RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 C2CD5Q86YS7 1000 aa16.49■□□□□ 0.23
MCF2L-209ENST00000397036 ANKRD31Q8N7Z5 1873 aa16.49■□□□□ 0.23
MCF2L-209ENST00000397036 CNKSR1Q969H4 720 aa16.49■□□□□ 0.23
MCF2L-209ENST00000397036 GNL3LQ9NVN8 582 aaKnown RBP16.49■□□□□ 0.23
MCF2L-209ENST00000397036 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
MCF2L-209ENST00000397036 IRS2Q9Y4H2 1338 aa16.48■□□□□ 0.23
MCF2L-209ENST00000397036 IGSF3O75054 1194 aa16.48■□□□□ 0.23
MCF2L-209ENST00000397036 MCAMP43121 646 aa16.48■□□□□ 0.23
MCF2L-209ENST00000397036 KCNJ4P48050 445 aa16.48■□□□□ 0.23
MCF2L-209ENST00000397036 FAM84BQ96KN1 310 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-209ENST00000397036 TBC1D32Q96NH3 1257 aa16.48■□□□□ 0.23
MCF2L-209ENST00000397036 PDS5AQ29RF7 1337 aaKnown RBP16.48■□□□□ 0.23
MCF2L-209ENST00000397036 SPEF2Q9C093 1822 aa16.47■□□□□ 0.23
MCF2L-209ENST00000397036 PPEF1O14829 653 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-209ENST00000397036 SGSM2O43147 1006 aa16.47■□□□□ 0.23
MCF2L-209ENST00000397036 POLD1P28340 1107 aa16.47■□□□□ 0.23
MCF2L-209ENST00000397036 BCAMP50895 628 aa16.47■□□□□ 0.23
MCF2L-209ENST00000397036 SCARF1Q14162 830 aa16.47■□□□□ 0.23
MCF2L-209ENST00000397036 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
MCF2L-209ENST00000397036 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
MCF2L-209ENST00000397036 DIAPH3Q9NSV4 1193 aa16.47■□□□□ 0.23
MCF2L-209ENST00000397036 ANKIB1Q9P2G1 1089 aa16.47■□□□□ 0.23
MCF2L-209ENST00000397036 RAD50Q92878 1312 aa16.47■□□□□ 0.23
MCF2L-209ENST00000397036 TAF1P21675 1872 aa16.46■□□□□ 0.23
MCF2L-209ENST00000397036 ARAP2Q8WZ64 1704 aa16.46■□□□□ 0.23
MCF2L-209ENST00000397036 GOLIM4O00461 696 aa16.46■□□□□ 0.23
MCF2L-209ENST00000397036 ZFYP08048 801 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-209ENST00000397036 RBM25P49756 843 aaKnown RBP16.46■□□□□ 0.23
MCF2L-209ENST00000397036 MFAP1P55081 439 aaKnown RBP16.46■□□□□ 0.23
MCF2L-209ENST00000397036 R3HDM1Q15032 1099 aaKnown RBP16.46■□□□□ 0.23
MCF2L-209ENST00000397036 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
MCF2L-209ENST00000397036 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
MCF2L-209ENST00000397036 HMG20BQ9P0W2 317 aa16.46■□□□□ 0.23
MCF2L-209ENST00000397036 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
MCF2L-209ENST00000397036 ZAP70P43403 619 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 TGFB2P61812 414 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 GPSM2P81274 684 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
MCF2L-209ENST00000397036 GRIPAP1Q4V328 841 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 SPATA5Q8NB90 893 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 EDC3Q96F86 508 aaKnown RBP16.45■□□□□ 0.22
MCF2L-209ENST00000397036 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 C22orf23Q9BZE7 217 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-209ENST00000397036 GGA1Q9UJY5 639 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 CYP2E1P05181 493 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-209ENST00000397036 RASGRF1Q13972 1273 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 TMED8Q6PL24 325 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-209ENST00000397036 C7orf43Q8WVR3 580 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 DENND2AQ9ULE3 1009 aa16.45■□□□□ 0.22
MCF2L-209ENST00000397036 NSFL1CQ9UNZ2 370 aaKnown RBP16.45■□□□□ 0.22
MCF2L-209ENST00000397036 ZBTB7AO95365 584 aa16.44■□□□□ 0.22
MCF2L-209ENST00000397036 ZSCAN25Q6NSZ9 544 aa16.44■□□□□ 0.22
MCF2L-209ENST00000397036 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.22
MCF2L-209ENST00000397036 HELLSQ9NRZ9 838 aa16.44■□□□□ 0.22
MCF2L-209ENST00000397036 WTIPA6NIX2 430 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-209ENST00000397036 RNF113AO15541 343 aaKnown RBP16.43■□□□□ 0.22
MCF2L-209ENST00000397036 GYG1P46976 350 aa16.43■□□□□ 0.22
MCF2L-209ENST00000397036 CWC27Q6UX04 472 aaKnown RBP16.43■□□□□ 0.22
MCF2L-209ENST00000397036 VPS37DQ86XT2 251 aa16.43■□□□□ 0.22
MCF2L-209ENST00000397036 TBC1D16Q8TBP0 767 aa16.43■□□□□ 0.22
MCF2L-209ENST00000397036 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.43■□□□□ 0.22
MCF2L-209ENST00000397036 ANTXR1Q9H6X2 564 aa16.43■□□□□ 0.22
MCF2L-209ENST00000397036 NDUFB9Q9Y6M9 179 aa16.43■□□□□ 0.22
MCF2L-209ENST00000397036 A0A1B0GUL6 1792 aa16.43■□□□□ 0.22
MCF2L-209ENST00000397036 NMIQ13287 307 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-209ENST00000397036 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
MCF2L-209ENST00000397036 PRPF40BQ6NWY9 871 aaKnown RBP16.42■□□□□ 0.22
MCF2L-209ENST00000397036 MPNDQ8N594 471 aa16.42■□□□□ 0.22
MCF2L-209ENST00000397036 POLLQ9UGP5 575 aa16.42■□□□□ 0.22
MCF2L-209ENST00000397036 AKAP11Q9UKA4 1901 aa16.42■□□□□ 0.22
MCF2L-209ENST00000397036 LRRC37AA6NMS7 1700 aa16.41■□□□□ 0.22
MCF2L-209ENST00000397036 MED23Q9ULK4 1368 aa16.41■□□□□ 0.22
MCF2L-209ENST00000397036 UFL1O94874 794 aa16.41■□□□□ 0.22
MCF2L-209ENST00000397036 CHRNA5P30532 468 aa16.41■□□□□ 0.22
MCF2L-209ENST00000397036 UBE3CQ15386 1083 aa16.41■□□□□ 0.22
MCF2L-209ENST00000397036 MCMDC2Q4G0Z9 681 aa16.41■□□□□ 0.22
MCF2L-209ENST00000397036 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
MCF2L-209ENST00000397036 IL17RAQ96F46 866 aa16.41■□□□□ 0.22
MCF2L-209ENST00000397036 RTFDC1Q9BY42 306 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-209ENST00000397036 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-209ENST00000397036 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
MCF2L-209ENST00000397036 KCNA3P22001 575 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 PI16Q6UXB8 463 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 KIAA1211Q6ZU35 1233 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 ZNF804AQ7Z570 1209 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 TXNRD3Q86VQ6 643 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 IL27Q8NEV9 243 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 FAM227BQ96M60 508 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 A0A0D9SFI3 127 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 IL1R1P14778 569 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 KLRK1P26718 216 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 MAP3K12Q12852 859 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 DPP8Q6V1X1 898 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-209ENST00000397036 LSG1Q9H089 658 aaKnown RBP16.4■□□□□ 0.22
MCF2L-209ENST00000397036 IL25Q9H293 177 aa16.4■□□□□ 0.22
MCF2L-209ENST00000397036 PIH1D3Q9NQM4 214 aaKnown RBP16.4■□□□□ 0.22
MCF2L-209ENST00000397036 COL11A2P13942 1736 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms