RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
SEC13-205ENST00000397101 SREBF2Q12772 1141 aa17.49■□□□□ 0.39
SEC13-205ENST00000397101 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
SEC13-205ENST00000397101 LAS1LQ9Y4W2 734 aaKnown RBP17.49■□□□□ 0.39
SEC13-205ENST00000397101 CENPFP49454 3210 aa17.49■□□□□ 0.39
SEC13-205ENST00000397101 BRCA2P51587 3418 aa17.49■□□□□ 0.39
SEC13-205ENST00000397101 MYO3BQ8WXR4 1341 aa17.48■□□□□ 0.39
SEC13-205ENST00000397101 UBE2Q2LH0YL09 131 aa17.48■□□□□ 0.39
SEC13-205ENST00000397101 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
SEC13-205ENST00000397101 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
SEC13-205ENST00000397101 NF2P35240 595 aa17.47■□□□□ 0.39
SEC13-205ENST00000397101 DUSP27Q5VZP5 1158 aa17.47■□□□□ 0.39
SEC13-205ENST00000397101 ANKRD18AQ8IVF6 992 aa17.47■□□□□ 0.39
SEC13-205ENST00000397101 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
SEC13-205ENST00000397101 MED23Q9ULK4 1368 aa17.47■□□□□ 0.39
SEC13-205ENST00000397101 WNT10BO00744 389 aa17.46■□□□□ 0.39
SEC13-205ENST00000397101 FKTNO75072 461 aa17.46■□□□□ 0.39
SEC13-205ENST00000397101 ALDH1A1P00352 501 aa17.46■□□□□ 0.39
SEC13-205ENST00000397101 NBPF9Q3BBW0 867 aa17.46■□□□□ 0.39
SEC13-205ENST00000397101 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
SEC13-205ENST00000397101 OGFOD1Q8N543 542 aa17.46■□□□□ 0.39
SEC13-205ENST00000397101 DACT2Q5SW24 774 aa17.45■□□□□ 0.38
SEC13-205ENST00000397101 STRIP1Q5VSL9 837 aa17.45■□□□□ 0.38
SEC13-205ENST00000397101 CDC5LQ99459 802 aaKnown RBP17.45■□□□□ 0.38
SEC13-205ENST00000397101 CENPBP07199 599 aaPredicted RBP17.44■□□□□ 0.38
SEC13-205ENST00000397101 INHBEP58166 350 aa17.44■□□□□ 0.38
SEC13-205ENST00000397101 TTLL12Q14166 644 aaPredicted RBP17.44■□□□□ 0.38
SEC13-205ENST00000397101 INTS3Q68E01 1043 aaKnown RBP17.44■□□□□ 0.38
SEC13-205ENST00000397101 ARMC9Q7Z3E5 817 aa17.44■□□□□ 0.38
SEC13-205ENST00000397101 CWC25Q9NXE8 425 aaPredicted RBP17.44■□□□□ 0.38
SEC13-205ENST00000397101 LDLRAD1Q5T700 205 aa17.43■□□□□ 0.38
SEC13-205ENST00000397101 APOBEC3FQ8IUX4 373 aaKnown RBP17.43■□□□□ 0.38
SEC13-205ENST00000397101 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
SEC13-205ENST00000397101 MYD88Q99836 296 aa17.43■□□□□ 0.38
SEC13-205ENST00000397101 CHMP4AQ9BY43 222 aa17.43■□□□□ 0.38
SEC13-205ENST00000397101 COA1Q9GZY4 146 aa17.43■□□□□ 0.38
SEC13-205ENST00000397101 BSDC1Q9NW68 430 aaPredicted RBP17.43■□□□□ 0.38
SEC13-205ENST00000397101 E9PSI1 815 aa17.42■□□□□ 0.38
SEC13-205ENST00000397101 ZNF853P0CG23 659 aa17.42■□□□□ 0.38
SEC13-205ENST00000397101 PTPN12Q05209 780 aaKnown RBP17.42■□□□□ 0.38
SEC13-205ENST00000397101 PRAMEF18Q5VWM3 479 aa17.42■□□□□ 0.38
SEC13-205ENST00000397101 METTL22Q9BUU2 404 aaPredicted RBP17.42■□□□□ 0.38
SEC13-205ENST00000397101 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
SEC13-205ENST00000397101 COL1A1P02452 1464 aaPredicted RBP17.42■□□□□ 0.38
SEC13-205ENST00000397101 ZNF521Q96K83 1311 aa17.42■□□□□ 0.38
SEC13-205ENST00000397101 UNCXA6NJT0 531 aa17.41■□□□□ 0.38
SEC13-205ENST00000397101 GNAI1P63096 354 aa17.41■□□□□ 0.38
SEC13-205ENST00000397101 MAP3K11Q16584 847 aa17.41■□□□□ 0.38
SEC13-205ENST00000397101 SPRYD7Q5W111 196 aa17.41■□□□□ 0.38
SEC13-205ENST00000397101 ZBED3Q96IU2 234 aaPredicted RBP17.41■□□□□ 0.38
SEC13-205ENST00000397101 PHAXQ9H814 394 aaKnown RBP17.41■□□□□ 0.38
SEC13-205ENST00000397101 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
SEC13-205ENST00000397101 MINPP1Q9UNW1 487 aa17.41■□□□□ 0.38
SEC13-205ENST00000397101 SCAF8Q9UPN6 1271 aaKnown RBP17.41■□□□□ 0.38
SEC13-205ENST00000397101 MANSC4A6NHS7 340 aaPredicted RBP17.4■□□□□ 0.38
SEC13-205ENST00000397101 DDX58O95786 925 aaKnown RBP17.4■□□□□ 0.38
SEC13-205ENST00000397101 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
SEC13-205ENST00000397101 CTSWP56202 376 aa17.4■□□□□ 0.38
SEC13-205ENST00000397101 LEMD3Q9Y2U8 911 aa17.4■□□□□ 0.38
SEC13-205ENST00000397101 IL16Q14005 1332 aa17.4■□□□□ 0.38
SEC13-205ENST00000397101 ZBTB48P10074 688 aaPredicted RBP17.39■□□□□ 0.37
SEC13-205ENST00000397101 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
SEC13-205ENST00000397101 TTLL11Q8NHH1 800 aa17.39■□□□□ 0.37
SEC13-205ENST00000397101 CCDC85AQ96PX6 553 aaPredicted RBP17.39■□□□□ 0.37
SEC13-205ENST00000397101 R3HDMLQ9H3Y0 253 aa17.39■□□□□ 0.37
SEC13-205ENST00000397101 IFT57Q9NWB7 429 aa17.39■□□□□ 0.37
SEC13-205ENST00000397101 ZNF646O15015 1829 aaPredicted RBP17.38■□□□□ 0.37
SEC13-205ENST00000397101 MKRN3Q13064 507 aaKnown RBP17.38■□□□□ 0.37
SEC13-205ENST00000397101 HABP4Q5JVS0 413 aaKnown RBP17.37■□□□□ 0.37
SEC13-205ENST00000397101 TTLL5Q6EMB2 1281 aa17.37■□□□□ 0.37
SEC13-205ENST00000397101 OTOP1Q7RTM1 612 aa17.37■□□□□ 0.37
SEC13-205ENST00000397101 IFNL1Q8IU54 200 aa17.37■□□□□ 0.37
SEC13-205ENST00000397101 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
SEC13-205ENST00000397101 MXD3Q9BW11 206 aa17.37■□□□□ 0.37
SEC13-205ENST00000397101 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
SEC13-205ENST00000397101 PPP2R3BQ9Y5P8 575 aa17.37■□□□□ 0.37
SEC13-205ENST00000397101 WTIPA6NIX2 430 aaPredicted RBP17.36■□□□□ 0.37
SEC13-205ENST00000397101 SASH1O94885 1247 aa17.36■□□□□ 0.37
SEC13-205ENST00000397101 MTMR14Q8NCE2 650 aa17.36■□□□□ 0.37
SEC13-205ENST00000397101 GREM2Q9H772 168 aa17.36■□□□□ 0.37
SEC13-205ENST00000397101 ANGEL1Q9UNK9 670 aaKnown RBP17.36■□□□□ 0.37
SEC13-205ENST00000397101 TRIM17Q9Y577 477 aa17.36■□□□□ 0.37
SEC13-205ENST00000397101 CCDC30Q5VVM6 783 aa17.35■□□□□ 0.37
SEC13-205ENST00000397101 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
SEC13-205ENST00000397101 SLC10A4Q96EP9 437 aa17.35■□□□□ 0.37
SEC13-205ENST00000397101 ANKRD2Q9GZV1 360 aa17.35■□□□□ 0.37
SEC13-205ENST00000397101 DEFB129Q9H1M3 183 aa17.35■□□□□ 0.37
SEC13-205ENST00000397101 ZNF804BA4D1E1 1349 aa17.34■□□□□ 0.37
SEC13-205ENST00000397101 PPP1R12BO60237 982 aaPredicted RBP17.34■□□□□ 0.37
SEC13-205ENST00000397101 IGKV5-2P06315 115 aa17.34■□□□□ 0.37
SEC13-205ENST00000397101 LAMB1P07942 1786 aa17.34■□□□□ 0.37
SEC13-205ENST00000397101 IGHMBP2P38935 993 aaKnown RBP17.34■□□□□ 0.37
SEC13-205ENST00000397101 KSR2Q6VAB6 950 aa17.34■□□□□ 0.37
SEC13-205ENST00000397101 TXNRD3Q86VQ6 643 aa17.34■□□□□ 0.37
SEC13-205ENST00000397101 ARMC5Q96C12 935 aa17.34■□□□□ 0.37
SEC13-205ENST00000397101 ERO1AQ96HE7 468 aa17.34■□□□□ 0.37
SEC13-205ENST00000397101 MAP3K2Q9Y2U5 619 aa17.34■□□□□ 0.37
SEC13-205ENST00000397101 FANCIQ9NVI1 1328 aa17.33■□□□□ 0.36
SEC13-205ENST00000397101 POTEFA5A3E0 1075 aa17.33■□□□□ 0.36
SEC13-205ENST00000397101 KIAA0825Q8IV33 1275 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms