ 0.72
BRAT1-202ENST00000421712 SSH3Q8TE77 659 aa19.53■□□□□ 0.72
BRAT1-202ENST00000421712 IQCA1LA6NCM1 817 aa19.52■□□□□ 0.72
BRAT1-202ENST00000421712 SLC5A1P13866 664 aa19.52■□□□□ 0.72
BRAT1-202ENST00000421712 CAVIN4Q5BKX8 364 aa19.52■□□□□ 0.72
BRAT1-202ENST00000421712 C15orf52Q6ZUT6 534 aaKnown RBP19.52■□□□□ 0.72
BRAT1-202ENST00000421712 VGLL2Q8N8G2 317 aa19.52■□□□□ 0.72
BRAT1-202ENST00000421712 CD209Q9NNX6 404 aa19.52■□□□□ 0.72
BRAT1-202ENST00000421712 USP17L3A6NCW0 530 aa19.51■□□□□ 0.71
BRAT1-202ENST00000421712 USP17L4A6NCW7 530 aa19.51■□□□□ 0.71
BRAT1-202ENST00000421712 HMMRO75330 724 aa19.51■□□□□ 0.71
BRAT1-202ENST00000421712 HIBADHP31937 336 aaKnown RBP19.51■□□□□ 0.71
BRAT1-202ENST00000421712 GYG1P46976 350 aa19.51■□□□□ 0.71
BRAT1-202ENST00000421712 USP17L1Q7RTZ2 530 aa19.51■□□□□ 0.71
BRAT1-202ENST00000421712 RPAP2Q8IXW5 612 aaPredicted RBP19.51■□□□□ 0.71
BRAT1-202ENST00000421712 L3MBTL3Q96JM7 780 aaPredicted RBP19.51■□□□□ 0.71
BRAT1-202ENST00000421712 CRBNQ96SW2 442 aa19.51■□□□□ 0.71
BRAT1-202ENST00000421712 HACL1Q9UJ83 578 aa19.51■□□□□ 0.71
BRAT1-202ENST00000421712 A0A1B0GUL6 1792 aa19.5■□□□□ 0.71
BRAT1-202ENST00000421712 KIF3CO14782 793 aa19.5■□□□□ 0.71
BRAT1-202ENST00000421712 GMPSP49915 693 aaPredicted RBP19.5■□□□□ 0.71
BRAT1-202ENST00000421712 TFCP2Q12800 502 aa19.5■□□□□ 0.71
BRAT1-202ENST00000421712 ATP2B3Q16720 1220 aa19.5■□□□□ 0.71
BRAT1-202ENST00000421712 LPIN2Q92539 896 aa19.5■□□□□ 0.71
BRAT1-202ENST00000421712 ZBTB12Q9Y330 459 aaPredicted RBP19.5■□□□□ 0.71
BRAT1-202ENST00000421712 POTECB2RU33 542 aa19.49■□□□□ 0.71
BRAT1-202ENST00000421712 FRAT2O75474 233 aaPredicted RBP19.49■□□□□ 0.71
BRAT1-202ENST00000421712 TTLL5Q6EMB2 1281 aa19.49■□□□□ 0.71
BRAT1-202ENST00000421712 AKAP2Q9Y2D5 859 aa19.49■□□□□ 0.71
BRAT1-202ENST00000421712 VIL1P09327 827 aaKnown RBP19.48■□□□□ 0.71
BRAT1-202ENST00000421712 FGFR2P21802 821 aa19.48■□□□□ 0.71
BRAT1-202ENST00000421712 GTF2IP78347 998 aa19.48■□□□□ 0.71
BRAT1-202ENST00000421712 EAPPQ56P03 285 aaPredicted RBP19.48■□□□□ 0.71
BRAT1-202ENST00000421712 FAM84BQ96KN1 310 aaPredicted RBP19.48■□□□□ 0.71
BRAT1-202ENST00000421712 IRS2Q9Y4H2 1338 aa19.48■□□□□ 0.71
BRAT1-202ENST00000421712 WDR90Q96KV7 1748 aa19.48■□□□□ 0.71
BRAT1-202ENST00000421712 H7C1D1 291 aa19.47■□□□□ 0.71
BRAT1-202ENST00000421712 EPHX2P34913 555 aa19.47■□□□□ 0.71
BRAT1-202ENST00000421712 EPS15P42566 896 aa19.47■□□□□ 0.71
BRAT1-202ENST00000421712 BCAMP50895 628 aa19.47■□□□□ 0.71
BRAT1-202ENST00000421712 SCNN1DP51172 638 aa19.47■□□□□ 0.71
BRAT1-202ENST00000421712 RSBN1LQ6PCB5 846 aaPredicted RBP19.47■□□□□ 0.71
BRAT1-202ENST00000421712 NEUROD6Q96NK8 337 aa19.47■□□□□ 0.71
BRAT1-202ENST00000421712 TAF1DQ9H5J8 278 aaPredicted RBP19.47■□□□□ 0.71
BRAT1-202ENST00000421712 GPRC5DQ9NZD1 345 aa19.47■□□□□ 0.71
BRAT1-202ENST00000421712 CNOT7Q9UIV1 285 aaKnown RBP19.47■□□□□ 0.71
BRAT1-202ENST00000421712 IL1R1P14778 569 aa19.46■□□□□ 0.71
BRAT1-202ENST00000421712 RPS12P25398 132 aaKnown RBP19.46■□□□□ 0.71
BRAT1-202ENST00000421712 TIMM10P62072 90 aa19.46■□□□□ 0.71
BRAT1-202ENST00000421712 STRIP1Q5VSL9 837 aa19.46■□□□□ 0.71
BRAT1-202ENST00000421712 FBXO33Q7Z6M2 555 aa19.46■□□□□ 0.71
BRAT1-202ENST00000421712 IQSEC3Q9UPP2 1182 aaPredicted RBP19.46■□□□□ 0.71
BRAT1-202ENST00000421712 JAG2Q9Y219 1238 aa19.46■□□□□ 0.71
BRAT1-202ENST00000421712 CLEC11AQ9Y240 323 aa19.46■□□□□ 0.71
BRAT1-202ENST00000421712 EXOC6BQ9Y2D4 811 aa19.46■□□□□ 0.71
BRAT1-202ENST00000421712 SCN9AQ15858 1988 aa19.46■□□□□ 0.71
BRAT1-202ENST00000421712 TOMM70O94826 608 aa19.45■□□□□ 0.7
BRAT1-202ENST00000421712 SASH1O94885 1247 aa19.45■□□□□ 0.7
BRAT1-202ENST00000421712 HSP90AB4PQ58FF6 505 aa19.45■□□□□ 0.7
BRAT1-202ENST00000421712 MICALL2Q8IY33 904 aa19.45■□□□□ 0.7
BRAT1-202ENST00000421712 MXD3Q9BW11 206 aa19.45■□□□□ 0.7
BRAT1-202ENST00000421712 NOP58Q9Y2X3 529 aaKnown RBP19.45■□□□□ 0.7
BRAT1-202ENST00000421712 A0A1B0GUL7 405 aa19.44■□□□□ 0.7
BRAT1-202ENST00000421712 APBB1O00213 710 aa19.44■□□□□ 0.7
BRAT1-202ENST00000421712 GORABQ5T7V8 394 aa19.44■□□□□ 0.7
BRAT1-202ENST00000421712 PNMA8AQ86V59 439 aaPredicted RBP19.44■□□□□ 0.7
BRAT1-202ENST00000421712 SIRT2Q8IXJ6 389 aa19.44■□□□□ 0.7
BRAT1-202ENST00000421712 AGBL3Q8NEM8 1001 aa19.44■□□□□ 0.7
BRAT1-202ENST00000421712 TDRD7Q8NHU6 1098 aaKnown RBP19.44■□□□□ 0.7
BRAT1-202ENST00000421712 DPF2Q92785 391 aa19.44■□□□□ 0.7
BRAT1-202ENST00000421712 BCL11AQ9H165 835 aa19.44■□□□□ 0.7
BRAT1-202ENST00000421712 SCN4AP35499 1836 aa19.44■□□□□ 0.7
BRAT1-202ENST00000421712 CHAF1AQ13111 956 aaPredicted RBP19.43■□□□□ 0.7
BRAT1-202ENST00000421712 DACT2Q5SW24 774 aa19.43■□□□□ 0.7
BRAT1-202ENST00000421712 RBM26Q5T8P6 1007 aaKnown RBP19.43■□□□□ 0.7
BRAT1-202ENST00000421712 ERC1Q8IUD2 1116 aa19.43■□□□□ 0.7
BRAT1-202ENST00000421712 ADARB2Q9NS39 739 aaKnown RBP19.43■□□□□ 0.7
BRAT1-202ENST00000421712 GNL3LQ9NVN8 582 aaKnown RBP19.43■□□□□ 0.7
BRAT1-202ENST00000421712 SHTN1A0MZ66 631 aa19.42■□□□□ 0.7
BRAT1-202ENST00000421712 ADORA1P30542 326 aa19.42■□□□□ 0.7
BRAT1-202ENST00000421712 XAGE2Q96GT9 111 aa19.42■□□□□ 0.7
BRAT1-202ENST00000421712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.42■□□□□ 0.7
BRAT1-202ENST00000421712 MYO3BQ8WXR4 1341 aa19.42■□□□□ 0.7
BRAT1-202ENST00000421712 USP17L8P0C7I0 530 aa19.41■□□□□ 0.7
BRAT1-202ENST00000421712 USP50Q70EL3 339 aaPredicted RBP19.41■□□□□ 0.7
BRAT1-202ENST00000421712 OGFOD1Q8N543 542 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms