RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 TBC1D9BQ66K14 1250 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 ZNF772Q68DY9 489 aaPredicted RBP17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 ZDHHC9Q9Y397 364 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 MAST3O60307 1309 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 SNED1Q8TER0 1413 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 ADD2P35612 726 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 TIMM10P62072 90 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 BRD1O95696 1058 aa17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 MTA3Q9BTC8 594 aa17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 NIP7Q9Y221 180 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 PSMA5P28066 241 aa17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 ADORA1P30542 326 aa17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 LDHAL6AQ6ZMR3 332 aa17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 ARHGEF1Q92888 912 aaKnown RBP17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
CDC42SE2-202ENST00000395246 IFIT1P09914 478 aaKnown RBP17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 RPS6KB1P23443 525 aa17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 MCM4P33991 863 aa17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 NT5C2P49902 561 aa17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 ST3GAL1Q11201 340 aa17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 TMEM87AQ8NBN3 555 aa17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 APPBP2Q92624 585 aa17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 MAP4K4O95819 1239 aaPredicted RBP17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 HMGB1P09429 215 aaKnown RBP17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 HOXA10P31260 410 aaPredicted RBP17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 RBM6P78332 1123 aaKnown RBP17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 RNF20Q5VTR2 975 aa17.04■□□□□ 0.32
CDC42SE2-202ENST00000395246 GPTP24298 496 aa17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 ANKRD1Q15327 319 aa17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 ZSCAN25Q6NSZ9 544 aa17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 KIAA1211Q6ZU35 1233 aa17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 QTRT2Q9H974 415 aaKnown RBP17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 LIMCH1Q9UPQ0 1083 aa17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 SCARF1Q14162 830 aa17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 ERFEQ4G0M1 354 aa17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 CCDC102BQ68D86 513 aa17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 RTCBQ9Y3I0 505 aaKnown RBP17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
CDC42SE2-202ENST00000395246 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.32
CDC42SE2-202ENST00000395246 C10orf71Q711Q0 1435 aa17.02■□□□□ 0.32
CDC42SE2-202ENST00000395246 ADCK5Q3MIX3 580 aa17.02■□□□□ 0.32
CDC42SE2-202ENST00000395246 TNPO1Q92973 898 aaKnown RBP17.02■□□□□ 0.32
CDC42SE2-202ENST00000395246 TOB2Q14106 344 aaPredicted RBP17.02■□□□□ 0.31
CDC42SE2-202ENST00000395246 DDX11L8A8MPP1 907 aa17.01■□□□□ 0.31
CDC42SE2-202ENST00000395246 HSPD1P10809 573 aaKnown RBP17.01■□□□□ 0.31
CDC42SE2-202ENST00000395246 NEK4P51957 841 aa17.01■□□□□ 0.31
CDC42SE2-202ENST00000395246 RTL5Q5HYW3 569 aaPredicted RBP17.01■□□□□ 0.31
CDC42SE2-202ENST00000395246 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
CDC42SE2-202ENST00000395246 PROM2Q8N271 834 aa17.01■□□□□ 0.31
CDC42SE2-202ENST00000395246 KAT6BQ8WYB5 2073 aa17.01■□□□□ 0.31
CDC42SE2-202ENST00000395246 GREB1LQ9C091 1923 aaPredicted RBP17.01■□□□□ 0.31
CDC42SE2-202ENST00000395246 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
CDC42SE2-202ENST00000395246 BRCA1P38398 1863 aaKnown RBP17■□□□□ 0.31
CDC42SE2-202ENST00000395246 FGRP09769 529 aa17■□□□□ 0.31
CDC42SE2-202ENST00000395246 SLC5A1P13866 664 aa17■□□□□ 0.31
CDC42SE2-202ENST00000395246 AK2P54819 239 aa17■□□□□ 0.31
CDC42SE2-202ENST00000395246 METTL24Q5JXM2 366 aa17■□□□□ 0.31
CDC42SE2-202ENST00000395246 OSBP2Q969R2 916 aa17■□□□□ 0.31
CDC42SE2-202ENST00000395246 M0R2C6 588 aa17■□□□□ 0.31
CDC42SE2-202ENST00000395246 CYP21A2P08686 494 aa17■□□□□ 0.31
CDC42SE2-202ENST00000395246 PODXL2Q9NZ53 605 aa17■□□□□ 0.31
CDC42SE2-202ENST00000395246 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
CDC42SE2-202ENST00000395246 EDC3Q96F86 508 aaKnown RBP16.99■□□□□ 0.31
CDC42SE2-202ENST00000395246 TTC39AQ5SRH9 613 aa16.99■□□□□ 0.31
CDC42SE2-202ENST00000395246 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 GYS1P13807 737 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 ZKSCAN1P17029 563 aaPredicted RBP16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 CHRNDQ07001 517 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 ANAPC4Q9UJX5 808 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 MINPP1Q9UNW1 487 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 CYP46A1Q9Y6A2 500 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 ANKRD2Q9GZV1 360 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 ISY1Q9ULR0 285 aaKnown RBP16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 ZAP70P43403 619 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 TMC4Q7Z404 712 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 SMARCC2Q8TAQ2 1214 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 LLPHQ9BRT6 129 aaKnown RBP16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
CDC42SE2-202ENST00000395246 GOLIM4O00461 696 aa16.97■□□□□ 0.31
CDC42SE2-202ENST00000395246 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-202ENST00000395246 PRPF40BQ6NWY9 871 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-202ENST00000395246 STOX1Q6ZVD7 989 aa16.97■□□□□ 0.31
CDC42SE2-202ENST00000395246 SPATA5Q8NB90 893 aa16.97■□□□□ 0.31
CDC42SE2-202ENST00000395246 TRAPPC3LQ5T215 181 aa16.97■□□□□ 0.31
CDC42SE2-202ENST00000395246 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDC42SE2-202ENST00000395246 PIH1D3Q9NQM4 214 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-202ENST00000395246 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
CDC42SE2-202ENST00000395246 TPTE2Q6XPS3 522 aa16.96■□□□□ 0.31
CDC42SE2-202ENST00000395246 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.31
CDC42SE2-202ENST00000395246 NBPF3Q9H094 633 aa16.96■□□□□ 0.31
CDC42SE2-202ENST00000395246 SKOR2Q2VWA4 1001 aaPredicted RBP16.96■□□□□ 0.31
CDC42SE2-202ENST00000395246 MEX3CQ5U5Q3 659 aaKnown RBP16.96■□□□□ 0.31
CDC42SE2-202ENST00000395246 GIMAP6Q6P9H5 292 aa16.96■□□□□ 0.31
CDC42SE2-202ENST00000395246 SETDB2Q96T68 719 aa16.96■□□□□ 0.31
CDC42SE2-202ENST00000395246 CNNM1Q9NRU3 951 aa16.96■□□□□ 0.31
CDC42SE2-202ENST00000395246 GNPATO15228 680 aa16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 PDRG1Q9NUG6 133 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms