RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 PNMA6EA0A0J9YXQ4 647 aa17.44■□□□□ 0.38
GYPC-203ENST00000409836 TAF5LO75529 589 aa17.44■□□□□ 0.38
GYPC-203ENST00000409836 RPS12P25398 132 aaKnown RBP17.44■□□□□ 0.38
GYPC-203ENST00000409836 IL15P40933 162 aaPredicted RBP17.44■□□□□ 0.38
GYPC-203ENST00000409836 TNIP1Q15025 636 aa17.44■□□□□ 0.38
GYPC-203ENST00000409836 RIMBP2O15034 1052 aa17.43■□□□□ 0.38
GYPC-203ENST00000409836 VIL1P09327 827 aaKnown RBP17.43■□□□□ 0.38
GYPC-203ENST00000409836 IL1R1P14778 569 aa17.43■□□□□ 0.38
GYPC-203ENST00000409836 ATP8B2P98198 1209 aa17.43■□□□□ 0.38
GYPC-203ENST00000409836 PUM3Q15397 648 aaKnown RBP17.43■□□□□ 0.38
GYPC-203ENST00000409836 C20orf194Q5TEA3 1177 aa17.43■□□□□ 0.38
GYPC-203ENST00000409836 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
GYPC-203ENST00000409836 HELBQ8NG08 1087 aaPredicted RBP17.43■□□□□ 0.38
GYPC-203ENST00000409836 DPF2Q92785 391 aa17.43■□□□□ 0.38
GYPC-203ENST00000409836 GPRC5DQ9NZD1 345 aa17.43■□□□□ 0.38
GYPC-203ENST00000409836 TOMM70O94826 608 aa17.42■□□□□ 0.38
GYPC-203ENST00000409836 KCNJ4P48050 445 aa17.42■□□□□ 0.38
GYPC-203ENST00000409836 METTL24Q5JXM2 366 aa17.42■□□□□ 0.38
GYPC-203ENST00000409836 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
GYPC-203ENST00000409836 GMLQ99445 158 aa17.42■□□□□ 0.38
GYPC-203ENST00000409836 TAF1DQ9H5J8 278 aaPredicted RBP17.42■□□□□ 0.38
GYPC-203ENST00000409836 HACL1Q9UJ83 578 aa17.42■□□□□ 0.38
GYPC-203ENST00000409836 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
GYPC-203ENST00000409836 SNAP23O00161 211 aa17.41■□□□□ 0.38
GYPC-203ENST00000409836 PSMD14O00487 310 aa17.41■□□□□ 0.38
GYPC-203ENST00000409836 DOK7Q18PE1 504 aa17.41■□□□□ 0.38
GYPC-203ENST00000409836 STRIP1Q5VSL9 837 aa17.41■□□□□ 0.38
GYPC-203ENST00000409836 ZNF804AQ7Z570 1209 aa17.41■□□□□ 0.38
GYPC-203ENST00000409836 RRAGCQ9HB90 399 aa17.41■□□□□ 0.38
GYPC-203ENST00000409836 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
GYPC-203ENST00000409836 NOP58Q9Y2X3 529 aaKnown RBP17.41■□□□□ 0.38
GYPC-203ENST00000409836 ECM29Q5VYK3 1845 aa17.41■□□□□ 0.38
GYPC-203ENST00000409836 MYO3BQ8WXR4 1341 aa17.41■□□□□ 0.38
GYPC-203ENST00000409836 RAD17O75943 681 aa17.4■□□□□ 0.38
GYPC-203ENST00000409836 GMPSP49915 693 aaPredicted RBP17.4■□□□□ 0.38
GYPC-203ENST00000409836 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
GYPC-203ENST00000409836 CD209Q9NNX6 404 aa17.4■□□□□ 0.38
GYPC-203ENST00000409836 USP17L3A6NCW0 530 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 USP17L4A6NCW7 530 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 MMP14P50281 582 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 FKBP1AP62942 108 aaKnown RBP17.39■□□□□ 0.37
GYPC-203ENST00000409836 DACT2Q5SW24 774 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 RSBN1LQ6PCB5 846 aaPredicted RBP17.39■□□□□ 0.37
GYPC-203ENST00000409836 USP17L1Q7RTZ2 530 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 FBXO33Q7Z6M2 555 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 PNMA8AQ86V59 439 aaPredicted RBP17.39■□□□□ 0.37
GYPC-203ENST00000409836 LPIN2Q92539 896 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 KCNQ5Q9NR82 932 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 FAM205AQ6ZU69 1335 aa17.39■□□□□ 0.37
GYPC-203ENST00000409836 EPHX2P34913 555 aa17.38■□□□□ 0.37
GYPC-203ENST00000409836 FSTL1Q12841 308 aa17.38■□□□□ 0.37
GYPC-203ENST00000409836 RPAP2Q8IXW5 612 aaPredicted RBP17.38■□□□□ 0.37
GYPC-203ENST00000409836 TDRD7Q8NHU6 1098 aaKnown RBP17.38■□□□□ 0.37
GYPC-203ENST00000409836 FAM84BQ96KN1 310 aaPredicted RBP17.38■□□□□ 0.37
GYPC-203ENST00000409836 SIL1Q9H173 461 aa17.38■□□□□ 0.37
GYPC-203ENST00000409836 GJA3Q9Y6H8 435 aa17.38■□□□□ 0.37
GYPC-203ENST00000409836 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
GYPC-203ENST00000409836 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
GYPC-203ENST00000409836 USP50Q70EL3 339 aaPredicted RBP17.37■□□□□ 0.37
GYPC-203ENST00000409836 LDHDQ86WU2 507 aa17.37■□□□□ 0.37
GYPC-203ENST00000409836 ADARB2Q9NS39 739 aaKnown RBP17.37■□□□□ 0.37
GYPC-203ENST00000409836 CEP126Q9P2H0 1117 aa17.37■□□□□ 0.37
GYPC-203ENST00000409836 COL1A1P02452 1464 aaPredicted RBP17.37■□□□□ 0.37
GYPC-203ENST00000409836 G3V3G9 751 aa17.36■□□□□ 0.37
GYPC-203ENST00000409836 IFIT1P09914 478 aaKnown RBP17.36■□□□□ 0.37
GYPC-203ENST00000409836 SLC5A1P13866 664 aa17.36■□□□□ 0.37
GYPC-203ENST00000409836 EPS15P42566 896 aa17.36■□□□□ 0.37
GYPC-203ENST00000409836 C1QTNF8P60827 252 aa17.36■□□□□ 0.37
GYPC-203ENST00000409836 ATP2B3Q16720 1220 aa17.36■□□□□ 0.37
GYPC-203ENST00000409836 DCAF8Q5TAQ9 597 aa17.36■□□□□ 0.37
GYPC-203ENST00000409836 SIRT2Q8IXJ6 389 aa17.36■□□□□ 0.37
GYPC-203ENST00000409836 SMC1BQ8NDV3 1235 aa17.36■□□□□ 0.37
GYPC-203ENST00000409836 GPR108Q9NPR9 543 aa17.36■□□□□ 0.37
GYPC-203ENST00000409836 SASH1O94885 1247 aa17.35■□□□□ 0.37
GYPC-203ENST00000409836 HIBADHP31937 336 aaKnown RBP17.35■□□□□ 0.37
GYPC-203ENST00000409836 PGAP2Q9UHJ9 254 aa17.35■□□□□ 0.37
GYPC-203ENST00000409836 PDS5AQ29RF7 1337 aaKnown RBP17.35■□□□□ 0.37
GYPC-203ENST00000409836 GYG1P46976 350 aa17.34■□□□□ 0.37
GYPC-203ENST00000409836 MICALL2Q8IY33 904 aa17.34■□□□□ 0.37
GYPC-203ENST00000409836 C16orf71Q8IYS4 520 aaPredicted RBP17.34■□□□□ 0.37
GYPC-203ENST00000409836 TRPM7Q96QT4 1865 aa17.34■□□□□ 0.37
GYPC-203ENST00000409836 AKAP11Q9UKA4 1901 aa17.34■□□□□ 0.37
GYPC-203ENST00000409836 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
GYPC-203ENST00000409836 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
GYPC-203ENST00000409836 HMMRO75330 724 aa17.33■□□□□ 0.36
GYPC-203ENST00000409836 POTEIP0CG38 1075 aa17.33■□□□□ 0.36
GYPC-203ENST00000409836 POTEJP0CG39 1038 aa17.33■□□□□ 0.36
GYPC-203ENST00000409836 AAMPQ13685 434 aa17.33■□□□□ 0.36
GYPC-203ENST00000409836 CAVIN4Q5BKX8 364 aa17.33■□□□□ 0.36
GYPC-203ENST00000409836 TTLL5Q6EMB2 1281 aa17.33■□□□□ 0.36
GYPC-203ENST00000409836 ZC3H15Q8WU90 426 aaKnown RBP17.33■□□□□ 0.36
GYPC-203ENST00000409836 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
GYPC-203ENST00000409836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.33■□□□□ 0.36
GYPC-203ENST00000409836 SEMA3EO15041 775 aa17.32■□□□□ 0.36
GYPC-203ENST00000409836 TFCP2Q12800 502 aa17.32■□□□□ 0.36
GYPC-203ENST00000409836 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.36
GYPC-203ENST00000409836 CHADLQ6NUI6 762 aa17.32■□□□□ 0.36
GYPC-203ENST00000409836 CERS5Q8N5B7 392 aa17.32■□□□□ 0.36
GYPC-203ENST00000409836 MAST2Q6P0Q8 1798 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms