RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SLIT2O94813 1529 aa19.62■□□□□ 0.73
TRIM39-205ENST00000396551 HMGB1P09429 215 aaKnown RBP19.62■□□□□ 0.73
TRIM39-205ENST00000396551 PI16Q6UXB8 463 aa19.62■□□□□ 0.73
TRIM39-205ENST00000396551 AGXT2Q9BYV1 514 aa19.62■□□□□ 0.73
TRIM39-205ENST00000396551 KRT85P78386 507 aa19.61■□□□□ 0.73
TRIM39-205ENST00000396551 ZSCAN30Q86W11 494 aa19.61■□□□□ 0.73
TRIM39-205ENST00000396551 IRS4O14654 1257 aaPredicted RBP19.61■□□□□ 0.73
TRIM39-205ENST00000396551 PFKFB2O60825 505 aa19.61■□□□□ 0.73
TRIM39-205ENST00000396551 ATP2B3Q16720 1220 aa19.61■□□□□ 0.73
TRIM39-205ENST00000396551 MYO5AQ9Y4I1 1855 aaKnown RBP19.6■□□□□ 0.73
TRIM39-205ENST00000396551 UBN2Q6ZU65 1347 aa19.6■□□□□ 0.73
TRIM39-205ENST00000396551 APOBRQ0VD83 1088 aa19.6■□□□□ 0.73
TRIM39-205ENST00000396551 METTL24Q5JXM2 366 aa19.6■□□□□ 0.73
TRIM39-205ENST00000396551 LDHAL6AQ6ZMR3 332 aa19.6■□□□□ 0.73
TRIM39-205ENST00000396551 SMARCC2Q8TAQ2 1214 aa19.6■□□□□ 0.73
TRIM39-205ENST00000396551 TBC1D2BQ9UPU7 963 aa19.6■□□□□ 0.73
TRIM39-205ENST00000396551 LETM1O95202 739 aaPredicted RBP19.59■□□□□ 0.73
TRIM39-205ENST00000396551 HS1BP3Q53T59 392 aa19.59■□□□□ 0.73
TRIM39-205ENST00000396551 VGLL2Q8N8G2 317 aa19.59■□□□□ 0.73
TRIM39-205ENST00000396551 FUCA2Q9BTY2 467 aa19.59■□□□□ 0.73
TRIM39-205ENST00000396551 TRMT112Q9UI30 125 aaKnown RBP19.59■□□□□ 0.73
TRIM39-205ENST00000396551 ELP1O95163 1332 aa19.59■□□□□ 0.73
TRIM39-205ENST00000396551 ABCC12Q96J65 1359 aa19.59■□□□□ 0.73
TRIM39-205ENST00000396551 DZIP3Q86Y13 1208 aaKnown RBP19.59■□□□□ 0.73
TRIM39-205ENST00000396551 DDX11Q96FC9 970 aa19.59■□□□□ 0.73
TRIM39-205ENST00000396551 ANKRD18BA2A2Z9 1011 aa19.59■□□□□ 0.73
TRIM39-205ENST00000396551 CTDNEP1O95476 244 aa19.59■□□□□ 0.73
TRIM39-205ENST00000396551 IL6STP40189 918 aaPredicted RBP19.59■□□□□ 0.73
TRIM39-205ENST00000396551 FGD1P98174 961 aa19.59■□□□□ 0.73
TRIM39-205ENST00000396551 NRAPQ86VF7 1730 aa19.58■□□□□ 0.73
TRIM39-205ENST00000396551 MYH15Q9Y2K3 1946 aa19.58■□□□□ 0.73
TRIM39-205ENST00000396551 MCAMP43121 646 aa19.58■□□□□ 0.73
TRIM39-205ENST00000396551 RESTQ13127 1097 aa19.58■□□□□ 0.73
TRIM39-205ENST00000396551 WASHC4Q2M389 1173 aa19.58■□□□□ 0.73
TRIM39-205ENST00000396551 GIMAP6Q6P9H5 292 aa19.58■□□□□ 0.73
TRIM39-205ENST00000396551 NSUN7Q8NE18 718 aaKnown RBP19.58■□□□□ 0.73
TRIM39-205ENST00000396551 ERVV-1B6SEH8 477 aa19.58■□□□□ 0.72
TRIM39-205ENST00000396551 ZFYP08048 801 aaPredicted RBP19.58■□□□□ 0.72
TRIM39-205ENST00000396551 CHST3Q7LGC8 479 aa19.58■□□□□ 0.72
TRIM39-205ENST00000396551 PUS7LQ9H0K6 701 aaKnown RBP19.58■□□□□ 0.72
TRIM39-205ENST00000396551 TFIP11Q9UBB9 837 aaKnown RBP19.58■□□□□ 0.72
TRIM39-205ENST00000396551 ZNF34Q8IZ26 560 aa19.57■□□□□ 0.72
TRIM39-205ENST00000396551 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.57■□□□□ 0.72
TRIM39-205ENST00000396551 LRP5O75197 1615 aa19.57■□□□□ 0.72
TRIM39-205ENST00000396551 CNNM1Q9NRU3 951 aa19.57■□□□□ 0.72
TRIM39-205ENST00000396551 A0A0U1RQG5 324 aaPredicted RBP19.57■□□□□ 0.72
TRIM39-205ENST00000396551 PDE8AO60658 829 aa19.57■□□□□ 0.72
TRIM39-205ENST00000396551 LRRFIP1Q32MZ4 808 aaKnown RBP19.57■□□□□ 0.72
TRIM39-205ENST00000396551 APPBP2Q92624 585 aa19.57■□□□□ 0.72
TRIM39-205ENST00000396551 LLPHQ9BRT6 129 aaKnown RBP19.57■□□□□ 0.72
TRIM39-205ENST00000396551 DDX60Q8IY21 1712 aaKnown RBP19.56■□□□□ 0.72
TRIM39-205ENST00000396551 HCLS1P14317 486 aaPredicted RBP19.56■□□□□ 0.72
TRIM39-205ENST00000396551 LIG1P18858 919 aa19.56■□□□□ 0.72
TRIM39-205ENST00000396551 FAM184AQ8NB25 1140 aa19.56■□□□□ 0.72
TRIM39-205ENST00000396551 LEO1Q8WVC0 666 aaPredicted RBP19.55■□□□□ 0.72
TRIM39-205ENST00000396551 CCT2P78371 535 aaKnown RBP19.55■□□□□ 0.72
TRIM39-205ENST00000396551 ARAP2Q8WZ64 1704 aa19.55■□□□□ 0.72
TRIM39-205ENST00000396551 FGAP02671 866 aa19.55■□□□□ 0.72
TRIM39-205ENST00000396551 HAND2P61296 217 aa19.55■□□□□ 0.72
TRIM39-205ENST00000396551 SCAND2PQ9GZW5 306 aaPredicted RBP19.55■□□□□ 0.72
TRIM39-205ENST00000396551 NCOA5Q9HCD5 579 aaKnown RBP19.55■□□□□ 0.72
TRIM39-205ENST00000396551 NOL7Q9UMY1 257 aaKnown RBP19.55■□□□□ 0.72
TRIM39-205ENST00000396551 PTPDC1A2A3K4 754 aa19.54■□□□□ 0.72
TRIM39-205ENST00000396551 PDIA3P30101 505 aaKnown RBP19.54■□□□□ 0.72
TRIM39-205ENST00000396551 UVSSAQ2YD98 709 aa19.54■□□□□ 0.72
TRIM39-205ENST00000396551 INTS5Q6P9B9 1019 aaKnown RBP19.54■□□□□ 0.72
TRIM39-205ENST00000396551 SPATA32Q96LK8 384 aa19.54■□□□□ 0.72
TRIM39-205ENST00000396551 GPHNQ9NQX3 736 aaPredicted RBP19.54■□□□□ 0.72
TRIM39-205ENST00000396551 SALL1Q9NSC2 1324 aa19.54■□□□□ 0.72
TRIM39-205ENST00000396551 PDE8BO95263 885 aa19.54■□□□□ 0.72
TRIM39-205ENST00000396551 EIF5P55010 431 aaKnown RBP19.54■□□□□ 0.72
TRIM39-205ENST00000396551 ZNF512BQ96KM6 892 aaPredicted RBP19.54■□□□□ 0.72
TRIM39-205ENST00000396551 SPATA31A1Q5TZJ5 1347 aa19.54■□□□□ 0.72
TRIM39-205ENST00000396551 PHLPP1O60346 1717 aa19.53■□□□□ 0.72
TRIM39-205ENST00000396551 RREB1Q92766 1687 aa19.53■□□□□ 0.72
TRIM39-205ENST00000396551 GPAA1O43292 621 aa19.53■□□□□ 0.72
TRIM39-205ENST00000396551 CTNNA3Q9UI47 895 aa19.53■□□□□ 0.72
TRIM39-205ENST00000396551 MYH14Q7Z406 1995 aaKnown RBP19.53■□□□□ 0.72
TRIM39-205ENST00000396551 H3BQV1 296 aa19.53■□□□□ 0.72
TRIM39-205ENST00000396551 IFFO2Q5TF58 517 aa19.53■□□□□ 0.72
TRIM39-205ENST00000396551 FBXL16Q8N461 479 aa19.53■□□□□ 0.72
TRIM39-205ENST00000396551 ZNF274Q96GC6 653 aaPredicted RBP19.53■□□□□ 0.72
TRIM39-205ENST00000396551 PIH1D3Q9NQM4 214 aaKnown RBP19.53■□□□□ 0.72
TRIM39-205ENST00000396551 ADAMTS2O95450 1211 aa19.52■□□□□ 0.72
TRIM39-205ENST00000396551 KLHL34Q8N239 644 aa19.52■□□□□ 0.72
TRIM39-205ENST00000396551 PGBD1Q96JS3 809 aa19.52■□□□□ 0.72
TRIM39-205ENST00000396551 MSNP26038 577 aaKnown RBP19.52■□□□□ 0.72
TRIM39-205ENST00000396551 ADD2P35612 726 aa19.52■□□□□ 0.72
TRIM39-205ENST00000396551 PHKA1P46020 1223 aa19.52■□□□□ 0.72
TRIM39-205ENST00000396551 IMMTQ16891 758 aaKnown RBP19.52■□□□□ 0.72
TRIM39-205ENST00000396551 SUSD4Q5VX71 490 aa19.52■□□□□ 0.72
TRIM39-205ENST00000396551 ACSBG1Q96GR2 724 aa19.52■□□□□ 0.72
TRIM39-205ENST00000396551 FOSBP53539 338 aa19.51■□□□□ 0.71
TRIM39-205ENST00000396551 EVCP57679 992 aa19.51■□□□□ 0.71
TRIM39-205ENST00000396551 DDB1Q16531 1140 aa19.51■□□□□ 0.71
TRIM39-205ENST00000396551 MB21D2Q8IYB1 491 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-205ENST00000396551 ZSCAN16Q9H4T2 348 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-205ENST00000396551 ATRNO75882 1429 aa19.51■□□□□ 0.71
TRIM39-205ENST00000396551 PPFIA3O75145 1194 aa19.51■□□□□ 0.71
TRIM39-205ENST00000396551 HMGN5P82970 282 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms