RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 SEC62Q99442 399 aaKnown RBP4.57□□□□□ -1.68
RTN4-209ENST00000405240 PAG1Q9NWQ8 432 aa4.57□□□□□ -1.68
RTN4-209ENST00000405240 NLRP2Q9NX02 1062 aa4.57□□□□□ -1.68
RTN4-209ENST00000405240 CWC25Q9NXE8 425 aaPredicted RBP4.57□□□□□ -1.68
RTN4-209ENST00000405240 DOT1LQ8TEK3 1739 aa4.57□□□□□ -1.68
RTN4-209ENST00000405240 MAST3O60307 1309 aa4.57□□□□□ -1.68
RTN4-209ENST00000405240 RNF113AO15541 343 aaKnown RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 JAK2O60674 1132 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 CABP4P57796 275 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 HSP90AA2PQ14568 343 aaPredicted RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 CCDC129Q6ZRS4 1044 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 TTC5Q8N0Z6 440 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 CARD10Q9BWT7 1032 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 NUP62CLQ9H1M0 184 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 E7EWF7 191 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 FDPSP14324 419 aaKnown RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 TTLL7Q6ZT98 887 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 DDX54Q8TDD1 881 aaKnown RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 BRF1Q92994 677 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 CBX8Q9HC52 389 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 R3HCC1Q9Y3T6 440 aaKnown RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 UQCRHLA0A096LP55 91 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 ZBTB7CA1YPR0 619 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 M0R2C6 588 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 CTIFO43310 598 aaKnown RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 NR1I2O75469 434 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 UQCRHP07919 91 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 PDIA3P30101 505 aaKnown RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 FOXD4L6Q3SYB3 417 aaPredicted RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 FOXD4L3Q6VB84 417 aaPredicted RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 MTERF4Q7Z6M4 381 aaKnown RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 SPATA32Q96LK8 384 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 ZMYM6O95789 1325 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 SCN7AQ01118 1682 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 VPS37CA5D8V6 355 aaPredicted RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 ATF3P18847 181 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 ZNF75DP51815 510 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 FAM173BQ6P4H8 233 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 BRINP3Q76B58 766 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 MB21D2Q8IYB1 491 aaPredicted RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 VGLL2Q8N8G2 317 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 ZCRB1Q8TBF4 217 aaKnown RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 DDX17Q92841 729 aaKnown RBP4.56□□□□□ -1.68
RTN4-209ENST00000405240 TCEANC2Q96MN5 208 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 BPIFA3Q9BQP9 254 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 GOLPH3LQ9H4A5 285 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 DACT1Q9NYF0 836 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 CFAP45Q9UL16 551 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 HPS5Q9UPZ3 1129 aa4.56□□□□□ -1.68
RTN4-209ENST00000405240 LAMB1P07942 1786 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 A0A0G2JLW4 131 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 FAM237AA0A1B0GTK4 181 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 A0A1W2PQ27 194 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 A0A1W2PQ64 194 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 A0A1W2PQD8 194 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 ATP5J2-PTCD1G3V325 749 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 CTAGE5O15320 804 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 PTCD1O75127 700 aaKnown RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 PCCAP05165 728 aaPredicted RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 RBM6P78332 1123 aaKnown RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 TCIRG1Q13488 830 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 SYCP1Q15431 976 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 LRRC24Q50LG9 513 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 ZNF710Q8N1W2 664 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 CHMP4CQ96CF2 233 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 NBPF3Q9H094 633 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 RTEL1Q9NZ71 1219 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 PYCARDQ9ULZ3 195 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 NDUFB9Q9Y6M9 179 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 BCL9LQ86UU0 1499 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 DDX46Q7L014 1031 aaKnown RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 JARID2Q92833 1246 aaPredicted RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 OSBP2Q969R2 916 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 TTC12Q9H892 705 aaPredicted RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 RIPOR2Q9Y4F9 1068 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 MYH6P13533 1939 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 MYH2Q9UKX2 1941 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 BCL9O00512 1426 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 A0A1B0GUL7 405 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 PTPDC1A2A3K4 754 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 ZFYP08048 801 aaPredicted RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 KCNJ4P48050 445 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 PIP4K2AP48426 406 aaPredicted RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 ANTXR2P58335 489 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 ANO6Q4KMQ2 910 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 DHX40Q8IX18 779 aaKnown RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 FMR1NBQ8N0W7 255 aaPredicted RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 CABLES1Q8TDN4 633 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 ANKRD7Q92527 254 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 MRFAP1L1Q96HT8 127 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 ZNF830Q96NB3 372 aaPredicted RBP4.55□□□□□ -1.68
RTN4-209ENST00000405240 TNMDQ9H2S6 317 aa4.55□□□□□ -1.68
RTN4-209ENST00000405240 MAST2Q6P0Q8 1798 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 AHDC1Q5TGY3 1603 aaPredicted RBP4.54□□□□□ -1.68
RTN4-209ENST00000405240 DTNBO60941 627 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 TIMM10P62072 90 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 CHRNA2Q15822 529 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 CACNA1SQ13698 1873 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 TCRBV5S4A2TA0A5A2 114 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 GOLIM4O00461 696 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms