RNA–Protein interactions for RNA: ENST00000407122.5

CLHC1-204, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLHC1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-204ENST00000407122 HDAC9Q9UKV0 1011 aa8.68□□□□□ -1.02
CLHC1-204ENST00000407122 PITPNM2Q9BZ72 1349 aa8.67□□□□□ -1.02
CLHC1-204ENST00000407122 USP17L8P0C7I0 530 aa8.67□□□□□ -1.02
CLHC1-204ENST00000407122 TRIM28Q13263 835 aaKnown RBP8.67□□□□□ -1.02
CLHC1-204ENST00000407122 CCDC146Q8IYE0 955 aa8.67□□□□□ -1.02
CLHC1-204ENST00000407122 CCDC85AQ96PX6 553 aaPredicted RBP8.67□□□□□ -1.02
CLHC1-204ENST00000407122 TRIM35Q9UPQ4 493 aa8.67□□□□□ -1.02
CLHC1-204ENST00000407122 WTIPA6NIX2 430 aaPredicted RBP8.66□□□□□ -1.02
CLHC1-204ENST00000407122 MKRN3Q13064 507 aaKnown RBP8.66□□□□□ -1.02
CLHC1-204ENST00000407122 PKN2Q16513 984 aaKnown RBP8.66□□□□□ -1.02
CLHC1-204ENST00000407122 NBPF9Q3BBW0 867 aa8.66□□□□□ -1.02
CLHC1-204ENST00000407122 PIP4P2Q8N4L2 257 aa8.66□□□□□ -1.02
CLHC1-204ENST00000407122 HOXB7P09629 217 aa8.66□□□□□ -1.02
CLHC1-204ENST00000407122 ZBTB38Q8NAP3 1195 aaPredicted RBP8.66□□□□□ -1.02
CLHC1-204ENST00000407122 JARID2Q92833 1246 aaPredicted RBP8.66□□□□□ -1.02
CLHC1-204ENST00000407122 R3HDMLQ9H3Y0 253 aa8.66□□□□□ -1.02
CLHC1-204ENST00000407122 RTN4Q9NQC3 1192 aaKnown RBP8.66□□□□□ -1.02
CLHC1-204ENST00000407122 HYPKQ9NX55 129 aa8.66□□□□□ -1.02
CLHC1-204ENST00000407122 MYH3P11055 1940 aa8.66□□□□□ -1.02
CLHC1-204ENST00000407122 GPR25O00155 361 aa8.65□□□□□ -1.02
CLHC1-204ENST00000407122 TM4SF4P48230 202 aa8.65□□□□□ -1.02
CLHC1-204ENST00000407122 MXD3Q9BW11 206 aa8.65□□□□□ -1.02
CLHC1-204ENST00000407122 PHAXQ9H814 394 aaKnown RBP8.65□□□□□ -1.02
CLHC1-204ENST00000407122 XDHP47989 1333 aa8.65□□□□□ -1.02
CLHC1-204ENST00000407122 USP17L3A6NCW0 530 aa8.65□□□□□ -1.03
CLHC1-204ENST00000407122 USP17L4A6NCW7 530 aa8.65□□□□□ -1.03
CLHC1-204ENST00000407122 TTLL12Q14166 644 aaPredicted RBP8.65□□□□□ -1.03
CLHC1-204ENST00000407122 CCDC152Q4G0S7 254 aa8.65□□□□□ -1.03
CLHC1-204ENST00000407122 DUSP27Q5VZP5 1158 aa8.65□□□□□ -1.03
CLHC1-204ENST00000407122 FBXO46Q6PJ61 603 aaPredicted RBP8.65□□□□□ -1.03
CLHC1-204ENST00000407122 USP17L1Q7RTZ2 530 aa8.65□□□□□ -1.03
CLHC1-204ENST00000407122 RIC3Q7Z5B4 369 aa8.65□□□□□ -1.03
CLHC1-204ENST00000407122 PODNQ7Z5L7 613 aa8.65□□□□□ -1.03
CLHC1-204ENST00000407122 MYD88Q99836 296 aa8.65□□□□□ -1.03
CLHC1-204ENST00000407122 WNT10BO00744 389 aa8.64□□□□□ -1.03
CLHC1-204ENST00000407122 PDE8AO60658 829 aa8.64□□□□□ -1.03
CLHC1-204ENST00000407122 NOM1Q5C9Z4 860 aaKnown RBP8.64□□□□□ -1.03
CLHC1-204ENST00000407122 SASH1O94885 1247 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 PCCAP05165 728 aaPredicted RBP8.63□□□□□ -1.03
CLHC1-204ENST00000407122 ATP2B4P23634 1241 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 GOLGA2Q08379 1002 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 PRKG1Q13976 671 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 DACT2Q5SW24 774 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 ANKRD18AQ8IVF6 992 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 MBIPQ9NS73 344 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 LAMB1P07942 1786 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 MED23Q9ULK4 1368 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 RBBP6Q7Z6E9 1792 aaKnown RBP8.63□□□□□ -1.03
CLHC1-204ENST00000407122 FKTNO75072 461 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 PRKAR2AP13861 404 aaKnown RBP8.63□□□□□ -1.03
CLHC1-204ENST00000407122 PTPN12Q05209 780 aaKnown RBP8.63□□□□□ -1.03
CLHC1-204ENST00000407122 CCDC191Q8NCU4 936 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 CFHR5Q9BXR6 569 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 FZD1Q9UP38 647 aa8.63□□□□□ -1.03
CLHC1-204ENST00000407122 SREBF2Q12772 1141 aa8.62□□□□□ -1.03
CLHC1-204ENST00000407122 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
CLHC1-204ENST00000407122 RUNDC1Q96C34 613 aa8.62□□□□□ -1.03
CLHC1-204ENST00000407122 CWC25Q9NXE8 425 aaPredicted RBP8.62□□□□□ -1.03
CLHC1-204ENST00000407122 SZT2Q5T011 3432 aa8.62□□□□□ -1.03
CLHC1-204ENST00000407122 ECM29Q5VYK3 1845 aa8.62□□□□□ -1.03
CLHC1-204ENST00000407122 ELL2O00472 640 aaPredicted RBP8.62□□□□□ -1.03
CLHC1-204ENST00000407122 HSP90B1P14625 803 aaKnown RBP8.62□□□□□ -1.03
CLHC1-204ENST00000407122 NF2P35240 595 aa8.62□□□□□ -1.03
CLHC1-204ENST00000407122 TXNRD3Q86VQ6 643 aa8.62□□□□□ -1.03
CLHC1-204ENST00000407122 OGFOD1Q8N543 542 aa8.62□□□□□ -1.03
CLHC1-204ENST00000407122 MINPP1Q9UNW1 487 aa8.62□□□□□ -1.03
CLHC1-204ENST00000407122 KIAA0100Q14667 2235 aaKnown RBP8.61□□□□□ -1.03
CLHC1-204ENST00000407122 POTEFA5A3E0 1075 aa8.61□□□□□ -1.03
CLHC1-204ENST00000407122 CCT4P50991 539 aaKnown RBP8.61□□□□□ -1.03
CLHC1-204ENST00000407122 RALBP1Q15311 655 aa8.61□□□□□ -1.03
CLHC1-204ENST00000407122 LDLRAD1Q5T700 205 aa8.61□□□□□ -1.03
CLHC1-204ENST00000407122 SPRYD7Q5W111 196 aa8.61□□□□□ -1.03
CLHC1-204ENST00000407122 GREM2Q9H772 168 aa8.61□□□□□ -1.03
CLHC1-204ENST00000407122 ANGEL1Q9UNK9 670 aaKnown RBP8.61□□□□□ -1.03
CLHC1-204ENST00000407122 MYO3BQ8WXR4 1341 aa8.61□□□□□ -1.03
CLHC1-204ENST00000407122 ZNF853P0CG23 659 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 KLRK1P26718 216 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 CTSWP56202 376 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 HABP4Q5JVS0 413 aaKnown RBP8.6□□□□□ -1.03
CLHC1-204ENST00000407122 STRIP1Q5VSL9 837 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 ARMC9Q7Z3E5 817 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 TTLL11Q8NHH1 800 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 GCC1Q96CN9 775 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 CDC5LQ99459 802 aaKnown RBP8.6□□□□□ -1.03
CLHC1-204ENST00000407122 METTL22Q9BUU2 404 aaPredicted RBP8.6□□□□□ -1.03
CLHC1-204ENST00000407122 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.6□□□□□ -1.03
CLHC1-204ENST00000407122 TRIM17Q9Y577 477 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 SSC5DA1L4H1 1573 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 OTOP1Q7RTM1 612 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 KIAA0825Q8IV33 1275 aa8.6□□□□□ -1.03
CLHC1-204ENST00000407122 ZBED3Q96IU2 234 aaPredicted RBP8.6□□□□□ -1.03
CLHC1-204ENST00000407122 BSDC1Q9NW68 430 aaPredicted RBP8.6□□□□□ -1.03
CLHC1-204ENST00000407122 A0A1B0GUL6 1792 aa8.59□□□□□ -1.03
CLHC1-204ENST00000407122 IGF2BP3O00425 579 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLHC1-204ENST00000407122 IGKV5-2P06315 115 aa8.59□□□□□ -1.03
CLHC1-204ENST00000407122 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
CLHC1-204ENST00000407122 APOBEC3FQ8IUX4 373 aaKnown RBP8.59□□□□□ -1.03
CLHC1-204ENST00000407122 COA1Q9GZY4 146 aa8.59□□□□□ -1.03
CLHC1-204ENST00000407122 ADAMTS8Q9UP79 889 aa8.59□□□□□ -1.03
CLHC1-204ENST00000407122 OTOFQ9HC10 1997 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms