RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 LLPHQ9BRT6 129 aaKnown RBP16.96■□□□□ 0.31
MKS1-203ENST00000393120 MROH5Q6ZUA9 1318 aa16.96■□□□□ 0.31
MKS1-203ENST00000393120 GADD45BO75293 160 aaPredicted RBP16.96■□□□□ 0.3
MKS1-203ENST00000393120 PHF14O94880 888 aa16.96■□□□□ 0.3
MKS1-203ENST00000393120 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.3
MKS1-203ENST00000393120 PPP1R9BQ96SB3 815 aa16.96■□□□□ 0.3
MKS1-203ENST00000393120 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.3
MKS1-203ENST00000393120 TOM1O60784 492 aa16.95■□□□□ 0.3
MKS1-203ENST00000393120 CAMTA2O94983 1202 aa16.95■□□□□ 0.3
MKS1-203ENST00000393120 ITPK1Q13572 414 aa16.95■□□□□ 0.3
MKS1-203ENST00000393120 TTF1Q15361 905 aaPredicted RBP16.95■□□□□ 0.3
MKS1-203ENST00000393120 SUSD4Q5VX71 490 aa16.95■□□□□ 0.3
MKS1-203ENST00000393120 ZSCAN25Q6NSZ9 544 aa16.95■□□□□ 0.3
MKS1-203ENST00000393120 UTP14AQ9BVJ6 771 aaKnown RBP16.95■□□□□ 0.3
MKS1-203ENST00000393120 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.95■□□□□ 0.31e-6■■■■■ 38.5
MKS1-203ENST00000393120 LRP5O75197 1615 aa16.95■□□□□ 0.3
MKS1-203ENST00000393120 E7EWF7 191 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 PFKFB2O60825 505 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 FOXD4L6Q3SYB3 417 aaPredicted RBP16.94■□□□□ 0.3
MKS1-203ENST00000393120 FOXD4L3Q6VB84 417 aaPredicted RBP16.94■□□□□ 0.3
MKS1-203ENST00000393120 ANP32BQ92688 251 aaKnown RBP16.94■□□□□ 0.3
MKS1-203ENST00000393120 CHMP4CQ96CF2 233 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 ACSBG1Q96GR2 724 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 RBSNQ9H1K0 784 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 RTL9Q8NET4 1388 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 MYH3P11055 1940 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 SYCE3A1L190 88 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 UQCRFS1P1P0C7P4 283 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 FGFR2P21802 821 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
MKS1-203ENST00000393120 MCAMP43121 646 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 PUM3Q15397 648 aaKnown RBP16.94■□□□□ 0.3
MKS1-203ENST00000393120 LPIN2Q92539 896 aa16.94■□□□□ 0.3
MKS1-203ENST00000393120 VPS37CA5D8V6 355 aaPredicted RBP16.93■□□□□ 0.3
MKS1-203ENST00000393120 NUTM2BA6NNL0 878 aaPredicted RBP16.93■□□□□ 0.3
MKS1-203ENST00000393120 NUTM2EB1AL46 878 aaPredicted RBP16.93■□□□□ 0.3
MKS1-203ENST00000393120 LETM1O95202 739 aaPredicted RBP16.93■□□□□ 0.3
MKS1-203ENST00000393120 NUTM2AQ8IVF1 878 aaPredicted RBP16.93■□□□□ 0.3
MKS1-203ENST00000393120 BRF1Q92994 677 aa16.93■□□□□ 0.3
MKS1-203ENST00000393120 RGL2O15211 777 aa16.92■□□□□ 0.3
MKS1-203ENST00000393120 FOXP2O15409 715 aa16.92■□□□□ 0.3
MKS1-203ENST00000393120 DNM1Q05193 864 aaKnown RBP16.92■□□□□ 0.3
MKS1-203ENST00000393120 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
MKS1-203ENST00000393120 SMARCC2Q8TAQ2 1214 aa16.92■□□□□ 0.3
MKS1-203ENST00000393120 EVCP57679 992 aa16.92■□□□□ 0.3
MKS1-203ENST00000393120 UBE3CQ15386 1083 aa16.92■□□□□ 0.3
MKS1-203ENST00000393120 ZNF274Q96GC6 653 aaPredicted RBP16.92■□□□□ 0.3
MKS1-203ENST00000393120 ADD2P35612 726 aa16.91■□□□□ 0.3
MKS1-203ENST00000393120 FGD1P98174 961 aa16.91■□□□□ 0.3
MKS1-203ENST00000393120 STK3Q13188 491 aa16.91■□□□□ 0.3
MKS1-203ENST00000393120 IMMTQ16891 758 aaKnown RBP16.91■□□□□ 0.3
MKS1-203ENST00000393120 CCDC183Q5T5S1 534 aa16.91■□□□□ 0.3
MKS1-203ENST00000393120 CCDC102BQ68D86 513 aa16.91■□□□□ 0.3
MKS1-203ENST00000393120 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
MKS1-203ENST00000393120 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
MKS1-203ENST00000393120 RTN4Q9NQC3 1192 aaKnown RBP16.91■□□□□ 0.3
MKS1-203ENST00000393120 ELP1O95163 1332 aa16.91■□□□□ 0.3
MKS1-203ENST00000393120 ATRNO75882 1429 aa16.91■□□□□ 0.3
MKS1-203ENST00000393120 FGAP02671 866 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 KRT85P78386 507 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 SCRN1Q12765 414 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 PUS7LQ9H0K6 701 aaKnown RBP16.9■□□□□ 0.3
MKS1-203ENST00000393120 ZNF831Q5JPB2 1677 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 FIBPO43427 364 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 NTSR2O95665 410 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 HCLS1P14317 486 aaPredicted RBP16.9■□□□□ 0.3
MKS1-203ENST00000393120 CCDC152Q4G0S7 254 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 PI16Q6UXB8 463 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 ZNF652Q9Y2D9 606 aa16.9■□□□□ 0.3
MKS1-203ENST00000393120 HMGN5P82970 282 aaKnown RBP16.89■□□□□ 0.29
MKS1-203ENST00000393120 VPS72Q15906 364 aa16.89■□□□□ 0.29
MKS1-203ENST00000393120 TTLL5Q6EMB2 1281 aa16.89■□□□□ 0.29
MKS1-203ENST00000393120 TSPY26PQ9H489 355 aa16.89■□□□□ 0.29
MKS1-203ENST00000393120 WDR19Q8NEZ3 1342 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 A0A0G2JLW4 131 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 GPAA1O43292 621 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 SLC5A1P13866 664 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 PHKA1P46020 1223 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 MPHOSPH8Q99549 860 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 SCAND2PQ9GZW5 306 aaPredicted RBP16.88■□□□□ 0.29
MKS1-203ENST00000393120 NIP7Q9Y221 180 aaKnown RBP eCLIP16.88■□□□□ 0.29
MKS1-203ENST00000393120 AKAP11Q9UKA4 1901 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 JAK2O60674 1132 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 DTNBO60941 627 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 SLC9C2Q5TAH2 1124 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 ZSCAN16Q9H4T2 348 aaPredicted RBP16.88■□□□□ 0.29
MKS1-203ENST00000393120 PIH1D3Q9NQM4 214 aaKnown RBP16.88■□□□□ 0.29
MKS1-203ENST00000393120 KIF3AQ9Y496 699 aa16.88■□□□□ 0.29
MKS1-203ENST00000393120 A0A0G2JS52 829 aa16.87■□□□□ 0.29
MKS1-203ENST00000393120 KCNQ2O43526 872 aa16.87■□□□□ 0.29
MKS1-203ENST00000393120 PDIA3P30101 505 aaKnown RBP16.87■□□□□ 0.29
MKS1-203ENST00000393120 APOBRQ0VD83 1088 aa16.87■□□□□ 0.29
MKS1-203ENST00000393120 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
MKS1-203ENST00000393120 NSUN7Q8NE18 718 aaKnown RBP16.87■□□□□ 0.29
MKS1-203ENST00000393120 TRIM44Q96DX7 344 aaPredicted RBP16.87■□□□□ 0.29
MKS1-203ENST00000393120 PDLIM2Q96JY6 352 aa16.87■□□□□ 0.29
MKS1-203ENST00000393120 TCHHQ07283 1943 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms