RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 DUOX1Q9NRD9 1551 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 HDAC9Q9UKV0 1011 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 CHMP3Q9Y3E7 222 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 RIPOR2Q9Y4F9 1068 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 ADAMTSL1Q8N6G6 1762 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 PASKQ96RG2 1323 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 PSMD14O00487 310 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 USP17L8P0C7I0 530 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 ZNF280AP59817 542 aaPredicted RBP7.98□□□□□ -1.13
USP54-202ENST00000413442 MTX1Q13505 466 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 EAPPQ56P03 285 aaPredicted RBP7.98□□□□□ -1.13
USP54-202ENST00000413442 DCPSQ96C86 337 aaKnown RBP7.98□□□□□ -1.13
USP54-202ENST00000413442 KAZALD1Q96I82 304 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 SUCLG2Q96I99 432 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 CCDC85AQ96PX6 553 aaPredicted RBP7.98□□□□□ -1.13
USP54-202ENST00000413442 GMLQ99445 158 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 BICC1Q9H694 974 aaKnown RBP7.98□□□□□ -1.13
USP54-202ENST00000413442 DBNDD1Q9H9R9 158 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 CD209Q9NNX6 404 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 SUGT1Q9Y2Z0 365 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 PITPNM2Q9BZ72 1349 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 TRPM7Q96QT4 1865 aa7.98□□□□□ -1.13
USP54-202ENST00000413442 IFIT1P09914 478 aaKnown RBP7.97□□□□□ -1.13
USP54-202ENST00000413442 HIBADHP31937 336 aaKnown RBP7.97□□□□□ -1.13
USP54-202ENST00000413442 IL15P40933 162 aaPredicted RBP7.97□□□□□ -1.13
USP54-202ENST00000413442 HDLBPQ00341 1268 aaKnown RBP7.97□□□□□ -1.13
USP54-202ENST00000413442 DOK7Q18PE1 504 aa7.97□□□□□ -1.13
USP54-202ENST00000413442 EPHA10Q5JZY3 1008 aa7.97□□□□□ -1.13
USP54-202ENST00000413442 JMYQ8N9B5 988 aa7.97□□□□□ -1.13
USP54-202ENST00000413442 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.97□□□□□ -1.13
USP54-202ENST00000413442 MTMR14Q8NCE2 650 aa7.97□□□□□ -1.13
USP54-202ENST00000413442 TBC1D22AQ8WUA7 517 aa7.97□□□□□ -1.13
USP54-202ENST00000413442 KLRG1Q96E93 195 aa7.97□□□□□ -1.13
USP54-202ENST00000413442 COPRSQ9NQ92 184 aa7.97□□□□□ -1.13
USP54-202ENST00000413442 AKAP2Q9Y2D5 859 aa7.97□□□□□ -1.13
USP54-202ENST00000413442 FAM205AQ6ZU69 1335 aa7.97□□□□□ -1.13
USP54-202ENST00000413442 SPEF2Q9C093 1822 aa7.96□□□□□ -1.13
USP54-202ENST00000413442 COL4A5P29400 1685 aa7.96□□□□□ -1.13
USP54-202ENST00000413442 UNCXA6NJT0 531 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 EYA2O00167 538 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 SEMA3EO15041 775 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 GNAI2P04899 355 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 TRIM27P14373 513 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 ECE1P42892 770 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 FKBP1BP68106 108 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 DEFB115Q30KQ5 88 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 DACT2Q5SW24 774 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 MICALL2Q8IY33 904 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 REM2Q8IYK8 340 aaPredicted RBP7.96□□□□□ -1.14
USP54-202ENST00000413442 DZIP1LQ8IYY4 767 aaKnown RBP7.96□□□□□ -1.14
USP54-202ENST00000413442 ANKRD44Q8N8A2 993 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 TDRD7Q8NHU6 1098 aaKnown RBP7.96□□□□□ -1.14
USP54-202ENST00000413442 GNL3LQ9NVN8 582 aaKnown RBP7.96□□□□□ -1.14
USP54-202ENST00000413442 CEP126Q9P2H0 1117 aa7.96□□□□□ -1.14
USP54-202ENST00000413442 MYO1BO43795 1136 aa7.95□□□□□ -1.14
USP54-202ENST00000413442 HOXD11P31277 338 aaPredicted RBP7.95□□□□□ -1.14
USP54-202ENST00000413442 PTPN12Q05209 780 aaKnown RBP7.95□□□□□ -1.14
USP54-202ENST00000413442 PUM3Q15397 648 aaKnown RBP7.95□□□□□ -1.14
USP54-202ENST00000413442 METTL24Q5JXM2 366 aa7.95□□□□□ -1.14
USP54-202ENST00000413442 PPP4R3CPQ6ZMV5 832 aa7.95□□□□□ -1.14
USP54-202ENST00000413442 FBXO33Q7Z6M2 555 aa7.95□□□□□ -1.14
USP54-202ENST00000413442 VPS37DQ86XT2 251 aa7.95□□□□□ -1.14
USP54-202ENST00000413442 SULF1Q8IWU6 871 aa7.95□□□□□ -1.14
USP54-202ENST00000413442 LPIN2Q92539 896 aa7.95□□□□□ -1.14
USP54-202ENST00000413442 FRAT1Q92837 279 aaPredicted RBP7.95□□□□□ -1.14
USP54-202ENST00000413442 MYOZ2Q9NPC6 264 aa7.95□□□□□ -1.14
USP54-202ENST00000413442 IRS2Q9Y4H2 1338 aa7.95□□□□□ -1.14
USP54-202ENST00000413442 POLR2AP24928 1970 aaKnown RBP7.94□□□□□ -1.14
USP54-202ENST00000413442 SCN9AQ15858 1988 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 RASSF10A6NK89 507 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 TAF5LO75529 589 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 BCAR3O75815 825 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 SLC5A1P13866 664 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 MAP2K2P36507 400 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 RFX5P48382 616 aaPredicted RBP7.94□□□□□ -1.14
USP54-202ENST00000413442 HIRAP54198 1017 aaPredicted RBP7.94□□□□□ -1.14
USP54-202ENST00000413442 GTF2IP78347 998 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 PDE3AQ14432 1141 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 KIF4BQ2VIQ3 1234 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 MAP1SQ66K74 1059 aaPredicted RBP7.94□□□□□ -1.14
USP54-202ENST00000413442 TMED8Q6PL24 325 aaPredicted RBP7.94□□□□□ -1.14
USP54-202ENST00000413442 FTSJ3Q8IY81 847 aaKnown RBP7.94□□□□□ -1.14
USP54-202ENST00000413442 C2orf69Q8N8R5 385 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 WDR66Q8TBY9 1149 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 FAM84BQ96KN1 310 aaPredicted RBP7.94□□□□□ -1.14
USP54-202ENST00000413442 GPR108Q9NPR9 543 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 ZBTB12Q9Y330 459 aaPredicted RBP7.94□□□□□ -1.14
USP54-202ENST00000413442 PPP2R3BQ9Y5P8 575 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 MAST3O60307 1309 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 A0A1B0GUL6 1792 aa7.94□□□□□ -1.14
USP54-202ENST00000413442 ZBTB7BO15156 539 aaPredicted RBP7.93□□□□□ -1.14
USP54-202ENST00000413442 PLIN1O60240 522 aa7.93□□□□□ -1.14
USP54-202ENST00000413442 FRAT2O75474 233 aaPredicted RBP7.93□□□□□ -1.14
USP54-202ENST00000413442 FGFR2P21802 821 aa7.93□□□□□ -1.14
USP54-202ENST00000413442 NF2P35240 595 aa7.93□□□□□ -1.14
USP54-202ENST00000413442 ATP8B2P98198 1209 aa7.93□□□□□ -1.14
USP54-202ENST00000413442 MAP2K1Q02750 393 aaPredicted RBP7.93□□□□□ -1.14
USP54-202ENST00000413442 DLGAP5Q15398 846 aa7.93□□□□□ -1.14
USP54-202ENST00000413442 HSP90AB4PQ58FF6 505 aa7.93□□□□□ -1.14
USP54-202ENST00000413442 TXNRD3Q86VQ6 643 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms