RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PTMSP20962 102 aa15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 CRY2Q49AN0 593 aa15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 GRIPAP1Q4V328 841 aa15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 PARP10Q53GL7 1025 aa15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 HSP90AB4PQ58FF6 505 aa15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 ISCA1Q9BUE6 129 aa15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 CIZ1Q9ULV3 898 aaPredicted RBP15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 ABCC12Q96J65 1359 aa15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 UBN2Q6ZU65 1347 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 HUNKP57058 714 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 CXCL9Q07325 125 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 NOGQ13253 232 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 TRIM28Q13263 835 aaKnown RBP15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 CDC37L1Q7L3B6 337 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 PPP1R42Q7Z4L9 355 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 NLRP10Q86W26 655 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 HHIPL1Q96JK4 782 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 LRRCC1Q9C099 1032 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 ZNRF3Q9ULT6 936 aa15.72■□□□□ 0.11
SMARCB1-203ENST00000407082 AOX1Q06278 1338 aa15.71■□□□□ 0.11
SMARCB1-203ENST00000407082 IGKV5-2P06315 115 aa15.71■□□□□ 0.11
SMARCB1-203ENST00000407082 HOXA10P31260 410 aaPredicted RBP15.71■□□□□ 0.11
SMARCB1-203ENST00000407082 GSE1Q14687 1217 aa15.71■□□□□ 0.11
SMARCB1-203ENST00000407082 SUSD4Q5VX71 490 aa15.71■□□□□ 0.11
SMARCB1-203ENST00000407082 USP48Q86UV5 1035 aa15.71■□□□□ 0.11
SMARCB1-203ENST00000407082 LINS1Q8NG48 757 aa15.71■□□□□ 0.11
SMARCB1-203ENST00000407082 UTP14AQ9BVJ6 771 aaKnown RBP15.71■□□□□ 0.11
SMARCB1-203ENST00000407082 SNED1Q8TER0 1413 aa15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 RAD17O75943 681 aa15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 RABEP1Q15276 862 aa15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 CWF19L2Q2TBE0 894 aaKnown RBP15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 BEND3Q5T5X7 828 aa15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 DLK2Q6UY11 383 aa15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 CRAMP1Q96RY5 1269 aa15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 ANTXR1Q9H6X2 564 aa15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 CWC25Q9NXE8 425 aaPredicted RBP15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 TRMT112Q9UI30 125 aaKnown RBP15.7■□□□□ 0.1
SMARCB1-203ENST00000407082 TNRC18O15417 2968 aaPredicted RBP15.69■□□□□ 0.1
SMARCB1-203ENST00000407082 NEURL1BA8MQ27 555 aa15.69■□□□□ 0.1
SMARCB1-203ENST00000407082 TRPA1O75762 1119 aa15.69■□□□□ 0.1
SMARCB1-203ENST00000407082 HIRAP54198 1017 aaPredicted RBP15.69■□□□□ 0.1
SMARCB1-203ENST00000407082 SLKQ9H2G2 1235 aaPredicted RBP15.69■□□□□ 0.1
SMARCB1-203ENST00000407082 EPB41L2O43491 1005 aaKnown RBP15.68■□□□□ 0.1
SMARCB1-203ENST00000407082 ALDH1L1O75891 902 aa15.68■□□□□ 0.1
SMARCB1-203ENST00000407082 NTSR2O95665 410 aa15.68■□□□□ 0.1
SMARCB1-203ENST00000407082 TNIP1Q15025 636 aa15.68■□□□□ 0.1
SMARCB1-203ENST00000407082 PRPF38BQ5VTL8 546 aaKnown RBP15.68■□□□□ 0.1
SMARCB1-203ENST00000407082 SUPT20HQ8NEM7 779 aa15.68■□□□□ 0.1
SMARCB1-203ENST00000407082 TRPM4Q8TD43 1214 aa15.68■□□□□ 0.1
SMARCB1-203ENST00000407082 ZC3H15Q8WU90 426 aaKnown RBP15.68■□□□□ 0.1
SMARCB1-203ENST00000407082 CNOT7Q9UIV1 285 aaKnown RBP15.68■□□□□ 0.1
SMARCB1-203ENST00000407082 ANKRD36CQ5JPF3 1778 aa15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 SHTN1A0MZ66 631 aa15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 H7C1D1 291 aa15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 HSP90AA1P07900 732 aaKnown RBP15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 GSPT1P15170 499 aaKnown RBP15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 MCCP23508 829 aa15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 KIF23Q02241 960 aaPredicted RBP15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 GCKRQ14397 625 aa15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 RGMBQ6NW40 437 aa15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 C3orf67Q6ZVT6 689 aa15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 FAM89AQ96GI7 184 aa15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 PGAP2Q9UHJ9 254 aa15.67■□□□□ 0.1
SMARCB1-203ENST00000407082 IBTKQ9P2D0 1353 aaPredicted RBP15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 ERC2O15083 957 aa15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 FRAT2O75474 233 aaPredicted RBP15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 SDSP20132 328 aa15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 ZNF157P51786 506 aaPredicted RBP15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 PDE1AP54750 535 aa15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 C2orf69Q8N8R5 385 aa15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 ZBTB38Q8NAP3 1195 aaPredicted RBP15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 USP44Q9H0E7 712 aa15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 VPS33BQ9H267 617 aa15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 ATP6V0A2Q9Y487 856 aa15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 SH3TC1Q8TE82 1336 aa15.66■□□□□ 0.1
SMARCB1-203ENST00000407082 K7ELQ4 463 aaPredicted RBP15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 PCCAP05165 728 aaPredicted RBP15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 RBM26Q5T8P6 1007 aaKnown RBP15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 MPNDQ8N594 471 aa15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 SSH3Q8TE77 659 aa15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 JARID2Q92833 1246 aaPredicted RBP15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 CCDC102AQ96A19 550 aa15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 RNF186Q9NXI6 227 aa15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 STAP2Q9UGK3 403 aa15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 LRRFIP2Q9Y608 721 aaKnown RBP15.65■□□□□ 0.1
SMARCB1-203ENST00000407082 SAMD7Q7Z3H4 446 aa15.64■□□□□ 0.09
SMARCB1-203ENST00000407082 KRT26Q7Z3Y9 468 aa15.64■□□□□ 0.09
SMARCB1-203ENST00000407082 MICALL2Q8IY33 904 aa15.64■□□□□ 0.09
SMARCB1-203ENST00000407082 KIF1BPQ96EK5 621 aa15.64■□□□□ 0.09
SMARCB1-203ENST00000407082 USP26Q9BXU7 913 aa15.64■□□□□ 0.09
SMARCB1-203ENST00000407082 GBA2Q9HCG7 927 aaPredicted RBP15.64■□□□□ 0.09
SMARCB1-203ENST00000407082 DDX11L8A8MPP1 907 aa15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 H7C1W4 665 aa15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 ST18O60284 1047 aa15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 HCLS1P14317 486 aaPredicted RBP15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 MX1P20591 662 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms