RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 PDIA4P13667 645 aaKnown RBP24.86■■□□□ 1.57
SLC13A3-204ENST00000413164 SCARF1Q14162 830 aa24.86■■□□□ 1.57
SLC13A3-204ENST00000413164 GORABQ5T7V8 394 aa24.86■■□□□ 1.57
SLC13A3-204ENST00000413164 USP48Q86UV5 1035 aa24.86■■□□□ 1.57
SLC13A3-204ENST00000413164 LAMA4Q16363 1823 aa24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 FKBP4Q02790 459 aaKnown RBP eCLIP24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 ATP2B3Q16720 1220 aa24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 FOXD4L6Q3SYB3 417 aaPredicted RBP24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 FOXD4L3Q6VB84 417 aaPredicted RBP24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 STOX1Q6ZVD7 989 aa24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 AK7Q96M32 723 aa24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 GDPD2Q9HCC8 539 aa24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 ATP6V1DQ9Y5K8 247 aa24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 CRKLP46109 303 aaKnown RBP24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 METTL24Q5JXM2 366 aa24.85■■□□□ 1.57
SLC13A3-204ENST00000413164 LOC102724428A0A0B4J2F2 783 aa24.84■■□□□ 1.57
SLC13A3-204ENST00000413164 SIK1P57059 783 aa24.84■■□□□ 1.57
SLC13A3-204ENST00000413164 FAM196AQ6ZSG2 479 aa24.84■■□□□ 1.57
SLC13A3-204ENST00000413164 ZNF512BQ96KM6 892 aaPredicted RBP24.84■■□□□ 1.57
SLC13A3-204ENST00000413164 AKAP11Q9UKA4 1901 aa24.84■■□□□ 1.57
SLC13A3-204ENST00000413164 ZFYP08048 801 aaPredicted RBP24.83■■□□□ 1.57
SLC13A3-204ENST00000413164 ATP6V1AP38606 617 aa24.83■■□□□ 1.57
SLC13A3-204ENST00000413164 LRRFIP1Q32MZ4 808 aaKnown RBP24.83■■□□□ 1.57
SLC13A3-204ENST00000413164 PTF1AQ7RTS3 328 aa24.83■■□□□ 1.57
SLC13A3-204ENST00000413164 OSBP2Q969R2 916 aa24.83■■□□□ 1.57
SLC13A3-204ENST00000413164 MYH14Q7Z406 1995 aaKnown RBP24.83■■□□□ 1.56
SLC13A3-204ENST00000413164 M0R2C6 588 aa24.83■■□□□ 1.56
SLC13A3-204ENST00000413164 DTNBO60941 627 aa24.83■■□□□ 1.56
SLC13A3-204ENST00000413164 GADD45BO75293 160 aaPredicted RBP24.83■■□□□ 1.56
SLC13A3-204ENST00000413164 HMGB1P09429 215 aaKnown RBP24.83■■□□□ 1.56
SLC13A3-204ENST00000413164 CNPY2Q9Y2B0 182 aa24.83■■□□□ 1.56
SLC13A3-204ENST00000413164 ITPK1Q13572 414 aa24.82■■□□□ 1.56
SLC13A3-204ENST00000413164 SMARCC1Q92922 1105 aaPredicted RBP24.82■■□□□ 1.56
SLC13A3-204ENST00000413164 ZAP70P43403 619 aa24.81■■□□□ 1.56
SLC13A3-204ENST00000413164 FAM43AQ8N2R8 423 aa24.81■■□□□ 1.56
SLC13A3-204ENST00000413164 RTN4Q9NQC3 1192 aaKnown RBP24.81■■□□□ 1.56
SLC13A3-204ENST00000413164 CNNM1Q9NRU3 951 aa24.81■■□□□ 1.56
SLC13A3-204ENST00000413164 SBF2Q86WG5 1849 aa24.81■■□□□ 1.56
SLC13A3-204ENST00000413164 PDE8BO95263 885 aa24.81■■□□□ 1.56
SLC13A3-204ENST00000413164 Q6ZUG5 572 aa24.81■■□□□ 1.56
SLC13A3-204ENST00000413164 MYH7P12883 1935 aa24.8■■□□□ 1.56
SLC13A3-204ENST00000413164 NHSQ6T4R5 1651 aa24.8■■□□□ 1.56
SLC13A3-204ENST00000413164 CAMTA2O94983 1202 aa24.8■■□□□ 1.56
SLC13A3-204ENST00000413164 PDCP20941 246 aa24.8■■□□□ 1.56
SLC13A3-204ENST00000413164 SUSD4Q5VX71 490 aa24.8■■□□□ 1.56
SLC13A3-204ENST00000413164 GTF3C6Q969F1 213 aa24.8■■□□□ 1.56
SLC13A3-204ENST00000413164 FOXP2O15409 715 aa24.79■■□□□ 1.56
SLC13A3-204ENST00000413164 MCAMP43121 646 aa24.79■■□□□ 1.56
SLC13A3-204ENST00000413164 NASPP49321 788 aaPredicted RBP24.79■■□□□ 1.56
SLC13A3-204ENST00000413164 LARP1BQ659C4 914 aaKnown RBP24.79■■□□□ 1.56
SLC13A3-204ENST00000413164 LRSAM1Q6UWE0 723 aa24.79■■□□□ 1.56
SLC13A3-204ENST00000413164 DHX32Q7L7V1 743 aaKnown RBP24.79■■□□□ 1.56
SLC13A3-204ENST00000413164 AGXT2Q9BYV1 514 aa24.79■■□□□ 1.56
SLC13A3-204ENST00000413164 EXOSC10Q01780 885 aaKnown RBP24.79■■□□□ 1.56
SLC13A3-204ENST00000413164 PI16Q6UXB8 463 aa24.79■■□□□ 1.56
SLC13A3-204ENST00000413164 ZNF831Q5JPB2 1677 aa24.78■■□□□ 1.56
SLC13A3-204ENST00000413164 COL5A3P25940 1745 aaPredicted RBP24.78■■□□□ 1.56
SLC13A3-204ENST00000413164 ARAP2Q8WZ64 1704 aa24.78■■□□□ 1.56
SLC13A3-204ENST00000413164 A0A0G2JLW4 131 aa24.78■■□□□ 1.56
SLC13A3-204ENST00000413164 SYCE3A1L190 88 aa24.78■■□□□ 1.56
SLC13A3-204ENST00000413164 APPBP2Q92624 585 aa24.78■■□□□ 1.56
SLC13A3-204ENST00000413164 BTAF1O14981 1849 aa24.77■■□□□ 1.56
SLC13A3-204ENST00000413164 E7EWF7 191 aa24.77■■□□□ 1.56
SLC13A3-204ENST00000413164 DDX60Q8IY21 1712 aaKnown RBP24.77■■□□□ 1.56
SLC13A3-204ENST00000413164 VPS37CA5D8V6 355 aaPredicted RBP24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 STK3Q13188 491 aa24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 PARP10Q53GL7 1025 aa24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 SYAP1Q96A49 352 aaPredicted RBP24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 BCL11BQ9C0K0 894 aaPredicted RBP24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 RBSNQ9H1K0 784 aa24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 TRIM37O94972 964 aa24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 FGFR2P21802 821 aa24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 UBE2HP62256 183 aa24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 DNM1Q05193 864 aaKnown RBP24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 BRF1Q92994 677 aa24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 UTP14AQ9BVJ6 771 aaKnown RBP24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 MROH5Q6ZUA9 1318 aa24.76■■□□□ 1.55
SLC13A3-204ENST00000413164 CDC37L1Q7L3B6 337 aa24.75■■□□□ 1.55
SLC13A3-204ENST00000413164 EP400Q96L91 3159 aa24.75■■□□□ 1.55
SLC13A3-204ENST00000413164 ARID4AP29374 1257 aaPredicted RBP24.74■■□□□ 1.55
SLC13A3-204ENST00000413164 WASHC4Q2M389 1173 aa24.74■■□□□ 1.55
SLC13A3-204ENST00000413164 PUS7LQ9H0K6 701 aaKnown RBP24.74■■□□□ 1.55
SLC13A3-204ENST00000413164 LAMB2P55268 1798 aa24.74■■□□□ 1.55
SLC13A3-204ENST00000413164 HCLS1P14317 486 aaPredicted RBP24.74■■□□□ 1.55
SLC13A3-204ENST00000413164 PUM3Q15397 648 aaKnown RBP24.74■■□□□ 1.55
SLC13A3-204ENST00000413164 TTLL5Q6EMB2 1281 aa24.74■■□□□ 1.55
SLC13A3-204ENST00000413164 FBXL16Q8N461 479 aa24.74■■□□□ 1.55
SLC13A3-204ENST00000413164 LRRC2Q9BYS8 371 aa24.74■■□□□ 1.55
SLC13A3-204ENST00000413164 PFKFB2O60825 505 aa24.73■■□□□ 1.55
SLC13A3-204ENST00000413164 LPIN2Q92539 896 aa24.73■■□□□ 1.55
SLC13A3-204ENST00000413164 PPP1R9BQ96SB3 815 aa24.73■■□□□ 1.55
SLC13A3-204ENST00000413164 CTNNA3Q9UI47 895 aa24.73■■□□□ 1.55
SLC13A3-204ENST00000413164 FIBPO43427 364 aa24.73■■□□□ 1.55
SLC13A3-204ENST00000413164 CCDC102BQ68D86 513 aa24.73■■□□□ 1.55
SLC13A3-204ENST00000413164 BCORQ6W2J9 1755 aa24.73■■□□□ 1.55
SLC13A3-204ENST00000413164 RTL9Q8NET4 1388 aa24.73■■□□□ 1.55
SLC13A3-204ENST00000413164 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.73■■□□□ 1.55
SLC13A3-204ENST00000413164 NTSR2O95665 410 aa24.72■■□□□ 1.55
SLC13A3-204ENST00000413164 ADD2P35612 726 aa24.72■■□□□ 1.55
SLC13A3-204ENST00000413164 SCRN1Q12765 414 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms