RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 SOGA3Q5TF21 947 aa15.32■□□□□ 0.04
TMEM53-206ENST00000420706 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
TMEM53-206ENST00000420706 C15orf52Q6ZUT6 534 aaKnown RBP15.32■□□□□ 0.04
TMEM53-206ENST00000420706 STAP2Q9UGK3 403 aa15.32■□□□□ 0.04
TMEM53-206ENST00000420706 IRS2Q9Y4H2 1338 aa15.32■□□□□ 0.04
TMEM53-206ENST00000420706 SNED1Q8TER0 1413 aa15.32■□□□□ 0.04
TMEM53-206ENST00000420706 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
TMEM53-206ENST00000420706 C6orf229H3BNL8 230 aa15.31■□□□□ 0.04
TMEM53-206ENST00000420706 MX1P20591 662 aa15.31■□□□□ 0.04
TMEM53-206ENST00000420706 RGS3P49796 1198 aa15.31■□□□□ 0.04
TMEM53-206ENST00000420706 PDE1AP54750 535 aa15.31■□□□□ 0.04
TMEM53-206ENST00000420706 RTKN2Q8IZC4 609 aa15.31■□□□□ 0.04
TMEM53-206ENST00000420706 RTFDC1Q9BY42 306 aaPredicted RBP15.31■□□□□ 0.04
TMEM53-206ENST00000420706 OSBPL3Q9H4L5 887 aa15.31■□□□□ 0.04
TMEM53-206ENST00000420706 LTBP1Q14766 1721 aa15.31■□□□□ 0.04
TMEM53-206ENST00000420706 KLRK1P26718 216 aa15.3■□□□□ 0.04
TMEM53-206ENST00000420706 TTC41PQ6P2S7 1318 aa15.3■□□□□ 0.04
TMEM53-206ENST00000420706 FBXO33Q7Z6M2 555 aa15.3■□□□□ 0.04
TMEM53-206ENST00000420706 TXNRD3Q86VQ6 643 aa15.3■□□□□ 0.04
TMEM53-206ENST00000420706 FAM84BQ96KN1 310 aaPredicted RBP15.3■□□□□ 0.04
TMEM53-206ENST00000420706 GPR101Q96P66 508 aaPredicted RBP15.3■□□□□ 0.04
TMEM53-206ENST00000420706 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
TMEM53-206ENST00000420706 GYG1P46976 350 aa15.29■□□□□ 0.04
TMEM53-206ENST00000420706 BCAMP50895 628 aa15.29■□□□□ 0.04
TMEM53-206ENST00000420706 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
TMEM53-206ENST00000420706 GORABQ5T7V8 394 aa15.29■□□□□ 0.04
TMEM53-206ENST00000420706 CCDC102BQ68D86 513 aa15.29■□□□□ 0.04
TMEM53-206ENST00000420706 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
TMEM53-206ENST00000420706 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
TMEM53-206ENST00000420706 DUOX1Q9NRD9 1551 aa15.28■□□□□ 0.04
TMEM53-206ENST00000420706 PHKA1P46020 1223 aa15.28■□□□□ 0.04
TMEM53-206ENST00000420706 CAVIN4Q5BKX8 364 aa15.28■□□□□ 0.04
TMEM53-206ENST00000420706 TSHZ3Q63HK5 1081 aa15.28■□□□□ 0.04
TMEM53-206ENST00000420706 SUPT20HQ8NEM7 779 aa15.28■□□□□ 0.04
TMEM53-206ENST00000420706 GPATCH3Q96I76 525 aa15.28■□□□□ 0.04
TMEM53-206ENST00000420706 PSMD1Q99460 953 aa15.28■□□□□ 0.04
TMEM53-206ENST00000420706 EYA3Q99504 573 aa15.28■□□□□ 0.04
TMEM53-206ENST00000420706 ZC3H12CQ9C0D7 883 aaKnown RBP15.28■□□□□ 0.04
TMEM53-206ENST00000420706 ARFGEF1Q9Y6D6 1849 aa15.28■□□□□ 0.04
TMEM53-206ENST00000420706 MED23Q9ULK4 1368 aa15.27■□□□□ 0.04
TMEM53-206ENST00000420706 AOX1Q06278 1338 aa15.27■□□□□ 0.04
TMEM53-206ENST00000420706 RIMBP2O15034 1052 aa15.27■□□□□ 0.04
TMEM53-206ENST00000420706 ATP5JP18859 108 aa15.27■□□□□ 0.04
TMEM53-206ENST00000420706 HIBADHP31937 336 aaKnown RBP15.27■□□□□ 0.04
TMEM53-206ENST00000420706 FKBP4Q02790 459 aaKnown RBP eCLIP15.27■□□□□ 0.04
TMEM53-206ENST00000420706 WASHC4Q2M389 1173 aa15.27■□□□□ 0.04
TMEM53-206ENST00000420706 TTC39AQ5SRH9 613 aa15.27■□□□□ 0.04
TMEM53-206ENST00000420706 PI4K2BQ8TCG2 481 aa15.27■□□□□ 0.04
TMEM53-206ENST00000420706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.27■□□□□ 0.04
TMEM53-206ENST00000420706 ZNF512BQ96KM6 892 aaPredicted RBP15.27■□□□□ 0.04
TMEM53-206ENST00000420706 ERC2O15083 957 aa15.26■□□□□ 0.03
TMEM53-206ENST00000420706 UQCRFS1P1P0C7P4 283 aa15.26■□□□□ 0.03
TMEM53-206ENST00000420706 ARID4AP29374 1257 aaPredicted RBP15.26■□□□□ 0.03
TMEM53-206ENST00000420706 BOLA2Q9H3K6 86 aa15.26■□□□□ 0.03
TMEM53-206ENST00000420706 FER1L6Q2WGJ9 1857 aa15.26■□□□□ 0.03
TMEM53-206ENST00000420706 NFKBIEO00221 500 aa15.25■□□□□ 0.03
TMEM53-206ENST00000420706 ZBTB22O15209 634 aa15.25■□□□□ 0.03
TMEM53-206ENST00000420706 GLRX3O76003 335 aaKnown RBP15.25■□□□□ 0.03
TMEM53-206ENST00000420706 GPR162Q16538 588 aa15.25■□□□□ 0.03
TMEM53-206ENST00000420706 TTC22Q5TAA0 569 aa15.25■□□□□ 0.03
TMEM53-206ENST00000420706 ZNF804AQ7Z570 1209 aa15.25■□□□□ 0.03
TMEM53-206ENST00000420706 VPS37DQ86XT2 251 aa15.25■□□□□ 0.03
TMEM53-206ENST00000420706 VPS33BQ9H267 617 aa15.25■□□□□ 0.03
TMEM53-206ENST00000420706 CD209Q9NNX6 404 aa15.25■□□□□ 0.03
TMEM53-206ENST00000420706 GNL3LQ9NVN8 582 aaKnown RBP15.25■□□□□ 0.03
TMEM53-206ENST00000420706 YBX3P16989 372 aaKnown RBP eCLIP15.24■□□□□ 0.03
TMEM53-206ENST00000420706 MCAMP43121 646 aa15.24■□□□□ 0.03
TMEM53-206ENST00000420706 KIAA2012Q0VF49 1180 aa15.24■□□□□ 0.03
TMEM53-206ENST00000420706 SCARF1Q14162 830 aa15.24■□□□□ 0.03
TMEM53-206ENST00000420706 TDRD7Q8NHU6 1098 aaKnown RBP15.24■□□□□ 0.03
TMEM53-206ENST00000420706 COA1Q9GZY4 146 aa15.24■□□□□ 0.03
TMEM53-206ENST00000420706 TAOK3Q9H2K8 898 aa15.24■□□□□ 0.03
TMEM53-206ENST00000420706 LTBP3Q9NS15 1303 aa15.23■□□□□ 0.03
TMEM53-206ENST00000420706 IL1R1P14778 569 aa15.23■□□□□ 0.03
TMEM53-206ENST00000420706 GSPT1P15170 499 aaKnown RBP15.23■□□□□ 0.03
TMEM53-206ENST00000420706 AOC3Q16853 763 aa15.23■□□□□ 0.03
TMEM53-206ENST00000420706 DOK7Q18PE1 504 aa15.23■□□□□ 0.03
TMEM53-206ENST00000420706 ARHGAP27Q6ZUM4 889 aa15.23■□□□□ 0.03
TMEM53-206ENST00000420706 HAUS7Q99871 368 aa15.23■□□□□ 0.03
TMEM53-206ENST00000420706 ZNF277Q9NRM2 450 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-206ENST00000420706 HMG20BQ9P0W2 317 aa15.23■□□□□ 0.03
TMEM53-206ENST00000420706 IQSEC3Q9UPP2 1182 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-206ENST00000420706 AKAP11Q9UKA4 1901 aa15.22■□□□□ 0.03
TMEM53-206ENST00000420706 SEMA3EO15041 775 aa15.22■□□□□ 0.03
TMEM53-206ENST00000420706 PPIP5K2O43314 1243 aa15.22■□□□□ 0.03
TMEM53-206ENST00000420706 IARSP41252 1262 aaKnown RBP15.22■□□□□ 0.03
TMEM53-206ENST00000420706 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
TMEM53-206ENST00000420706 SNRKQ9NRH2 765 aa15.22■□□□□ 0.03
TMEM53-206ENST00000420706 DENND2AQ9ULE3 1009 aa15.22■□□□□ 0.03
TMEM53-206ENST00000420706 NDUFB9Q9Y6M9 179 aa15.22■□□□□ 0.03
TMEM53-206ENST00000420706 G3V3G9 751 aa15.21■□□□□ 0.03
TMEM53-206ENST00000420706 MAP4K4O95819 1239 aaPredicted RBP15.21■□□□□ 0.03
TMEM53-206ENST00000420706 ZAP70P43403 619 aa15.21■□□□□ 0.03
TMEM53-206ENST00000420706 PRELPP51888 382 aa15.21■□□□□ 0.03
TMEM53-206ENST00000420706 RASSF7Q02833 373 aa15.21■□□□□ 0.03
TMEM53-206ENST00000420706 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
TMEM53-206ENST00000420706 PI16Q6UXB8 463 aa15.21■□□□□ 0.03
TMEM53-206ENST00000420706 PODNQ7Z5L7 613 aa15.21■□□□□ 0.03
TMEM53-206ENST00000420706 LARGE2Q8N3Y3 721 aa15.21■□□□□ 0.03
TMEM53-206ENST00000420706 SPATA5Q8NB90 893 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms