RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 ILDR2Q71H61 639 aa10.46□□□□□ -0.74
GIN1-201ENST00000399004 AACSQ86V21 672 aa10.46□□□□□ -0.74
GIN1-201ENST00000399004 PRIMPOLQ96LW4 560 aa10.46□□□□□ -0.74
GIN1-201ENST00000399004 HMG20BQ9P0W2 317 aa10.46□□□□□ -0.74
GIN1-201ENST00000399004 CYP46A1Q9Y6A2 500 aa10.46□□□□□ -0.74
GIN1-201ENST00000399004 MYO5AQ9Y4I1 1855 aaKnown RBP10.46□□□□□ -0.74
GIN1-201ENST00000399004 H7C1W4 665 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 JAK2O60674 1132 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 TEFQ10587 303 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 ME3Q16798 604 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 C1orf141Q5JVX7 400 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 RUFY2Q8WXA3 655 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 FBXO3Q9UK99 471 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 USP27XA6NNY8 438 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 DDX58O95786 925 aaKnown RBP10.45□□□□□ -0.74
GIN1-201ENST00000399004 EVCP57679 992 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 MPRIPQ6WCQ1 1025 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 CHST3Q7LGC8 479 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 FAM184AQ8NB25 1140 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 EAF2Q96CJ1 260 aaPredicted RBP10.45□□□□□ -0.74
GIN1-201ENST00000399004 FSD1Q9BTV5 496 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 ATP6V1DQ9Y5K8 247 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 LETM1O95202 739 aaPredicted RBP10.45□□□□□ -0.74
GIN1-201ENST00000399004 ZNF165P49910 485 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 KRT85P78386 507 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 FOXO4P98177 505 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 PLA2G12BQ9BX93 195 aa10.45□□□□□ -0.74
GIN1-201ENST00000399004 BICC1Q9H694 974 aaKnown RBP10.45□□□□□ -0.74
GIN1-201ENST00000399004 LAMB1P07942 1786 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 CYP27B1O15528 508 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 NR1I2O75469 434 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 ZKSCAN1P17029 563 aaPredicted RBP10.44□□□□□ -0.74
GIN1-201ENST00000399004 PTPN12Q05209 780 aaKnown RBP10.44□□□□□ -0.74
GIN1-201ENST00000399004 CWF19L2Q2TBE0 894 aaKnown RBP10.44□□□□□ -0.74
GIN1-201ENST00000399004 KIAA1524Q8TCG1 905 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 GTF3C6Q969F1 213 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 DNAJC2Q99543 621 aaKnown RBP10.44□□□□□ -0.74
GIN1-201ENST00000399004 CBX8Q9HC52 389 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 SALL1Q9NSC2 1324 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 PRAMEF22A3QJZ6 481 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 ERVV-2B6SEH9 535 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 CIAO1O76071 339 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 CCT2P78371 535 aaKnown RBP10.44□□□□□ -0.74
GIN1-201ENST00000399004 IFNL2Q8IZJ0 200 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 CCAR2Q8N163 923 aaKnown RBP10.44□□□□□ -0.74
GIN1-201ENST00000399004 MTMR6Q9Y217 621 aa10.44□□□□□ -0.74
GIN1-201ENST00000399004 SLFNL1Q499Z3 407 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 CLASRPQ8N2M8 674 aaKnown RBP10.43□□□□□ -0.74
GIN1-201ENST00000399004 NID2Q14112 1375 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 SKIDA1Q1XH10 827 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 CCDC129Q6ZRS4 1044 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 PLBD2Q8NHP8 589 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 HAUS7Q99871 368 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 TPCN1Q9ULQ1 816 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 WDR17Q8IZU2 1322 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 POLR3GO15318 223 aaPredicted RBP10.43□□□□□ -0.74
GIN1-201ENST00000399004 TRIM28Q13263 835 aaKnown RBP10.43□□□□□ -0.74
GIN1-201ENST00000399004 ELF2Q15723 593 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 GPATCH3Q96I76 525 aa10.43□□□□□ -0.74
GIN1-201ENST00000399004 RBM8AQ9Y5S9 174 aaKnown RBP10.43□□□□□ -0.74
GIN1-201ENST00000399004 SNRPA1P09661 255 aaKnown RBP10.42□□□□□ -0.74
GIN1-201ENST00000399004 NCBP1Q09161 790 aaKnown RBP10.42□□□□□ -0.74
GIN1-201ENST00000399004 TOB2Q14106 344 aaPredicted RBP10.42□□□□□ -0.74
GIN1-201ENST00000399004 ZRSR1Q15695 479 aaKnown RBP10.42□□□□□ -0.74
GIN1-201ENST00000399004 SLC27A2O14975 620 aa10.42□□□□□ -0.74
GIN1-201ENST00000399004 CCDC144BQ3MJ40 725 aa10.42□□□□□ -0.74
GIN1-201ENST00000399004 EPHA10Q5JZY3 1008 aa10.42□□□□□ -0.74
GIN1-201ENST00000399004 CREB3L3Q68CJ9 461 aa10.42□□□□□ -0.74
GIN1-201ENST00000399004 CCDC144CPQ8IYA2 1237 aa10.42□□□□□ -0.74
GIN1-201ENST00000399004 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
GIN1-201ENST00000399004 CACTINQ8WUQ7 758 aaKnown RBP10.42□□□□□ -0.74
GIN1-201ENST00000399004 CARMIL3Q8ND23 1372 aa10.42□□□□□ -0.74
GIN1-201ENST00000399004 RIC1Q4ADV7 1423 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 TAF5LO75529 589 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 SMC2O95347 1197 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 HOXD11P31277 338 aaPredicted RBP10.41□□□□□ -0.74
GIN1-201ENST00000399004 HOMER1Q86YM7 354 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 FAM200AQ8TCP9 573 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 TLR7Q9NYK1 1049 aaKnown RBP10.41□□□□□ -0.74
GIN1-201ENST00000399004 MRVI1Q9Y6F6 885 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 BCL9LQ86UU0 1499 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 WDR19Q8NEZ3 1342 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 MYL6BP14649 208 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 RPS6KB1P23443 525 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 ATG9AQ7Z3C6 839 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 ZNF512BQ96KM6 892 aaPredicted RBP10.41□□□□□ -0.74
GIN1-201ENST00000399004 ZNF215Q9UL58 517 aaPredicted RBP10.41□□□□□ -0.74
GIN1-201ENST00000399004 NMIQ13287 307 aaPredicted RBP10.41□□□□□ -0.74
GIN1-201ENST00000399004 BLOC1S2Q6QNY1 142 aa10.41□□□□□ -0.74
GIN1-201ENST00000399004 ZNF330Q9Y3S2 320 aaPredicted RBP10.41□□□□□ -0.74
GIN1-201ENST00000399004 PCDH11XQ9BZA7 1347 aa10.4□□□□□ -0.74
GIN1-201ENST00000399004 PCDH11YQ9BZA8 1340 aa10.4□□□□□ -0.74
GIN1-201ENST00000399004 GNL2Q13823 731 aaKnown RBP10.4□□□□□ -0.74
GIN1-201ENST00000399004 ANKRD1Q15327 319 aa10.4□□□□□ -0.74
GIN1-201ENST00000399004 CEP135Q66GS9 1140 aa10.4□□□□□ -0.74
GIN1-201ENST00000399004 ME1P48163 572 aa10.4□□□□□ -0.74
GIN1-201ENST00000399004 GOLGA8FQ08AF8 430 aa10.4□□□□□ -0.74
GIN1-201ENST00000399004 GOLGA8DPQ0D2H9 430 aa10.4□□□□□ -0.74
GIN1-201ENST00000399004 TNNI3KQ59H18 835 aa10.4□□□□□ -0.74
GIN1-201ENST00000399004 OTUD7BQ6GQQ9 843 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms