RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PDE4DIPQ5VU43 2346 aa15.68■□□□□ 0.1
LIMS2-210ENST00000413578 TNRC18O15417 2968 aaPredicted RBP15.68■□□□□ 0.1
LIMS2-210ENST00000413578 PI4KAP2A4QPH2 592 aa15.68■□□□□ 0.1
LIMS2-210ENST00000413578 WNT10BO00744 389 aa15.68■□□□□ 0.1
LIMS2-210ENST00000413578 PI4KAP1Q8N8J0 262 aa15.68■□□□□ 0.1
LIMS2-210ENST00000413578 MXD3Q9BW11 206 aa15.68■□□□□ 0.1
LIMS2-210ENST00000413578 CHMP4AQ9BY43 222 aa15.68■□□□□ 0.1
LIMS2-210ENST00000413578 SCAF8Q9UPN6 1271 aaKnown RBP15.68■□□□□ 0.1
LIMS2-210ENST00000413578 ZNF646O15015 1829 aaPredicted RBP15.67■□□□□ 0.1
LIMS2-210ENST00000413578 CCT4P50991 539 aaKnown RBP15.67■□□□□ 0.1
LIMS2-210ENST00000413578 STRIP1Q5VSL9 837 aa15.67■□□□□ 0.1
LIMS2-210ENST00000413578 PRAMEF18Q5VWM3 479 aa15.67■□□□□ 0.1
LIMS2-210ENST00000413578 TXNRD3Q86VQ6 643 aa15.67■□□□□ 0.1
LIMS2-210ENST00000413578 MYO3BQ8WXR4 1341 aa15.67■□□□□ 0.1
LIMS2-210ENST00000413578 NEURL1BA8MQ27 555 aa15.66■□□□□ 0.1
LIMS2-210ENST00000413578 UBE2Q2LH0YL09 131 aa15.66■□□□□ 0.1
LIMS2-210ENST00000413578 H7C1W4 665 aa15.66■□□□□ 0.1
LIMS2-210ENST00000413578 SOX10P56693 466 aa15.66■□□□□ 0.1
LIMS2-210ENST00000413578 CWF19L2Q2TBE0 894 aaKnown RBP15.66■□□□□ 0.1
LIMS2-210ENST00000413578 ZBED3Q96IU2 234 aaPredicted RBP15.66■□□□□ 0.1
LIMS2-210ENST00000413578 PLA2G12BQ9BX93 195 aa15.66■□□□□ 0.1
LIMS2-210ENST00000413578 COA1Q9GZY4 146 aa15.66■□□□□ 0.1
LIMS2-210ENST00000413578 TM4SF4P48230 202 aa15.65■□□□□ 0.1
LIMS2-210ENST00000413578 MMP14P50281 582 aa15.65■□□□□ 0.1
LIMS2-210ENST00000413578 NOM1Q5C9Z4 860 aaKnown RBP15.65■□□□□ 0.1
LIMS2-210ENST00000413578 LEMD3Q9Y2U8 911 aa15.65■□□□□ 0.1
LIMS2-210ENST00000413578 KLRK1P26718 216 aa15.64■□□□□ 0.09
LIMS2-210ENST00000413578 CASP7P55210 303 aa15.64■□□□□ 0.09
LIMS2-210ENST00000413578 OGFOD1Q8N543 542 aa15.64■□□□□ 0.09
LIMS2-210ENST00000413578 ZNF296Q8WUU4 475 aaPredicted RBP15.64■□□□□ 0.09
LIMS2-210ENST00000413578 CFHR5Q9BXR6 569 aa15.64■□□□□ 0.09
LIMS2-210ENST00000413578 HPS5Q9UPZ3 1129 aa15.64■□□□□ 0.09
LIMS2-210ENST00000413578 IRS2Q9Y4H2 1338 aa15.64■□□□□ 0.09
LIMS2-210ENST00000413578 TBC1D8O95759 1140 aa15.63■□□□□ 0.09
LIMS2-210ENST00000413578 NEXNQ0ZGT2 675 aa15.63■□□□□ 0.09
LIMS2-210ENST00000413578 PKN2Q16513 984 aaKnown RBP15.63■□□□□ 0.09
LIMS2-210ENST00000413578 CCDC27Q2M243 656 aa15.63■□□□□ 0.09
LIMS2-210ENST00000413578 G2E3Q7L622 706 aa15.63■□□□□ 0.09
LIMS2-210ENST00000413578 UBE3BQ7Z3V4 1068 aa15.63■□□□□ 0.09
LIMS2-210ENST00000413578 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
LIMS2-210ENST00000413578 AKAP11Q9UKA4 1901 aa15.62■□□□□ 0.09
LIMS2-210ENST00000413578 SASH1O94885 1247 aa15.62■□□□□ 0.09
LIMS2-210ENST00000413578 CSF1RP07333 972 aa15.62■□□□□ 0.09
LIMS2-210ENST00000413578 LDLRAD1Q5T700 205 aa15.62■□□□□ 0.09
LIMS2-210ENST00000413578 ZNF804BA4D1E1 1349 aa15.62■□□□□ 0.09
LIMS2-210ENST00000413578 GPR25O00155 361 aa15.61■□□□□ 0.09
LIMS2-210ENST00000413578 ITGA6P23229 1130 aa15.61■□□□□ 0.09
LIMS2-210ENST00000413578 IGHMBP2P38935 993 aaKnown RBP15.61■□□□□ 0.09
LIMS2-210ENST00000413578 PTPN12Q05209 780 aaKnown RBP15.61■□□□□ 0.09
LIMS2-210ENST00000413578 GCKRQ14397 625 aa15.61■□□□□ 0.09
LIMS2-210ENST00000413578 TTLL5Q6EMB2 1281 aa15.61■□□□□ 0.09
LIMS2-210ENST00000413578 STK31Q9BXU1 1019 aa15.61■□□□□ 0.09
LIMS2-210ENST00000413578 NF2P35240 595 aa15.6■□□□□ 0.09
LIMS2-210ENST00000413578 TWISTNBQ3B726 338 aaPredicted RBP15.6■□□□□ 0.09
LIMS2-210ENST00000413578 APOBEC3FQ8IUX4 373 aaKnown RBP15.6■□□□□ 0.09
LIMS2-210ENST00000413578 KIAA0825Q8IV33 1275 aa15.6■□□□□ 0.09
LIMS2-210ENST00000413578 WWC1Q8IX03 1113 aa15.6■□□□□ 0.09
LIMS2-210ENST00000413578 ANKRD2Q9GZV1 360 aa15.6■□□□□ 0.09
LIMS2-210ENST00000413578 COL1A1P02452 1464 aaPredicted RBP15.59■□□□□ 0.09
LIMS2-210ENST00000413578 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
LIMS2-210ENST00000413578 FLIIQ13045 1269 aa15.59■□□□□ 0.09
LIMS2-210ENST00000413578 TTLL12Q14166 644 aaPredicted RBP15.59■□□□□ 0.09
LIMS2-210ENST00000413578 MAP3K11Q16584 847 aa15.59■□□□□ 0.09
LIMS2-210ENST00000413578 SPRYD7Q5W111 196 aa15.59■□□□□ 0.09
LIMS2-210ENST00000413578 C15orf52Q6ZUT6 534 aaKnown RBP15.59■□□□□ 0.09
LIMS2-210ENST00000413578 CERS5Q8N5B7 392 aa15.59■□□□□ 0.09
LIMS2-210ENST00000413578 FBXW7Q969H0 707 aa15.59■□□□□ 0.09
LIMS2-210ENST00000413578 R3HDMLQ9H3Y0 253 aa15.59■□□□□ 0.09
LIMS2-210ENST00000413578 PCDH10Q9P2E7 1040 aa15.59■□□□□ 0.09
LIMS2-210ENST00000413578 HDAC9Q9UKV0 1011 aa15.59■□□□□ 0.09
LIMS2-210ENST00000413578 SSC5DA1L4H1 1573 aa15.58■□□□□ 0.09
LIMS2-210ENST00000413578 GTF2IP78347 998 aa15.58■□□□□ 0.08
LIMS2-210ENST00000413578 CHRNDQ07001 517 aa15.58■□□□□ 0.08
LIMS2-210ENST00000413578 SREBF2Q12772 1141 aa15.58■□□□□ 0.08
LIMS2-210ENST00000413578 PRPF38BQ5VTL8 546 aaKnown RBP15.58■□□□□ 0.08
LIMS2-210ENST00000413578 ARMC9Q7Z3E5 817 aa15.58■□□□□ 0.08
LIMS2-210ENST00000413578 MTMR14Q8NCE2 650 aa15.58■□□□□ 0.08
LIMS2-210ENST00000413578 CD209Q9NNX6 404 aa15.58■□□□□ 0.08
LIMS2-210ENST00000413578 IL16Q14005 1332 aa15.58■□□□□ 0.08
LIMS2-210ENST00000413578 MYH3P11055 1940 aa15.57■□□□□ 0.08
LIMS2-210ENST00000413578 SNAP23O00161 211 aa15.57■□□□□ 0.08
LIMS2-210ENST00000413578 MKRN3Q13064 507 aaKnown RBP15.57■□□□□ 0.08
LIMS2-210ENST00000413578 CCDC184Q52MB2 194 aa15.57■□□□□ 0.08
LIMS2-210ENST00000413578 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
LIMS2-210ENST00000413578 FBXO46Q6PJ61 603 aaPredicted RBP15.57■□□□□ 0.08
LIMS2-210ENST00000413578 LINS1Q8NG48 757 aa15.57■□□□□ 0.08
LIMS2-210ENST00000413578 DNAAF4Q8WXU2 420 aa15.57■□□□□ 0.08
LIMS2-210ENST00000413578 MPHOSPH8Q99549 860 aa15.57■□□□□ 0.08
LIMS2-210ENST00000413578 DEFB129Q9H1M3 183 aa15.56■□□□□ 0.08
LIMS2-210ENST00000413578 FZD1Q9UP38 647 aa15.56■□□□□ 0.08
LIMS2-210ENST00000413578 SPEF2Q9C093 1822 aa15.56■□□□□ 0.08
LIMS2-210ENST00000413578 FKTNO75072 461 aa15.55■□□□□ 0.08
LIMS2-210ENST00000413578 IL1R1P14778 569 aa15.55■□□□□ 0.08
LIMS2-210ENST00000413578 PRKG1Q13976 671 aa15.55■□□□□ 0.08
LIMS2-210ENST00000413578 MYH16Q9H6N6 1097 aa15.55■□□□□ 0.08
LIMS2-210ENST00000413578 ANGEL1Q9UNK9 670 aaKnown RBP15.55■□□□□ 0.08
LIMS2-210ENST00000413578 PCDHAC2Q9Y5I4 1007 aa15.55■□□□□ 0.08
LIMS2-210ENST00000413578 PPP2R3BQ9Y5P8 575 aa15.55■□□□□ 0.08
LIMS2-210ENST00000413578 ALDH1A1P00352 501 aa15.54■□□□□ 0.08
LIMS2-210ENST00000413578 FKBP1AP62942 108 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms