RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 TDRD12Q587J7 1177 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 CREB3L3Q68CJ9 461 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 ANKRD18AQ8IVF6 992 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 SLF2Q8IX21 1173 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 SYCP3Q8IZU3 236 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 ARHGAP45Q92619 1136 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 CALML4Q96GE6 196 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 CCDC113Q9H0I3 377 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 SLC4A4Q9Y6R1 1079 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 ZFYVE9O95405 1425 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 RGPD2P0DJD1 1756 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 FLT4P35916 1363 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 ZC3H13Q5T200 1668 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 DCAF8L1A6NGE4 600 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 ZBTB7BO15156 539 aaPredicted RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 IDEP14735 1019 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 LIG1P18858 919 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 LMOD1P29536 600 aaPredicted RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 RBM25P49756 843 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 TNIP1Q15025 636 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 TMEM266Q2M3C6 531 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 FKBP15Q5T1M5 1219 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 TCERG1LQ5VWI1 586 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 LRSAM1Q6UWE0 723 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 TTC12Q9H892 705 aaPredicted RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 GLI2P10070 1586 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 RRP9O43818 475 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 KCNA6P17658 529 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 STAT6P42226 847 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 HSPA2P54652 639 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 TFCP2Q12800 502 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 NMIQ13287 307 aaPredicted RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 KLHDC4Q8TBB5 520 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 NLRP3Q96P20 1036 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 TSG101Q99816 390 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 CRACR2AQ9BSW2 395 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 DCTPP1Q9H773 170 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 LGR6Q9HBX8 967 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 DDX19AQ9NUU7 478 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 DACT1Q9NYF0 836 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 FER1L4A9Z1Z3 1794 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 TRIM21P19474 475 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 USP8P40818 1118 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 ST5P78524 1137 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 IQCEQ6IPM2 695 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 NAA16Q6N069 864 aaPredicted RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 ZNF790Q6PG37 636 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 RUFY3Q7L099 469 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 DZIP3Q86Y13 1208 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 ZNF594Q96JF6 807 aaPredicted RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 CRNKL1Q9BZJ0 848 aaKnown RBP3.74□□□□□ -1.81
KNL1-202ENST00000399668 SPAG17Q6Q759 2223 aa3.74□□□□□ -1.81
KNL1-202ENST00000399668 SOS1Q07889 1333 aaPredicted RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 EDC4Q6P2E9 1401 aaKnown RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 MACROD2A1Z1Q3 448 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 GBP2P32456 591 aaPredicted RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 PICALMQ13492 652 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 PRPF4BQ13523 1007 aaKnown RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 KLHL40Q2TBA0 621 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 TXLNBQ8N3L3 684 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 OTUD7AQ8TE49 926 aaPredicted RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 ARHGEF17Q96PE2 2063 aaPredicted RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 ECM2O94769 699 aaPredicted RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 KIAA0754O94854 1291 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 CCDC102BQ68D86 513 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 KRI1Q8N9T8 703 aaKnown RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 CUL5Q93034 780 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 BTG4Q9NY30 223 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 SPTBP11277 2137 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 ABCA8O94911 1581 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 PNMA6EA0A0J9YXQ4 647 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 HOXC9P31274 260 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 ARID5AQ03989 594 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 SNW1Q13573 536 aaKnown RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 DDB1Q16531 1140 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 JAKMIP3Q5VZ66 844 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 CEP135Q66GS9 1140 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 CCDC129Q6ZRS4 1044 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 ORAI2Q96SN7 254 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 USP26Q9BXU7 913 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 DMRT2Q9Y5R5 561 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 CAMSAP1Q5T5Y3 1602 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 MAGEB6P1A0A0J9YX57 407 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 IL2RBP14784 551 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 CHMLP26374 656 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 PLCD4Q9BRC7 762 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 JADE2Q9NQC1 790 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 TP53BP1Q12888 1972 aaPredicted RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 FMN2Q9NZ56 1722 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 ZSCAN12O43309 604 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 ERLIN1O75477 346 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 MCM7P33993 719 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 HLTFQ14527 1009 aaKnown RBP eCLIP3.73□□□□□ -1.816e-7■■■■□ 19.3
KNL1-202ENST00000399668 TMCO3Q6UWJ1 677 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 CCDC191Q8NCU4 936 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 KCNG4Q8TDN1 519 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 CTNNBL1Q8WYA6 563 aaPredicted RBP3.73□□□□□ -1.81
KNL1-202ENST00000399668 IP6K1Q92551 441 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 ESR2Q92731 530 aa3.73□□□□□ -1.81
KNL1-202ENST00000399668 FAM227BQ96M60 508 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms