RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 SF3A1Q15459 793 aaKnown RBP16.33■□□□□ 0.21
CCT6P3-201ENST00000419314 CCDC102BQ68D86 513 aa16.33■□□□□ 0.21
CCT6P3-201ENST00000419314 CDC5LQ99459 802 aaKnown RBP16.33■□□□□ 0.21
CCT6P3-201ENST00000419314 PALLDQ8WX93 1383 aa16.33■□□□□ 0.21
CCT6P3-201ENST00000419314 COL9A3Q14050 684 aaPredicted RBP16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 MIGA1Q8NAN2 632 aa16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 SETDB2Q96T68 719 aa16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 MAST3O60307 1309 aa16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 M0R2C6 588 aa16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 HMGB1P09429 215 aaKnown RBP16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 ANKRD18AQ8IVF6 992 aa16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 CCDC144CPQ8IYA2 1237 aa16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 MAGEB6Q8N7X4 407 aa16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 GPT2Q8TD30 523 aa16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 NSFL1CQ9UNZ2 370 aaKnown RBP16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 JAG2Q9Y219 1238 aa16.33■□□□□ 0.2
CCT6P3-201ENST00000419314 PUM3Q15397 648 aaKnown RBP16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 ZMYM1Q5SVZ6 1142 aa16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 NAPBQ9H115 298 aa16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 CCNL1Q9UK58 526 aaPredicted RBP16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 MINDY4BA8MYZ0 360 aa16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 UQCRFS1P1P0C7P4 283 aa16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 BCAMP50895 628 aa16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 TTF1Q15361 905 aaPredicted RBP16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 PARP10Q53GL7 1025 aa16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 APPBP2Q92624 585 aa16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 CHMP4CQ96CF2 233 aa16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 GNL3LQ9NVN8 582 aaKnown RBP16.32■□□□□ 0.2
CCT6P3-201ENST00000419314 SPATA32Q96LK8 384 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 PUS7LQ9H0K6 701 aaKnown RBP16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 E7EWF7 191 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 CAMK4Q16566 473 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 LPIN2Q92539 896 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 TMEM63CQ9P1W3 806 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 THRAP3Q9Y2W1 955 aaKnown RBP16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 KDM3BQ7LBC6 1761 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 GOLGA8BA8MQT2 603 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 MCAMP43121 646 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 CDC37L1Q7L3B6 337 aa16.31■□□□□ 0.2
CCT6P3-201ENST00000419314 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 RFC4P35249 363 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 FBXW7Q969H0 707 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 SRP68Q9UHB9 627 aaKnown RBP16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 ZNF532Q9HCE3 1301 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 KLF18A0A0U1RQI7 1052 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 FGAP02671 866 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 RXRAP19793 462 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 TSPY26PQ9H489 355 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 UBN2Q6ZU65 1347 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 ZRSR1Q15695 479 aaKnown RBP16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 USPL1Q5W0Q7 1092 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 RIPOR2Q9Y4F9 1068 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 ZNF609O15014 1411 aa16.3■□□□□ 0.2
CCT6P3-201ENST00000419314 PRC1O43663 620 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 CSF1RP07333 972 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 CAVIN4Q5BKX8 364 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 GPHNQ9NQX3 736 aaPredicted RBP16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 MTMR6Q9Y217 621 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 SLC4A8Q2Y0W8 1093 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 NCOA7Q8NI08 942 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 AK7Q96M32 723 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 NACAP1Q9BZK3 213 aa16.29■□□□□ 0.2
CCT6P3-201ENST00000419314 MBD4O95243 580 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 MCM5P33992 734 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 SPATA31A5Q5VU36 1347 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 SPATA31A7Q8IWB4 1347 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 BCL9O00512 1426 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 ERFEQ4G0M1 354 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 INTS5Q6P9B9 1019 aaKnown RBP16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 MICU3Q86XE3 530 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 FBXO3Q9UK99 471 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 CYP7A1P22680 504 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 TOB2Q14106 344 aaPredicted RBP16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 SPATA5Q8NB90 893 aa16.28■□□□□ 0.2
CCT6P3-201ENST00000419314 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.2
CCT6P3-201ENST00000419314 USP54Q70EL1 1684 aa16.27■□□□□ 0.2
CCT6P3-201ENST00000419314 GYG1P46976 350 aa16.27■□□□□ 0.2
CCT6P3-201ENST00000419314 NUP133Q8WUM0 1156 aa16.27■□□□□ 0.2
CCT6P3-201ENST00000419314 ANKIB1Q9P2G1 1089 aa16.27■□□□□ 0.2
CCT6P3-201ENST00000419314 WWC3Q9ULE0 1092 aa16.27■□□□□ 0.2
CCT6P3-201ENST00000419314 GIMAP6Q6P9H5 292 aa16.27■□□□□ 0.19
CCT6P3-201ENST00000419314 PIH1D3Q9NQM4 214 aaKnown RBP16.27■□□□□ 0.19
CCT6P3-201ENST00000419314 MTMR7Q9Y216 660 aa16.27■□□□□ 0.19
CCT6P3-201ENST00000419314 ERICH2A1L162 156 aa16.27■□□□□ 0.19
CCT6P3-201ENST00000419314 PTPDC1A2A3K4 754 aa16.27■□□□□ 0.19
CCT6P3-201ENST00000419314 PDE6AP16499 860 aa16.27■□□□□ 0.19
CCT6P3-201ENST00000419314 PTF1AQ7RTS3 328 aa16.27■□□□□ 0.19
CCT6P3-201ENST00000419314 CHRNDQ07001 517 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms