RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 APAF1O14727 1248 aa12.73□□□□□ -0.37
NIFKP1-201ENST00000398317 RAD17O75943 681 aa12.73□□□□□ -0.37
NIFKP1-201ENST00000398317 GMPSP49915 693 aaPredicted RBP12.73□□□□□ -0.37
NIFKP1-201ENST00000398317 KIAA2012Q0VF49 1180 aa12.73□□□□□ -0.37
NIFKP1-201ENST00000398317 GPRC5DQ9NZD1 345 aa12.73□□□□□ -0.37
NIFKP1-201ENST00000398317 ELL2O00472 640 aaPredicted RBP12.72□□□□□ -0.37
NIFKP1-201ENST00000398317 ZNF853P0CG23 659 aa12.72□□□□□ -0.37
NIFKP1-201ENST00000398317 CIAPIN1Q6FI81 312 aa12.72□□□□□ -0.37
NIFKP1-201ENST00000398317 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
NIFKP1-201ENST00000398317 AIDAQ96BJ3 306 aa12.72□□□□□ -0.37
NIFKP1-201ENST00000398317 ADARB2Q9NS39 739 aaKnown RBP12.72□□□□□ -0.37
NIFKP1-201ENST00000398317 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
NIFKP1-201ENST00000398317 COL4A1P02462 1669 aa12.72□□□□□ -0.37
NIFKP1-201ENST00000398317 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
NIFKP1-201ENST00000398317 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.37
NIFKP1-201ENST00000398317 SHTN1A0MZ66 631 aa12.71□□□□□ -0.37
NIFKP1-201ENST00000398317 YDJCA8MPS7 323 aa12.71□□□□□ -0.37
NIFKP1-201ENST00000398317 CST9Q5W186 159 aa12.71□□□□□ -0.37
NIFKP1-201ENST00000398317 BCL2L13Q9BXK5 485 aa12.71□□□□□ -0.37
NIFKP1-201ENST00000398317 PHAXQ9H814 394 aaKnown RBP12.71□□□□□ -0.37
NIFKP1-201ENST00000398317 WBP1LQ9NX94 342 aa12.71□□□□□ -0.37
NIFKP1-201ENST00000398317 DUOX1Q9NRD9 1551 aa12.71□□□□□ -0.37
NIFKP1-201ENST00000398317 LRRC37AA6NMS7 1700 aa12.71□□□□□ -0.38
NIFKP1-201ENST00000398317 IRS4O14654 1257 aaPredicted RBP12.7□□□□□ -0.38
NIFKP1-201ENST00000398317 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
NIFKP1-201ENST00000398317 GRM1Q13255 1194 aa12.7□□□□□ -0.38
NIFKP1-201ENST00000398317 TNIP1Q15025 636 aa12.7□□□□□ -0.38
NIFKP1-201ENST00000398317 SF3B3Q15393 1217 aaKnown RBP12.7□□□□□ -0.38
NIFKP1-201ENST00000398317 TMC4Q7Z404 712 aa12.7□□□□□ -0.38
NIFKP1-201ENST00000398317 RIC3Q7Z5B4 369 aa12.7□□□□□ -0.38
NIFKP1-201ENST00000398317 LBX1P52954 281 aa12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 HIRAP54198 1017 aaPredicted RBP12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 GPSM2P81274 684 aa12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 TRIM28Q13263 835 aaKnown RBP12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 CYP4F22Q6NT55 531 aa12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 C8orf58Q8NAV2 365 aa12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 TRPM4Q8TD43 1214 aa12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 JARID2Q92833 1246 aaPredicted RBP12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 GLIS2Q9BZE0 524 aaPredicted RBP12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 DBNDD1Q9H9R9 158 aa12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 PRDM10Q9NQV6 1147 aa12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 POLLQ9UGP5 575 aa12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 CNOT7Q9UIV1 285 aaKnown RBP12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 NSFL1CQ9UNZ2 370 aaKnown RBP12.69□□□□□ -0.38
NIFKP1-201ENST00000398317 C6orf229H3BNL8 230 aa12.68□□□□□ -0.38
NIFKP1-201ENST00000398317 GNAI1P63096 354 aa12.68□□□□□ -0.38
NIFKP1-201ENST00000398317 WASHC4Q2M389 1173 aa12.68□□□□□ -0.38
NIFKP1-201ENST00000398317 CAPNS2Q96L46 248 aa12.68□□□□□ -0.38
NIFKP1-201ENST00000398317 GPR101Q96P66 508 aaPredicted RBP12.68□□□□□ -0.38
NIFKP1-201ENST00000398317 MYD88Q99836 296 aa12.68□□□□□ -0.38
NIFKP1-201ENST00000398317 KRTAP3-3Q9BYR6 98 aa12.68□□□□□ -0.38
NIFKP1-201ENST00000398317 KRTAP3-2Q9BYR7 98 aa12.68□□□□□ -0.38
NIFKP1-201ENST00000398317 PSMD14O00487 310 aa12.67□□□□□ -0.38
NIFKP1-201ENST00000398317 CELF2O95319 508 aaKnown RBP12.67□□□□□ -0.38
NIFKP1-201ENST00000398317 HSPA8P11142 646 aaKnown RBP12.67□□□□□ -0.38
NIFKP1-201ENST00000398317 RPS8P62241 208 aaKnown RBP12.67□□□□□ -0.38
NIFKP1-201ENST00000398317 ZBTB38Q8NAP3 1195 aaPredicted RBP12.67□□□□□ -0.38
NIFKP1-201ENST00000398317 SEC31BQ9NQW1 1179 aa12.67□□□□□ -0.38
NIFKP1-201ENST00000398317 KCNQ5Q9NR82 932 aa12.67□□□□□ -0.38
NIFKP1-201ENST00000398317 TLL2Q9Y6L7 1015 aa12.67□□□□□ -0.38
NIFKP1-201ENST00000398317 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
NIFKP1-201ENST00000398317 H7C1D1 291 aa12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 AOC2O75106 756 aa12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 MAP2K1Q02750 393 aaPredicted RBP12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 CCDC184Q52MB2 194 aa12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 ZNF687Q8N1G0 1237 aa12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 ZNF454Q8N9F8 522 aa12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 CCDC85AQ96PX6 553 aaPredicted RBP12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 ZNF408Q9H9D4 720 aa12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 PGAP2Q9UHJ9 254 aa12.66□□□□□ -0.38
NIFKP1-201ENST00000398317 CDHR2Q9BYE9 1310 aa12.65□□□□□ -0.38
NIFKP1-201ENST00000398317 ECE2O60344 883 aa12.65□□□□□ -0.38
NIFKP1-201ENST00000398317 ECE1P42892 770 aa12.65□□□□□ -0.38
NIFKP1-201ENST00000398317 DLK2Q6UY11 383 aa12.65□□□□□ -0.38
NIFKP1-201ENST00000398317 SAMD7Q7Z3H4 446 aa12.65□□□□□ -0.38
NIFKP1-201ENST00000398317 TBC1D16Q8TBP0 767 aa12.65□□□□□ -0.38
NIFKP1-201ENST00000398317 THSD7BQ9C0I4 1608 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 EGFRP00533 1210 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 PCCAP05165 728 aaPredicted RBP12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 TBC1D10BQ4KMP7 808 aaPredicted RBP12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 RBM26Q5T8P6 1007 aaKnown RBP12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 CCDC30Q5VVM6 783 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 SAPCD2Q86UD0 394 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 USP48Q86UV5 1035 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 CCDC191Q8NCU4 936 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 ZC3H15Q8WU90 426 aaKnown RBP12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 DPF2Q92785 391 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 EYA3Q99504 573 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 METTL22Q9BUU2 404 aaPredicted RBP12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 CWC25Q9NXE8 425 aaPredicted RBP12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
NIFKP1-201ENST00000398317 PDE8AO60658 829 aa12.63□□□□□ -0.39
NIFKP1-201ENST00000398317 UFL1O94874 794 aa12.63□□□□□ -0.39
NIFKP1-201ENST00000398317 CCDC152Q4G0S7 254 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms