RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 RPS12P25398 132 aaKnown RBP31.53■■■□□ 2.64
CPNE1-207ENST00000414664 MTX1Q13505 466 aa31.53■■■□□ 2.64
CPNE1-207ENST00000414664 SNAP23O00161 211 aa31.52■■■□□ 2.64
CPNE1-207ENST00000414664 SRGAP3O43295 1099 aa31.52■■■□□ 2.64
CPNE1-207ENST00000414664 KLRK1P26718 216 aa31.52■■■□□ 2.64
CPNE1-207ENST00000414664 EPS15P42566 896 aa31.52■■■□□ 2.64
CPNE1-207ENST00000414664 EAPPQ56P03 285 aaPredicted RBP31.52■■■□□ 2.64
CPNE1-207ENST00000414664 PANK1Q8TE04 598 aa31.52■■■□□ 2.64
CPNE1-207ENST00000414664 DPF2Q92785 391 aa31.52■■■□□ 2.64
CPNE1-207ENST00000414664 USP17L3A6NCW0 530 aa31.51■■■□□ 2.63
CPNE1-207ENST00000414664 USP17L4A6NCW7 530 aa31.51■■■□□ 2.63
CPNE1-207ENST00000414664 ZBTB7BO15156 539 aaPredicted RBP31.51■■■□□ 2.63
CPNE1-207ENST00000414664 PDE8BO95263 885 aa31.51■■■□□ 2.63
CPNE1-207ENST00000414664 USP17L1Q7RTZ2 530 aa31.51■■■□□ 2.63
CPNE1-207ENST00000414664 ZNF804AQ7Z570 1209 aa31.51■■■□□ 2.63
CPNE1-207ENST00000414664 LDHDQ86WU2 507 aa31.51■■■□□ 2.63
CPNE1-207ENST00000414664 ADARB2Q9NS39 739 aaKnown RBP31.51■■■□□ 2.63
CPNE1-207ENST00000414664 CIAO1O76071 339 aa31.5■■■□□ 2.63
CPNE1-207ENST00000414664 USP50Q70EL3 339 aaPredicted RBP31.5■■■□□ 2.63
CPNE1-207ENST00000414664 COPRSQ9NQ92 184 aa31.5■■■□□ 2.63
CPNE1-207ENST00000414664 CNOT7Q9UIV1 285 aaKnown RBP31.5■■■□□ 2.63
CPNE1-207ENST00000414664 ZBTB12Q9Y330 459 aaPredicted RBP31.5■■■□□ 2.63
CPNE1-207ENST00000414664 IRS2Q9Y4H2 1338 aa31.49■■■□□ 2.63
CPNE1-207ENST00000414664 H7C1D1 291 aa31.49■■■□□ 2.63
CPNE1-207ENST00000414664 CHADLQ6NUI6 762 aa31.49■■■□□ 2.63
CPNE1-207ENST00000414664 CD209Q9NNX6 404 aa31.49■■■□□ 2.63
CPNE1-207ENST00000414664 CLEC11AQ9Y240 323 aa31.49■■■□□ 2.63
CPNE1-207ENST00000414664 SCN9AQ15858 1988 aa31.48■■■□□ 2.63
CPNE1-207ENST00000414664 AGBL3Q8NEM8 1001 aa31.48■■■□□ 2.63
CPNE1-207ENST00000414664 SIL1Q9H173 461 aa31.48■■■□□ 2.63
CPNE1-207ENST00000414664 RSBN1LQ6PCB5 846 aaPredicted RBP31.47■■■□□ 2.63
CPNE1-207ENST00000414664 VGLL2Q8N8G2 317 aa31.47■■■□□ 2.63
CPNE1-207ENST00000414664 POTEIP0CG38 1075 aa31.46■■■□□ 2.63
CPNE1-207ENST00000414664 POTEJP0CG39 1038 aa31.46■■■□□ 2.63
CPNE1-207ENST00000414664 IL15P40933 162 aaPredicted RBP31.46■■■□□ 2.63
CPNE1-207ENST00000414664 STRIP1Q5VSL9 837 aa31.46■■■□□ 2.63
CPNE1-207ENST00000414664 ATG9AQ7Z3C6 839 aa31.46■■■□□ 2.63
CPNE1-207ENST00000414664 MICALL2Q8IY33 904 aa31.46■■■□□ 2.63
CPNE1-207ENST00000414664 PSME4Q14997 1843 aa31.45■■■□□ 2.63
CPNE1-207ENST00000414664 MVPQ14764 893 aaKnown RBP31.45■■■□□ 2.63
CPNE1-207ENST00000414664 PUM3Q15397 648 aaKnown RBP31.45■■■□□ 2.63
CPNE1-207ENST00000414664 FBXW7Q969H0 707 aa31.45■■■□□ 2.63
CPNE1-207ENST00000414664 CHMP4BQ9H444 224 aaKnown RBP31.45■■■□□ 2.63
CPNE1-207ENST00000414664 CEP126Q9P2H0 1117 aa31.45■■■□□ 2.63
CPNE1-207ENST00000414664 DDX19BQ9UMR2 479 aa31.45■■■□□ 2.63
CPNE1-207ENST00000414664 PA2G4Q9UQ80 394 aaKnown RBP31.45■■■□□ 2.63
CPNE1-207ENST00000414664 IL1R1P14778 569 aa31.44■■■□□ 2.62
CPNE1-207ENST00000414664 HSPA6P17066 643 aa31.44■■■□□ 2.62
CPNE1-207ENST00000414664 PDE3AQ14432 1141 aa31.44■■■□□ 2.62
CPNE1-207ENST00000414664 TTLL5Q6EMB2 1281 aa31.44■■■□□ 2.62
CPNE1-207ENST00000414664 ZNF609O15014 1411 aa31.43■■■□□ 2.62
CPNE1-207ENST00000414664 IFIT1P09914 478 aaKnown RBP31.43■■■□□ 2.62
CPNE1-207ENST00000414664 HIBADHP31937 336 aaKnown RBP31.43■■■□□ 2.62
CPNE1-207ENST00000414664 MYO3BQ8WXR4 1341 aa31.43■■■□□ 2.62
CPNE1-207ENST00000414664 ATP8B2P98198 1209 aa31.42■■■□□ 2.62
CPNE1-207ENST00000414664 CAVIN4Q5BKX8 364 aa31.42■■■□□ 2.62
CPNE1-207ENST00000414664 DACT2Q5SW24 774 aa31.42■■■□□ 2.62
CPNE1-207ENST00000414664 COG6Q9Y2V7 657 aa31.42■■■□□ 2.62
CPNE1-207ENST00000414664 PNMA6EA0A0J9YXQ4 647 aa31.41■■■□□ 2.62
CPNE1-207ENST00000414664 GTF2IP78347 998 aa31.41■■■□□ 2.62
CPNE1-207ENST00000414664 VPS37DQ86XT2 251 aa31.41■■■□□ 2.62
CPNE1-207ENST00000414664 FAM84BQ96KN1 310 aaPredicted RBP31.41■■■□□ 2.62
CPNE1-207ENST00000414664 C1orf115Q9H7X2 142 aa31.41■■■□□ 2.62
CPNE1-207ENST00000414664 SLC5A1P13866 664 aa31.4■■■□□ 2.62
CPNE1-207ENST00000414664 GYG1P46976 350 aa31.4■■■□□ 2.62
CPNE1-207ENST00000414664 LPIN2Q92539 896 aa31.4■■■□□ 2.62
CPNE1-207ENST00000414664 ADAMTSL1Q8N6G6 1762 aa31.39■■■□□ 2.62
CPNE1-207ENST00000414664 FGFR2P21802 821 aa31.39■■■□□ 2.62
CPNE1-207ENST00000414664 GMLQ99445 158 aa31.39■■■□□ 2.62
CPNE1-207ENST00000414664 SHTN1A0MZ66 631 aa31.38■■■□□ 2.61
CPNE1-207ENST00000414664 USP17L8P0C7I0 530 aa31.38■■■□□ 2.61
CPNE1-207ENST00000414664 SASH1O94885 1247 aa31.37■■■□□ 2.61
CPNE1-207ENST00000414664 MMP14P50281 582 aa31.37■■■□□ 2.61
CPNE1-207ENST00000414664 G3BP1Q13283 466 aaKnown RBP eCLIP31.37■■■□□ 2.614e-8■□□□□ 11
CPNE1-207ENST00000414664 POLA2Q14181 598 aa31.37■■■□□ 2.61
CPNE1-207ENST00000414664 FBXO33Q7Z6M2 555 aa31.37■■■□□ 2.61
CPNE1-207ENST00000414664 TDRD7Q8NHU6 1098 aaKnown RBP31.37■■■□□ 2.61
CPNE1-207ENST00000414664 SSH3Q8TE77 659 aa31.37■■■□□ 2.61
CPNE1-207ENST00000414664 ZC3H15Q8WU90 426 aaKnown RBP31.37■■■□□ 2.61
CPNE1-207ENST00000414664 APLP1P51693 650 aa31.36■■■□□ 2.61
CPNE1-207ENST00000414664 ATP2B3Q16720 1220 aa31.36■■■□□ 2.61
CPNE1-207ENST00000414664 SAMD7Q7Z3H4 446 aa31.36■■■□□ 2.61
CPNE1-207ENST00000414664 OGFOD1Q8N543 542 aa31.36■■■□□ 2.61
CPNE1-207ENST00000414664 TRPM4Q8TD43 1214 aa31.36■■■□□ 2.61
CPNE1-207ENST00000414664 ZNF280AP59817 542 aaPredicted RBP31.35■■■□□ 2.61
CPNE1-207ENST00000414664 TBC1D10BQ4KMP7 808 aaPredicted RBP31.35■■■□□ 2.61
CPNE1-207ENST00000414664 MAP1SQ66K74 1059 aaPredicted RBP31.35■■■□□ 2.61
CPNE1-207ENST00000414664 CNTROBQ8N137 903 aa31.35■■■□□ 2.61
CPNE1-207ENST00000414664 HIRAP54198 1017 aaPredicted RBP31.34■■■□□ 2.61
CPNE1-207ENST00000414664 FKBP1AP62942 108 aaKnown RBP31.34■■■□□ 2.61
CPNE1-207ENST00000414664 RBM26Q5T8P6 1007 aaKnown RBP31.34■■■□□ 2.61
CPNE1-207ENST00000414664 MXD3Q9BW11 206 aa31.34■■■□□ 2.61
CPNE1-207ENST00000414664 AKAP2Q9Y2D5 859 aa31.34■■■□□ 2.61
CPNE1-207ENST00000414664 FAM205AQ6ZU69 1335 aa31.33■■■□□ 2.61
CPNE1-207ENST00000414664 FRAT2O75474 233 aaPredicted RBP31.33■■■□□ 2.61
CPNE1-207ENST00000414664 KIF4BQ2VIQ3 1234 aa31.33■■■□□ 2.61
CPNE1-207ENST00000414664 C20orf194Q5TEA3 1177 aa31.33■■■□□ 2.61
CPNE1-207ENST00000414664 ZBTB40Q9NUA8 1239 aa31.33■■■□□ 2.61
CPNE1-207ENST00000414664 PGAP2Q9UHJ9 254 aa31.33■■■□□ 2.61
CPNE1-207ENST00000414664 CEP85Q6P2H3 762 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms