RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 BRINP3Q76B58 766 aa13.55□□□□□ -0.24
UBE2D3-209ENST00000394804 NRKQ7Z2Y5 1582 aa13.55□□□□□ -0.24
UBE2D3-209ENST00000394804 CCDC66A2RUB6 948 aa13.55□□□□□ -0.24
UBE2D3-209ENST00000394804 WASF1Q92558 559 aa13.55□□□□□ -0.24
UBE2D3-209ENST00000394804 NACAP1Q9BZK3 213 aa13.55□□□□□ -0.24
UBE2D3-209ENST00000394804 RNF113AO15541 343 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 NAA16Q6N069 864 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 CHST3Q7LGC8 479 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 TSC1Q92574 1164 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 UBXN4Q92575 508 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 AIDAQ96BJ3 306 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 DCAF5Q96JK2 942 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 SLC52A2Q9HAB3 445 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 STRN4Q9NRL3 753 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 TLR7Q9NYK1 1049 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 NDUFB9Q9Y6M9 179 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 ANKARQ7Z5J8 1434 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 SALL3Q9BXA9 1300 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 RAB11FIP4Q86YS3 637 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 TAF5LO75529 589 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
UBE2D3-209ENST00000394804 NR1I2O75469 434 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 MRVI1Q9Y6F6 885 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 SPTLC2O15270 562 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 GOLGA6L1Q8N7Z2 621 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 ZNF496Q96IT1 587 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 PYCARDQ9ULZ3 195 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 RPAP1Q9BWH6 1393 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 SASH1O94885 1247 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 TOP1P11387 765 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 FILIP1LQ4L180 1135 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 PRC1O43663 620 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 PLBD2Q8NHP8 589 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 KIAA1524Q8TCG1 905 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
UBE2D3-209ENST00000394804 TIMM10P62072 90 aa13.52□□□□□ -0.24
UBE2D3-209ENST00000394804 IL25Q9H293 177 aa13.52□□□□□ -0.24
UBE2D3-209ENST00000394804 COPRSQ9NQ92 184 aa13.52□□□□□ -0.24
UBE2D3-209ENST00000394804 ZSCAN12O43309 604 aa13.52□□□□□ -0.25
UBE2D3-209ENST00000394804 NCOA5Q9HCD5 579 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-209ENST00000394804 ZHX1Q9UKY1 873 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-209ENST00000394804 SYKP43405 635 aa13.52□□□□□ -0.25
UBE2D3-209ENST00000394804 METAP2P50579 478 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBE2D3-209ENST00000394804 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-209ENST00000394804 VPS37DQ86XT2 251 aa13.52□□□□□ -0.25
UBE2D3-209ENST00000394804 CNNM3Q8NE01 707 aa13.52□□□□□ -0.25
UBE2D3-209ENST00000394804 C1orf167Q5SNV9 1468 aa13.52□□□□□ -0.25
UBE2D3-209ENST00000394804 GOLGA8AA7E2F4 631 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 STARD3NLO95772 234 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 TDO2P48775 406 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 IARSP41252 1262 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 BRAPQ7Z569 592 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 MICU3Q86XE3 530 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 NUP133Q8WUM0 1156 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 NAPBQ9H115 298 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 KNDC1Q76NI1 1749 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 MST1RQ04912 1400 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 USP42Q9H9J4 1324 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
UBE2D3-209ENST00000394804 A0A1B0GVL5 298 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 PRAMEF22A3QJZ6 481 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 EYA2O00167 538 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 URI1O94763 535 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 LRMPQ12912 555 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 LDHAL6AQ6ZMR3 332 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 PPFIBP1Q86W92 1011 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 TDRD7Q8NHU6 1098 aaKnown RBP13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 SEC62Q99442 399 aaKnown RBP13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 FEZ1Q99689 392 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 IPO7O95373 1038 aaKnown RBP13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 STK11IPQ8N1F8 1099 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 MPHOSPH8Q99549 860 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 ALG1Q9BT22 464 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 DSCC1Q9BVC3 393 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 ARHGEF25Q86VW2 580 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 HAUS7Q99871 368 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 TMOD3Q9NYL9 352 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 A0A1B0GUL7 405 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 PFKFB2O60825 505 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 SLU7O95391 586 aaKnown RBP13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 CCDC102BQ68D86 513 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 TMCO3Q6UWJ1 677 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 SMARCE1Q969G3 411 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 UBAC1Q9BSL1 405 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 SLC12A7Q9Y666 1083 aa13.5□□□□□ -0.25
UBE2D3-209ENST00000394804 ADCY9O60503 1353 aa13.49□□□□□ -0.25
UBE2D3-209ENST00000394804 ANKRD18BA2A2Z9 1011 aa13.49□□□□□ -0.25
UBE2D3-209ENST00000394804 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-209ENST00000394804 ATP2B3Q16720 1220 aa13.49□□□□□ -0.25
UBE2D3-209ENST00000394804 GTPBP4Q9BZE4 634 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-209ENST00000394804 IFNKQ9P0W0 207 aa13.49□□□□□ -0.25
UBE2D3-209ENST00000394804 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
UBE2D3-209ENST00000394804 LMOD1P29536 600 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms