RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 ZNF784Q8NCA9 323 aaPredicted RBP20.42■□□□□ 0.86
LINC00398-201ENST00000414407 DBNDD1Q9H9R9 158 aa20.42■□□□□ 0.86
LINC00398-201ENST00000414407 ZNF541Q9H0D2 1346 aa20.42■□□□□ 0.86
LINC00398-201ENST00000414407 YDJCA8MPS7 323 aa20.41■□□□□ 0.86
LINC00398-201ENST00000414407 SURF6O75683 361 aaKnown RBP20.41■□□□□ 0.86
LINC00398-201ENST00000414407 KLRK1P26718 216 aa20.41■□□□□ 0.86
LINC00398-201ENST00000414407 CXCL9Q07325 125 aa20.41■□□□□ 0.86
LINC00398-201ENST00000414407 TNIP1Q15025 636 aa20.41■□□□□ 0.86
LINC00398-201ENST00000414407 SIRT2Q8IXJ6 389 aa20.41■□□□□ 0.86
LINC00398-201ENST00000414407 LPIN2Q92539 896 aa20.41■□□□□ 0.86
LINC00398-201ENST00000414407 IFIT1P09914 478 aaKnown RBP20.4■□□□□ 0.86
LINC00398-201ENST00000414407 HSP90AB4PQ58FF6 505 aa20.4■□□□□ 0.86
LINC00398-201ENST00000414407 CIAPIN1Q6FI81 312 aa20.4■□□□□ 0.86
LINC00398-201ENST00000414407 ZNF804AQ7Z570 1209 aa20.4■□□□□ 0.86
LINC00398-201ENST00000414407 L3MBTL3Q96JM7 780 aaPredicted RBP20.4■□□□□ 0.86
LINC00398-201ENST00000414407 AKAP2Q9Y2D5 859 aa20.4■□□□□ 0.86
LINC00398-201ENST00000414407 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.85
LINC00398-201ENST00000414407 SLC5A1P13866 664 aa20.39■□□□□ 0.85
LINC00398-201ENST00000414407 GPBP1L1Q9HC44 474 aaPredicted RBP20.39■□□□□ 0.85
LINC00398-201ENST00000414407 SASH1O94885 1247 aa20.38■□□□□ 0.85
LINC00398-201ENST00000414407 IL1R1P14778 569 aa20.38■□□□□ 0.85
LINC00398-201ENST00000414407 TFCP2Q12800 502 aa20.38■□□□□ 0.85
LINC00398-201ENST00000414407 ATP2B3Q16720 1220 aa20.38■□□□□ 0.85
LINC00398-201ENST00000414407 CAVIN4Q5BKX8 364 aa20.38■□□□□ 0.85
LINC00398-201ENST00000414407 FAM84BQ96KN1 310 aaPredicted RBP20.38■□□□□ 0.85
LINC00398-201ENST00000414407 CD209Q9NNX6 404 aa20.38■□□□□ 0.85
LINC00398-201ENST00000414407 RAD17O75943 681 aa20.37■□□□□ 0.85
LINC00398-201ENST00000414407 HIBADHP31937 336 aaKnown RBP20.37■□□□□ 0.85
LINC00398-201ENST00000414407 OS9Q13438 667 aaPredicted RBP20.37■□□□□ 0.85
LINC00398-201ENST00000414407 FBXO33Q7Z6M2 555 aa20.37■□□□□ 0.85
LINC00398-201ENST00000414407 ERC1Q8IUD2 1116 aa20.37■□□□□ 0.85
LINC00398-201ENST00000414407 GPR108Q9NPR9 543 aa20.37■□□□□ 0.85
LINC00398-201ENST00000414407 WDR90Q96KV7 1748 aa20.36■□□□□ 0.85
LINC00398-201ENST00000414407 VIL1P09327 827 aaKnown RBP20.36■□□□□ 0.85
LINC00398-201ENST00000414407 ZNF526Q8TF50 670 aaPredicted RBP20.36■□□□□ 0.85
LINC00398-201ENST00000414407 USP17L3A6NCW0 530 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 USP17L4A6NCW7 530 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 PSMD14O00487 310 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 ZBTB22O15209 634 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 GYG1P46976 350 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 STRIP1Q5VSL9 837 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 USP17L1Q7RTZ2 530 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 KCNQ5Q9NR82 932 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 PCDHB15Q9Y5E8 787 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 GJA3Q9Y6H8 435 aa20.35■□□□□ 0.85
LINC00398-201ENST00000414407 IQCA1LA6NCM1 817 aa20.34■□□□□ 0.85
LINC00398-201ENST00000414407 RAB11FIP3O75154 756 aa20.34■□□□□ 0.85
LINC00398-201ENST00000414407 VEGFAP15692 232 aaPredicted RBP20.34■□□□□ 0.85
LINC00398-201ENST00000414407 RPS12P25398 132 aaKnown RBP20.34■□□□□ 0.85
LINC00398-201ENST00000414407 VPS37DQ86XT2 251 aa20.34■□□□□ 0.85
LINC00398-201ENST00000414407 TDRD7Q8NHU6 1098 aaKnown RBP20.34■□□□□ 0.85
LINC00398-201ENST00000414407 DPF2Q92785 391 aa20.34■□□□□ 0.85
LINC00398-201ENST00000414407 EXOC6BQ9Y2D4 811 aa20.34■□□□□ 0.85
LINC00398-201ENST00000414407 ZNF609O15014 1411 aa20.34■□□□□ 0.85
LINC00398-201ENST00000414407 A0A1B0GUL7 405 aa20.33■□□□□ 0.85
LINC00398-201ENST00000414407 POTECB2RU33 542 aa20.33■□□□□ 0.85
LINC00398-201ENST00000414407 EXOC6Q8TAG9 804 aa20.33■□□□□ 0.85
LINC00398-201ENST00000414407 RRAGCQ9HB90 399 aa20.33■□□□□ 0.85
LINC00398-201ENST00000414407 NMRK2Q9NPI5 230 aa20.33■□□□□ 0.85
LINC00398-201ENST00000414407 CENPBP07199 599 aaPredicted RBP20.32■□□□□ 0.84
LINC00398-201ENST00000414407 BCAMP50895 628 aa20.32■□□□□ 0.84
LINC00398-201ENST00000414407 TIMM10P62072 90 aa20.32■□□□□ 0.84
LINC00398-201ENST00000414407 TTLL5Q6EMB2 1281 aa20.32■□□□□ 0.84
LINC00398-201ENST00000414407 AGBL3Q8NEM8 1001 aa20.32■□□□□ 0.84
LINC00398-201ENST00000414407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.32■□□□□ 0.84
LINC00398-201ENST00000414407 SCN9AQ15858 1988 aa20.32■□□□□ 0.84
LINC00398-201ENST00000414407 MYO3BQ8WXR4 1341 aa20.31■□□□□ 0.84
LINC00398-201ENST00000414407 GMPSP49915 693 aaPredicted RBP20.31■□□□□ 0.84
LINC00398-201ENST00000414407 SCNN1DP51172 638 aa20.31■□□□□ 0.84
LINC00398-201ENST00000414407 FKBP1AP62942 108 aaKnown RBP20.31■□□□□ 0.84
LINC00398-201ENST00000414407 TNNI3KQ59H18 835 aa20.31■□□□□ 0.84
LINC00398-201ENST00000414407 DACT2Q5SW24 774 aa20.31■□□□□ 0.84
LINC00398-201ENST00000414407 RSBN1LQ6PCB5 846 aaPredicted RBP20.31■□□□□ 0.84
LINC00398-201ENST00000414407 RHPN1Q8TCX5 695 aa20.31■□□□□ 0.84
LINC00398-201ENST00000414407 KIF1BPQ96EK5 621 aa20.31■□□□□ 0.84
LINC00398-201ENST00000414407 DCTPP1Q9H773 170 aa20.31■□□□□ 0.84
LINC00398-201ENST00000414407 HACL1Q9UJ83 578 aa20.31■□□□□ 0.84
LINC00398-201ENST00000414407 FPGT-TNNI3KV9GXZ4 949 aa20.31■□□□□ 0.84
LINC00398-201ENST00000414407 FAM205AQ6ZU69 1335 aa20.3■□□□□ 0.84
LINC00398-201ENST00000414407 PSME4Q14997 1843 aa20.3■□□□□ 0.84
LINC00398-201ENST00000414407 LMOD1P29536 600 aaPredicted RBP20.3■□□□□ 0.84
LINC00398-201ENST00000414407 MMP14P50281 582 aa20.3■□□□□ 0.84
LINC00398-201ENST00000414407 GTF2IP78347 998 aa20.3■□□□□ 0.84
LINC00398-201ENST00000414407 XAGE2Q96GT9 111 aa20.3■□□□□ 0.84
LINC00398-201ENST00000414407 NEUROD6Q96NK8 337 aa20.3■□□□□ 0.84
LINC00398-201ENST00000414407 GMLQ99445 158 aa20.3■□□□□ 0.84
LINC00398-201ENST00000414407 GNL3LQ9NVN8 582 aaKnown RBP20.3■□□□□ 0.84
LINC00398-201ENST00000414407 GPRC5DQ9NZD1 345 aa20.3■□□□□ 0.84
LINC00398-201ENST00000414407 SCN4AP35499 1836 aa20.3■□□□□ 0.84
LINC00398-201ENST00000414407 KIF3CO14782 793 aa20.29■□□□□ 0.84
LINC00398-201ENST00000414407 SEMA3EO15041 775 aa20.29■□□□□ 0.84
LINC00398-201ENST00000414407 HDAC1Q13547 482 aaPredicted RBP20.29■□□□□ 0.84
LINC00398-201ENST00000414407 ZBTB12Q9Y330 459 aaPredicted RBP20.29■□□□□ 0.84
LINC00398-201ENST00000414407 ARAP2Q8WZ64 1704 aa20.29■□□□□ 0.84
LINC00398-201ENST00000414407 ADORA1P30542 326 aa20.28■□□□□ 0.84
LINC00398-201ENST00000414407 CCDC102BQ68D86 513 aa20.28■□□□□ 0.84
LINC00398-201ENST00000414407 TAF1DQ9H5J8 278 aaPredicted RBP20.28■□□□□ 0.84
LINC00398-201ENST00000414407 FRAT2O75474 233 aaPredicted RBP20.27■□□□□ 0.84
LINC00398-201ENST00000414407 EPHX2P34913 555 aa20.27■□□□□ 0.84
LINC00398-201ENST00000414407 PNMA8AQ86V59 439 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms